RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 HYDINQ4G0P3 5121 aa9.79□□□□□ -0.84
PPFIA1-202ENST00000389547 KRTAP4-5Q9BYR2 181 aa9.76□□□□□ -0.85
PPFIA1-202ENST00000389547 R4GN34 69 aa9.76□□□□□ -0.85
PPFIA1-202ENST00000389547 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
PPFIA1-202ENST00000389547 DNAH8Q96JB1 4490 aa9.74□□□□□ -0.85
PPFIA1-202ENST00000389547 M0QZ58 72 aa9.73□□□□□ -0.85
PPFIA1-202ENST00000389547 KIAA1109Q2LD37 5005 aa9.72□□□□□ -0.85
PPFIA1-202ENST00000389547 CAMK2N1Q7Z7J9 78 aa9.72□□□□□ -0.85
PPFIA1-202ENST00000389547 M0R2T5 61 aa9.71□□□□□ -0.85
PPFIA1-202ENST00000389547 KRTAP3-1Q9BYR8 98 aa9.69□□□□□ -0.86
PPFIA1-202ENST00000389547 SACSQ9NZJ4 4579 aa9.68□□□□□ -0.86
PPFIA1-202ENST00000389547 MT1HL1P0DM35 61 aa9.65□□□□□ -0.87
PPFIA1-202ENST00000389547 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
PPFIA1-202ENST00000389547 FRAS1Q86XX4 4008 aa9.6□□□□□ -0.87
PPFIA1-202ENST00000389547 HECTD4Q9Y4D8 3996 aa9.59□□□□□ -0.87
PPFIA1-202ENST00000389547 PKHD1P08F94 4074 aa9.59□□□□□ -0.87
PPFIA1-202ENST00000389547 PLAC4Q8WY50 150 aa9.59□□□□□ -0.87
PPFIA1-202ENST00000389547 RYR3Q15413 4870 aa9.58□□□□□ -0.88
PPFIA1-202ENST00000389547 VPS13BQ7Z7G8 4022 aa9.58□□□□□ -0.88
PPFIA1-202ENST00000389547 RYR1P21817 5038 aa9.56□□□□□ -0.88
PPFIA1-202ENST00000389547 KRTAP13-4Q3LI77 160 aa9.54□□□□□ -0.88
PPFIA1-202ENST00000389547 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
PPFIA1-202ENST00000389547 KRTAP15-1Q3LI76 137 aa9.5□□□□□ -0.89
PPFIA1-202ENST00000389547 APOBP04114 4563 aaKnown RBP9.49□□□□□ -0.89
PPFIA1-202ENST00000389547 FAT2Q9NYQ8 4349 aa9.49□□□□□ -0.89
PPFIA1-202ENST00000389547 RYR2Q92736 4967 aa9.49□□□□□ -0.89
PPFIA1-202ENST00000389547 MYCBP2O75592 4640 aa9.44□□□□□ -0.9
PPFIA1-202ENST00000389547 LRP1Q07954 4544 aaKnown RBP9.43□□□□□ -0.9
PPFIA1-202ENST00000389547 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
PPFIA1-202ENST00000389547 KRTAP17-1Q9BYP8 105 aa9.36□□□□□ -0.91
PPFIA1-202ENST00000389547 KRTAP12-1P59990 96 aa9.34□□□□□ -0.91
PPFIA1-202ENST00000389547 FAT3Q8TDW7 4589 aa9.3□□□□□ -0.92
PPFIA1-202ENST00000389547 PKD1P98161 4303 aa9.25□□□□□ -0.93
PPFIA1-202ENST00000389547 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
PPFIA1-202ENST00000389547 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
PPFIA1-202ENST00000389547 PP632Q6XCG6 107 aa9.07□□□□□ -0.96
PPFIA1-202ENST00000389547 HSPG2P98160 4391 aa9.07□□□□□ -0.96
PPFIA1-202ENST00000389547 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
PPFIA1-202ENST00000389547 HERC2O95714 4834 aa9.04□□□□□ -0.96
PPFIA1-202ENST00000389547 TNP1P09430 55 aa8.95□□□□□ -0.98
PPFIA1-202ENST00000389547 LRP2P98164 4655 aa8.9□□□□□ -0.98
PPFIA1-202ENST00000389547 KRTAP10-10P60014 251 aa8.83□□□□□ -1
PPFIA1-202ENST00000389547 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
PPFIA1-202ENST00000389547 BIRC6Q9NR09 4857 aa8.76□□□□□ -1.01
PPFIA1-202ENST00000389547 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.01
PPFIA1-202ENST00000389547 LPAP08519 4548 aa8.65□□□□□ -1.02
PPFIA1-202ENST00000389547 PKHD1L1Q86WI1 4243 aa8.61□□□□□ -1.03
PPFIA1-202ENST00000389547 TNXBP22105 4242 aa8.52□□□□□ -1.04
PPFIA1-202ENST00000389547 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
PPFIA1-202ENST00000389547 HERC1Q15751 4861 aa8.41□□□□□ -1.06
PPFIA1-202ENST00000389547 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
PPFIA1-202ENST00000389547 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
PPFIA1-202ENST00000389547 MUC2Q02817 5179 aa8.23□□□□□ -1.09
PPFIA1-202ENST00000389547 MT1HP80294 61 aa8.18□□□□□ -1.1
PPFIA1-202ENST00000389547 RNF213Q63HN8 5207 aa8.17□□□□□ -1.1
PPFIA1-202ENST00000389547 INE1O15225 51 aa8.13□□□□□ -1.11
PPFIA1-202ENST00000389547 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
PPFIA1-202ENST00000389547 MT2AP02795 61 aa7.99□□□□□ -1.13
PPFIA1-202ENST00000389547 FAT4Q6V0I7 4981 aa7.98□□□□□ -1.13
PPFIA1-202ENST00000389547 MT1FP04733 61 aa7.95□□□□□ -1.14
PPFIA1-202ENST00000389547 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
PPFIA1-202ENST00000389547 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
PPFIA1-202ENST00000389547 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
PPFIA1-202ENST00000389547 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
PPFIA1-202ENST00000389547 LCE3AQ5TA76 89 aa7.84□□□□□ -1.16
PPFIA1-202ENST00000389547 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
PPFIA1-202ENST00000389547 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
PPFIA1-202ENST00000389547 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.17
PPFIA1-202ENST00000389547 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
PPFIA1-202ENST00000389547 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
PPFIA1-202ENST00000389547 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
PPFIA1-202ENST00000389547 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
PPFIA1-202ENST00000389547 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
PPFIA1-202ENST00000389547 SPRR5A0A1B0GTR4 108 aa7.58□□□□□ -1.2
PPFIA1-202ENST00000389547 KRTAP9-3Q9BYQ3 159 aa7.39□□□□□ -1.23
PPFIA1-202ENST00000389547 MT1BP07438 61 aa7.38□□□□□ -1.23
PPFIA1-202ENST00000389547 KRTAP19-8Q3LI54 63 aa7.38□□□□□ -1.23
PPFIA1-202ENST00000389547 MT1XP80297 61 aa7.25□□□□□ -1.25
PPFIA1-202ENST00000389547 LCE2BO14633 110 aa7.25□□□□□ -1.25
PPFIA1-202ENST00000389547 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
PPFIA1-202ENST00000389547 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
PPFIA1-202ENST00000389547 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
PPFIA1-202ENST00000389547 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
PPFIA1-202ENST00000389547 USH2AO75445 5202 aa7.09□□□□□ -1.27
PPFIA1-202ENST00000389547 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
PPFIA1-202ENST00000389547 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
PPFIA1-202ENST00000389547 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
PPFIA1-202ENST00000389547 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
PPFIA1-202ENST00000389547 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.31
PPFIA1-202ENST00000389547 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
PPFIA1-202ENST00000389547 KMT2DO14686 5537 aa6.67□□□□□ -1.34
PPFIA1-202ENST00000389547 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
PPFIA1-202ENST00000389547 KRTAP19-6Q3LI70 58 aa6.59□□□□□ -1.35
PPFIA1-202ENST00000389547 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
PPFIA1-202ENST00000389547 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
PPFIA1-202ENST00000389547 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
PPFIA1-202ENST00000389547 KRTAP12-4P60329 112 aa6.44□□□□□ -1.38
PPFIA1-202ENST00000389547 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
PPFIA1-202ENST00000389547 MT1EP04732 61 aa6.39□□□□□ -1.39
PPFIA1-202ENST00000389547 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms