RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
SHOX-202ENST00000381575 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
SHOX-202ENST00000381575 NEBP20929 6669 aa6.25□□□□□ -1.41
SHOX-202ENST00000381575 CYP4F30PQ9H0H9 118 aa6.24□□□□□ -1.41
SHOX-202ENST00000381575 SCGB1A1P11684 91 aa6.22□□□□□ -1.41
SHOX-202ENST00000381575 LINC00643Q86TS7 51 aa6.21□□□□□ -1.41
SHOX-202ENST00000381575 MT-ATP8P03928 68 aa6.2□□□□□ -1.42
SHOX-202ENST00000381575 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
SHOX-202ENST00000381575 IMUPQ9GZP8 106 aa6.17□□□□□ -1.42
SHOX-202ENST00000381575 KMT2DO14686 5537 aa6.15□□□□□ -1.42
SHOX-202ENST00000381575 LOC101927531A0A1B0GV80 90 aa6.15□□□□□ -1.43
SHOX-202ENST00000381575 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
SHOX-202ENST00000381575 PCP4P48539 62 aa6.13□□□□□ -1.43
SHOX-202ENST00000381575 ATP5EP2Q5VTU8 51 aa6.13□□□□□ -1.43
SHOX-202ENST00000381575 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
SHOX-202ENST00000381575 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
SHOX-202ENST00000381575 H0Y9P7 68 aa6.09□□□□□ -1.43
SHOX-202ENST00000381575 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
SHOX-202ENST00000381575 HIST1H4AP62805 103 aaKnown RBP6.08□□□□□ -1.44
SHOX-202ENST00000381575 NDUFC1O43677 76 aa6.07□□□□□ -1.44
SHOX-202ENST00000381575 UQCRQO14949 82 aa6.06□□□□□ -1.44
SHOX-202ENST00000381575 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
SHOX-202ENST00000381575 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
SHOX-202ENST00000381575 H0YAA0 97 aa6.03□□□□□ -1.44
SHOX-202ENST00000381575 ATOX1O00244 68 aa6.02□□□□□ -1.45
SHOX-202ENST00000381575 ANAPC13Q9BS18 74 aa6.01□□□□□ -1.45
SHOX-202ENST00000381575 A8MUN3 132 aa5.99□□□□□ -1.45
SHOX-202ENST00000381575 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
SHOX-202ENST00000381575 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
SHOX-202ENST00000381575 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
SHOX-202ENST00000381575 MT1XP80297 61 aa5.96□□□□□ -1.45
SHOX-202ENST00000381575 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
SHOX-202ENST00000381575 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
SHOX-202ENST00000381575 P0C880 135 aa5.91□□□□□ -1.46
SHOX-202ENST00000381575 SMIM20Q8N5G0 67 aa5.91□□□□□ -1.46
SHOX-202ENST00000381575 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
SHOX-202ENST00000381575 SPRR2EP22531 72 aa5.9□□□□□ -1.47
SHOX-202ENST00000381575 SPRR2BP35325 72 aa5.9□□□□□ -1.47
SHOX-202ENST00000381575 SPRR2AP35326 72 aa5.9□□□□□ -1.47
SHOX-202ENST00000381575 SERP2Q8N6R1 65 aa5.9□□□□□ -1.47
SHOX-202ENST00000381575 OCR1Q9BZK8 76 aa5.89□□□□□ -1.47
SHOX-202ENST00000381575 COX7CP15954 63 aa5.88□□□□□ -1.47
SHOX-202ENST00000381575 MP68P56378 58 aa5.88□□□□□ -1.47
SHOX-202ENST00000381575 R4GN34 69 aa5.88□□□□□ -1.47
SHOX-202ENST00000381575 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
SHOX-202ENST00000381575 KRTAP2-3P0C7H8 128 aa5.86□□□□□ -1.47
SHOX-202ENST00000381575 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
SHOX-202ENST00000381575 KRTAP2-4Q9BYR9 128 aa5.86□□□□□ -1.47
SHOX-202ENST00000381575 M0QZ58 72 aa5.85□□□□□ -1.47
SHOX-202ENST00000381575 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
SHOX-202ENST00000381575 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
SHOX-202ENST00000381575 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
SHOX-202ENST00000381575 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
SHOX-202ENST00000381575 C20orf197Q8N268 126 aa5.79□□□□□ -1.48
SHOX-202ENST00000381575 DMAC1Q96GE9 116 aa5.79□□□□□ -1.48
SHOX-202ENST00000381575 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
SHOX-202ENST00000381575 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
SHOX-202ENST00000381575 H3BPC8 53 aa5.73□□□□□ -1.49
SHOX-202ENST00000381575 KRTAP10-7P60409 375 aaPredicted RBP5.71□□□□□ -1.5
SHOX-202ENST00000381575 SPRR2DP22532 72 aa5.69□□□□□ -1.5
SHOX-202ENST00000381575 TMEM258P61165 79 aa5.67□□□□□ -1.5
SHOX-202ENST00000381575 KRTAP2-2Q9BYT5 123 aa5.67□□□□□ -1.5
SHOX-202ENST00000381575 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
SHOX-202ENST00000381575 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
SHOX-202ENST00000381575 SNURFQ9Y675 71 aa5.66□□□□□ -1.5
SHOX-202ENST00000381575 H7BZZ5 65 aa5.64□□□□□ -1.51
SHOX-202ENST00000381575 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
SHOX-202ENST00000381575 ATP5EP56381 51 aaPredicted RBP5.6□□□□□ -1.51
SHOX-202ENST00000381575 ACYP2P14621 99 aa5.59□□□□□ -1.51
SHOX-202ENST00000381575 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
SHOX-202ENST00000381575 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
SHOX-202ENST00000381575 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
SHOX-202ENST00000381575 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
SHOX-202ENST00000381575 SPANXA2-OT1Q8N9U9 137 aa5.52□□□□□ -1.53
SHOX-202ENST00000381575 SERP1Q9Y6X1 66 aa5.51□□□□□ -1.53
SHOX-202ENST00000381575 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
SHOX-202ENST00000381575 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
SHOX-202ENST00000381575 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
SHOX-202ENST00000381575 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
SHOX-202ENST00000381575 COA5Q86WW8 74 aa5.31□□□□□ -1.56
SHOX-202ENST00000381575 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
SHOX-202ENST00000381575 A0A0D9SG42 100 aa5.29□□□□□ -1.56
SHOX-202ENST00000381575 MT1EP04732 61 aa5.29□□□□□ -1.56
SHOX-202ENST00000381575 LCE5AQ5TCM9 118 aa5.29□□□□□ -1.56
SHOX-202ENST00000381575 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
SHOX-202ENST00000381575 V9GYY9 64 aa5.26□□□□□ -1.57
SHOX-202ENST00000381575 Q1T7F1 81 aa5.25□□□□□ -1.57
SHOX-202ENST00000381575 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
SHOX-202ENST00000381575 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
SHOX-202ENST00000381575 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
SHOX-202ENST00000381575 GPR98Q8WXG9 6306 aa5.19□□□□□ -1.58
SHOX-202ENST00000381575 SEC61GP60059 68 aa5.17□□□□□ -1.58
SHOX-202ENST00000381575 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
SHOX-202ENST00000381575 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
SHOX-202ENST00000381575 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
SHOX-202ENST00000381575 A0A1B0GU33 70 aa5.13□□□□□ -1.59
SHOX-202ENST00000381575 PSPHP1O15172 72 aa5.09□□□□□ -1.59
SHOX-202ENST00000381575 MT1GP13640 62 aa5.09□□□□□ -1.59
SHOX-202ENST00000381575 PRR15LQ9BU68 103 aa5.09□□□□□ -1.59
SHOX-202ENST00000381575 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms