RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 KRTAP3-2Q9BYR7 98 aa2.28□□□□□ -2.05
PTPRD-203ENST00000381196 UNC80Q8N2C7 3258 aa2.27□□□□□ -2.05
PTPRD-203ENST00000381196 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
PTPRD-203ENST00000381196 COL6A3P12111 3177 aa2.27□□□□□ -2.05
PTPRD-203ENST00000381196 HUWE1Q7Z6Z7 4374 aaKnown RBP2.27□□□□□ -2.05
PTPRD-203ENST00000381196 PRKDCP78527 4128 aaKnown RBP2.26□□□□□ -2.05
PTPRD-203ENST00000381196 PKHD1P08F94 4074 aa2.24□□□□□ -2.05
PTPRD-203ENST00000381196 MYO15AQ9UKN7 3530 aa2.24□□□□□ -2.05
PTPRD-203ENST00000381196 SMG1Q96Q15 3661 aaKnown RBP2.24□□□□□ -2.05
PTPRD-203ENST00000381196 DYNC2H1Q8NCM8 4307 aaKnown RBP2.23□□□□□ -2.05
PTPRD-203ENST00000381196 SPEGQ15772 3267 aa2.22□□□□□ -2.05
PTPRD-203ENST00000381196 USH2AO75445 5202 aa2.22□□□□□ -2.05
PTPRD-203ENST00000381196 CUBNO60494 3623 aa2.21□□□□□ -2.06
PTPRD-203ENST00000381196 KRTAP3-3Q9BYR6 98 aa2.21□□□□□ -2.06
PTPRD-203ENST00000381196 KMT2AQ03164 3969 aa2.21□□□□□ -2.06
PTPRD-203ENST00000381196 ASPMQ8IZT6 3477 aa2.21□□□□□ -2.06
PTPRD-203ENST00000381196 DNHD1Q96M86 4753 aa2.2□□□□□ -2.06
PTPRD-203ENST00000381196 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
PTPRD-203ENST00000381196 KRTAP10-4P60372 401 aaPredicted RBP2.18□□□□□ -2.06
PTPRD-203ENST00000381196 MT1HL1P0DM35 61 aa2.18□□□□□ -2.06
PTPRD-203ENST00000381196 LOC400499M0QZD8 3231 aa2.18□□□□□ -2.06
PTPRD-203ENST00000381196 VPS13BQ7Z7G8 4022 aa2.18□□□□□ -2.06
PTPRD-203ENST00000381196 FRAS1Q86XX4 4008 aa2.17□□□□□ -2.06
PTPRD-203ENST00000381196 MUC3AQ02505 3323 aa2.17□□□□□ -2.06
PTPRD-203ENST00000381196 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
PTPRD-203ENST00000381196 KRTAP4-5Q9BYR2 181 aa2.16□□□□□ -2.06
PTPRD-203ENST00000381196 DNAH1Q9P2D7 4330 aa2.16□□□□□ -2.06
PTPRD-203ENST00000381196 KRTAP10-12P60413 245 aa2.14□□□□□ -2.07
PTPRD-203ENST00000381196 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
PTPRD-203ENST00000381196 SVEP1Q4LDE5 3571 aa2.13□□□□□ -2.07
PTPRD-203ENST00000381196 RELNP78509 3460 aa2.13□□□□□ -2.07
PTPRD-203ENST00000381196 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
PTPRD-203ENST00000381196 ZNF469Q96JG9 3925 aaPredicted RBP2.12□□□□□ -2.07
PTPRD-203ENST00000381196 PKHD1L1Q86WI1 4243 aa2.11□□□□□ -2.07
PTPRD-203ENST00000381196 ANK3Q12955 4377 aaKnown RBP2.1□□□□□ -2.07
PTPRD-203ENST00000381196 FLGP20930 4061 aaPredicted RBP2.1□□□□□ -2.07
PTPRD-203ENST00000381196 DCHS1Q96JQ0 3298 aa2.09□□□□□ -2.07
PTPRD-203ENST00000381196 CSMD3Q7Z407 3707 aa2.09□□□□□ -2.08
PTPRD-203ENST00000381196 FAT2Q9NYQ8 4349 aa2.09□□□□□ -2.08
PTPRD-203ENST00000381196 LORP23490 312 aaPredicted RBP2.08□□□□□ -2.08
PTPRD-203ENST00000381196 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
PTPRD-203ENST00000381196 KRTAP8-1Q8IUC2 63 aa2.08□□□□□ -2.08
PTPRD-203ENST00000381196 DNAH17Q9UFH2 4485 aa2.07□□□□□ -2.08
PTPRD-203ENST00000381196 DYNC1H1Q14204 4646 aaKnown RBP2.06□□□□□ -2.08
PTPRD-203ENST00000381196 FAT3Q8TDW7 4589 aa2.06□□□□□ -2.08
PTPRD-203ENST00000381196 DNAH10Q8IVF4 4471 aa2.06□□□□□ -2.08
PTPRD-203ENST00000381196 CSMD1Q96PZ7 3565 aa2.03□□□□□ -2.08
PTPRD-203ENST00000381196 DNAH2Q9P225 4427 aa2.03□□□□□ -2.09
PTPRD-203ENST00000381196 KRTAP10-5P60370 271 aa2.02□□□□□ -2.09
PTPRD-203ENST00000381196 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
PTPRD-203ENST00000381196 MUC2Q02817 5179 aa2.01□□□□□ -2.09
PTPRD-203ENST00000381196 VPS13DQ5THJ4 4388 aa2□□□□□ -2.09
PTPRD-203ENST00000381196 MT3P25713 68 aa2□□□□□ -2.09
PTPRD-203ENST00000381196 DNAH8Q96JB1 4490 aa1.98□□□□□ -2.09
PTPRD-203ENST00000381196 PKD1P98161 4303 aa1.98□□□□□ -2.09
PTPRD-203ENST00000381196 CSMD2Q7Z408 3487 aa1.98□□□□□ -2.09
PTPRD-203ENST00000381196 DNAH11Q96DT5 4516 aa1.98□□□□□ -2.09
PTPRD-203ENST00000381196 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
PTPRD-203ENST00000381196 DNAH9Q9NYC9 4486 aa1.97□□□□□ -2.09
PTPRD-203ENST00000381196 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
PTPRD-203ENST00000381196 STARD9Q9P2P6 4700 aa1.94□□□□□ -2.1
PTPRD-203ENST00000381196 LCE3AQ5TA76 89 aa1.94□□□□□ -2.1
PTPRD-203ENST00000381196 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
PTPRD-203ENST00000381196 PLECQ15149 4684 aaKnown RBP1.93□□□□□ -2.1
PTPRD-203ENST00000381196 MT1HP80294 61 aa1.93□□□□□ -2.1
PTPRD-203ENST00000381196 KRTAP10-7P60409 375 aaPredicted RBP1.92□□□□□ -2.1
PTPRD-203ENST00000381196 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
PTPRD-203ENST00000381196 MT2AP02795 61 aa1.9□□□□□ -2.11
PTPRD-203ENST00000381196 TNXBP22105 4242 aa1.9□□□□□ -2.11
PTPRD-203ENST00000381196 SACSQ9NZJ4 4579 aa1.88□□□□□ -2.11
PTPRD-203ENST00000381196 KRTAP19-8Q3LI54 63 aa1.87□□□□□ -2.11
PTPRD-203ENST00000381196 SPRR2EP22531 72 aa1.86□□□□□ -2.11
PTPRD-203ENST00000381196 SPRR2BP35325 72 aa1.86□□□□□ -2.11
PTPRD-203ENST00000381196 SPRR2AP35326 72 aa1.86□□□□□ -2.11
PTPRD-203ENST00000381196 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
PTPRD-203ENST00000381196 FAT1Q14517 4588 aa1.84□□□□□ -2.11
PTPRD-203ENST00000381196 APOBP04114 4563 aaKnown RBP1.83□□□□□ -2.12
PTPRD-203ENST00000381196 MT1FP04733 61 aa1.83□□□□□ -2.12
PTPRD-203ENST00000381196 KMT2DO14686 5537 aa1.83□□□□□ -2.12
PTPRD-203ENST00000381196 SPRR2DP22532 72 aa1.82□□□□□ -2.12
PTPRD-203ENST00000381196 HSPG2P98160 4391 aa1.82□□□□□ -2.12
PTPRD-203ENST00000381196 DNAH5Q8TE73 4624 aa1.81□□□□□ -2.12
PTPRD-203ENST00000381196 KRTAP19-5Q3LI72 72 aa1.77□□□□□ -2.13
PTPRD-203ENST00000381196 LCE2BO14633 110 aa1.77□□□□□ -2.13
PTPRD-203ENST00000381196 MDN1Q9NU22 5596 aa1.76□□□□□ -2.13
PTPRD-203ENST00000381196 LRP1Q07954 4544 aaKnown RBP1.76□□□□□ -2.13
PTPRD-203ENST00000381196 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
PTPRD-203ENST00000381196 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
PTPRD-203ENST00000381196 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
PTPRD-203ENST00000381196 KRTAP17-1Q9BYP8 105 aa1.72□□□□□ -2.13
PTPRD-203ENST00000381196 MT1EP04732 61 aa1.71□□□□□ -2.14
PTPRD-203ENST00000381196 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
PTPRD-203ENST00000381196 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
PTPRD-203ENST00000381196 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
PTPRD-203ENST00000381196 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
PTPRD-203ENST00000381196 KRTAP19-1Q8IUB9 90 aa1.7□□□□□ -2.14
PTPRD-203ENST00000381196 MT1LQ93083 61 aa1.69□□□□□ -2.14
PTPRD-203ENST00000381196 MT1XP80297 61 aa1.69□□□□□ -2.14
PTPRD-203ENST00000381196 KRTAP19-2Q3LHN2 52 aa1.69□□□□□ -2.14
PTPRD-203ENST00000381196 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms