RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 H0YAA0 97 aa10.44□□□□□ -0.74
EBF1-202ENST00000380654 PRAC1Q96KF2 57 aa10.43□□□□□ -0.74
EBF1-202ENST00000380654 RPL37P61927 97 aaKnown RBP10.41□□□□□ -0.74
EBF1-202ENST00000380654 XP32Q5T750 250 aa10.41□□□□□ -0.74
EBF1-202ENST00000380654 A0A1B0GU33 70 aa10.38□□□□□ -0.75
EBF1-202ENST00000380654 H1FX-AS1Q4G0G2 97 aa10.34□□□□□ -0.75
EBF1-202ENST00000380654 MT1HL1P0DM35 61 aa10.33□□□□□ -0.76
EBF1-202ENST00000380654 LPAP08519 4548 aa10.3□□□□□ -0.76
EBF1-202ENST00000380654 EPPK1P58107 5090 aaKnown RBP10.29□□□□□ -0.76
EBF1-202ENST00000380654 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
EBF1-202ENST00000380654 LRP2P98164 4655 aa10.22□□□□□ -0.77
EBF1-202ENST00000380654 KRTAP10-6P60371 365 aaPredicted RBP10.15□□□□□ -0.78
EBF1-202ENST00000380654 S4R3F8 94 aa10.15□□□□□ -0.78
EBF1-202ENST00000380654 ABCA13Q86UQ4 5058 aa10.12□□□□□ -0.79
EBF1-202ENST00000380654 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
EBF1-202ENST00000380654 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
EBF1-202ENST00000380654 KRTAP13-4Q3LI77 160 aa10.06□□□□□ -0.8
EBF1-202ENST00000380654 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
EBF1-202ENST00000380654 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
EBF1-202ENST00000380654 P0C880 135 aa9.99□□□□□ -0.81
EBF1-202ENST00000380654 A0A0D9SG42 100 aa9.96□□□□□ -0.81
EBF1-202ENST00000380654 LINC01554Q52M75 96 aa9.95□□□□□ -0.82
EBF1-202ENST00000380654 K7ERS5 55 aa9.94□□□□□ -0.82
EBF1-202ENST00000380654 CRIPTQ9P021 101 aa9.84□□□□□ -0.83
EBF1-202ENST00000380654 KRTAP25-1Q3LHN0 102 aa9.82□□□□□ -0.84
EBF1-202ENST00000380654 MUC17Q685J3 4493 aa9.76□□□□□ -0.85
EBF1-202ENST00000380654 ROMO1P60602 79 aa9.74□□□□□ -0.85
EBF1-202ENST00000380654 KRTAP12-2P59991 146 aa9.71□□□□□ -0.85
EBF1-202ENST00000380654 HERC2O95714 4834 aa9.69□□□□□ -0.86
EBF1-202ENST00000380654 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
EBF1-202ENST00000380654 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
EBF1-202ENST00000380654 SEC61BP60468 96 aaKnown RBP9.62□□□□□ -0.87
EBF1-202ENST00000380654 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
EBF1-202ENST00000380654 J3QL48 77 aa9.6□□□□□ -0.87
EBF1-202ENST00000380654 M0QZ58 72 aa9.56□□□□□ -0.88
EBF1-202ENST00000380654 C10orf95Q9H7T3 257 aa9.5□□□□□ -0.89
EBF1-202ENST00000380654 MUC2Q02817 5179 aa9.48□□□□□ -0.89
EBF1-202ENST00000380654 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
EBF1-202ENST00000380654 R4GN34 69 aa9.42□□□□□ -0.9
EBF1-202ENST00000380654 KRTAP19-2Q3LHN2 52 aa9.41□□□□□ -0.9
EBF1-202ENST00000380654 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
EBF1-202ENST00000380654 HERC1Q15751 4861 aa9.29□□□□□ -0.92
EBF1-202ENST00000380654 FLGP20930 4061 aaPredicted RBP9.24□□□□□ -0.93
EBF1-202ENST00000380654 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.94
EBF1-202ENST00000380654 HMCN2Q8NDA2 5059 aa9.15□□□□□ -0.95
EBF1-202ENST00000380654 FAT4Q6V0I7 4981 aa9.02□□□□□ -0.97
EBF1-202ENST00000380654 KRTAP15-1Q3LI76 137 aa8.94□□□□□ -0.98
EBF1-202ENST00000380654 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
EBF1-202ENST00000380654 H3BS24 57 aa8.89□□□□□ -0.99
EBF1-202ENST00000380654 LCE2CQ5TA81 110 aa8.89□□□□□ -0.99
EBF1-202ENST00000380654 RNF213Q63HN8 5207 aa8.81□□□□□ -1
EBF1-202ENST00000380654 UBR4Q5T4S7 5183 aa8.78□□□□□ -1
EBF1-202ENST00000380654 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
EBF1-202ENST00000380654 M0R2T5 61 aa8.67□□□□□ -1.02
EBF1-202ENST00000380654 MT1HP80294 61 aa8.65□□□□□ -1.03
EBF1-202ENST00000380654 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
EBF1-202ENST00000380654 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
EBF1-202ENST00000380654 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
EBF1-202ENST00000380654 SPRR2GQ9BYE4 73 aa8.6□□□□□ -1.03
EBF1-202ENST00000380654 TNP1P09430 55 aa8.55□□□□□ -1.04
EBF1-202ENST00000380654 MT1FP04733 61 aa8.5□□□□□ -1.05
EBF1-202ENST00000380654 MT2AP02795 61 aa8.48□□□□□ -1.05
EBF1-202ENST00000380654 KRTAP10-10P60014 251 aa8.46□□□□□ -1.05
EBF1-202ENST00000380654 KRTAP9-8Q9BYQ0 159 aa8.45□□□□□ -1.06
EBF1-202ENST00000380654 KRTAP23-1A1A580 65 aa8.34□□□□□ -1.08
EBF1-202ENST00000380654 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
EBF1-202ENST00000380654 LCE3AQ5TA76 89 aa8.19□□□□□ -1.1
EBF1-202ENST00000380654 MT1BP07438 61 aa8.18□□□□□ -1.1
EBF1-202ENST00000380654 LUZP6Q538Z0 58 aa8.13□□□□□ -1.11
EBF1-202ENST00000380654 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
EBF1-202ENST00000380654 MT1XP80297 61 aa8.1□□□□□ -1.11
EBF1-202ENST00000380654 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
EBF1-202ENST00000380654 SPRR5A0A1B0GTR4 108 aa8.03□□□□□ -1.12
EBF1-202ENST00000380654 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
EBF1-202ENST00000380654 KRTAP10-7P60409 375 aaPredicted RBP7.89□□□□□ -1.15
EBF1-202ENST00000380654 KRTAP10-12P60413 245 aa7.87□□□□□ -1.15
EBF1-202ENST00000380654 USH2AO75445 5202 aa7.83□□□□□ -1.16
EBF1-202ENST00000380654 LCE2BO14633 110 aa7.81□□□□□ -1.16
EBF1-202ENST00000380654 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
EBF1-202ENST00000380654 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
EBF1-202ENST00000380654 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
EBF1-202ENST00000380654 KMT2DO14686 5537 aa7.66□□□□□ -1.18
EBF1-202ENST00000380654 A0A0A0MQY5 61 aa7.59□□□□□ -1.19
EBF1-202ENST00000380654 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.21
EBF1-202ENST00000380654 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.21
EBF1-202ENST00000380654 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.21
EBF1-202ENST00000380654 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
EBF1-202ENST00000380654 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
EBF1-202ENST00000380654 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
EBF1-202ENST00000380654 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
EBF1-202ENST00000380654 KRTAP9-6A8MVA2 160 aa7.1□□□□□ -1.27
EBF1-202ENST00000380654 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
EBF1-202ENST00000380654 MT1EP04732 61 aa7□□□□□ -1.29
EBF1-202ENST00000380654 KRTAP19-6Q3LI70 58 aa6.98□□□□□ -1.29
EBF1-202ENST00000380654 MT1LQ93083 61 aa6.98□□□□□ -1.29
EBF1-202ENST00000380654 INE1O15225 51 aa6.88□□□□□ -1.31
EBF1-202ENST00000380654 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
EBF1-202ENST00000380654 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
EBF1-202ENST00000380654 MUC12Q9UKN1 5478 aa6.76□□□□□ -1.33
EBF1-202ENST00000380654 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms