RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
VPS16-202ENST00000380445 HERC2O95714 4834 aa6.73□□□□□ -1.33
VPS16-202ENST00000380445 TNXBP22105 4242 aa6.69□□□□□ -1.34
VPS16-202ENST00000380445 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
VPS16-202ENST00000380445 P0C880 135 aa6.67□□□□□ -1.34
VPS16-202ENST00000380445 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
VPS16-202ENST00000380445 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
VPS16-202ENST00000380445 KRTAP4-5Q9BYR2 181 aa6.65□□□□□ -1.34
VPS16-202ENST00000380445 FAT3Q8TDW7 4589 aa6.65□□□□□ -1.34
VPS16-202ENST00000380445 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.35
VPS16-202ENST00000380445 XP32Q5T750 250 aa6.64□□□□□ -1.35
VPS16-202ENST00000380445 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
VPS16-202ENST00000380445 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
VPS16-202ENST00000380445 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
VPS16-202ENST00000380445 A0A0A0MQY5 61 aa6.59□□□□□ -1.35
VPS16-202ENST00000380445 J3QL48 77 aa6.56□□□□□ -1.36
VPS16-202ENST00000380445 CRIPTQ9P021 101 aa6.56□□□□□ -1.36
VPS16-202ENST00000380445 H0YAA0 97 aa6.53□□□□□ -1.36
VPS16-202ENST00000380445 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
VPS16-202ENST00000380445 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
VPS16-202ENST00000380445 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
VPS16-202ENST00000380445 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
VPS16-202ENST00000380445 A0A1B0GU33 70 aa6.44□□□□□ -1.38
VPS16-202ENST00000380445 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
VPS16-202ENST00000380445 S4R3F8 94 aa6.42□□□□□ -1.38
VPS16-202ENST00000380445 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
VPS16-202ENST00000380445 K7ERS5 55 aa6.4□□□□□ -1.39
VPS16-202ENST00000380445 KRTAP3-3Q9BYR6 98 aa6.39□□□□□ -1.39
VPS16-202ENST00000380445 SEC61BP60468 96 aaKnown RBP6.32□□□□□ -1.4
VPS16-202ENST00000380445 HERC1Q15751 4861 aa6.29□□□□□ -1.4
VPS16-202ENST00000380445 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
VPS16-202ENST00000380445 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
VPS16-202ENST00000380445 LRP2P98164 4655 aa6.26□□□□□ -1.41
VPS16-202ENST00000380445 KRTAP3-2Q9BYR7 98 aa6.24□□□□□ -1.41
VPS16-202ENST00000380445 LPAP08519 4548 aa6.2□□□□□ -1.42
VPS16-202ENST00000380445 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
VPS16-202ENST00000380445 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
VPS16-202ENST00000380445 LUZP6Q538Z0 58 aa6.13□□□□□ -1.43
VPS16-202ENST00000380445 HMCN2Q8NDA2 5059 aa6.13□□□□□ -1.43
VPS16-202ENST00000380445 A0A0D9SG42 100 aa6.11□□□□□ -1.43
VPS16-202ENST00000380445 M0QZ58 72 aa6.08□□□□□ -1.44
VPS16-202ENST00000380445 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
VPS16-202ENST00000380445 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
VPS16-202ENST00000380445 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
VPS16-202ENST00000380445 KRTAP12-2P59991 146 aa5.96□□□□□ -1.46
VPS16-202ENST00000380445 R4GN34 69 aa5.96□□□□□ -1.46
VPS16-202ENST00000380445 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
VPS16-202ENST00000380445 UBR4Q5T4S7 5183 aa5.9□□□□□ -1.46
VPS16-202ENST00000380445 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
VPS16-202ENST00000380445 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
VPS16-202ENST00000380445 MUC2Q02817 5179 aa5.76□□□□□ -1.49
VPS16-202ENST00000380445 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
VPS16-202ENST00000380445 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
VPS16-202ENST00000380445 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
VPS16-202ENST00000380445 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
VPS16-202ENST00000380445 M0R2T5 61 aa5.62□□□□□ -1.51
VPS16-202ENST00000380445 MT1HP80294 61 aa5.58□□□□□ -1.52
VPS16-202ENST00000380445 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
VPS16-202ENST00000380445 SPRR2GQ9BYE4 73 aa5.53□□□□□ -1.52
VPS16-202ENST00000380445 KRTAP10-10P60014 251 aa5.45□□□□□ -1.54
VPS16-202ENST00000380445 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
VPS16-202ENST00000380445 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
VPS16-202ENST00000380445 MT2AP02795 61 aa5.44□□□□□ -1.54
VPS16-202ENST00000380445 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
VPS16-202ENST00000380445 MT1FP04733 61 aa5.42□□□□□ -1.54
VPS16-202ENST00000380445 TNP1P09430 55 aa5.41□□□□□ -1.54
VPS16-202ENST00000380445 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
VPS16-202ENST00000380445 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
VPS16-202ENST00000380445 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
VPS16-202ENST00000380445 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
VPS16-202ENST00000380445 KRTAP9-3Q9BYQ3 159 aa5.21□□□□□ -1.57
VPS16-202ENST00000380445 MT1BP07438 61 aa5.21□□□□□ -1.58
VPS16-202ENST00000380445 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
VPS16-202ENST00000380445 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.58
VPS16-202ENST00000380445 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
VPS16-202ENST00000380445 MT1XP80297 61 aa5.12□□□□□ -1.59
VPS16-202ENST00000380445 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
VPS16-202ENST00000380445 INE1O15225 51 aa5.06□□□□□ -1.6
VPS16-202ENST00000380445 LCE2BO14633 110 aa5□□□□□ -1.61
VPS16-202ENST00000380445 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
VPS16-202ENST00000380445 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
VPS16-202ENST00000380445 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
VPS16-202ENST00000380445 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
VPS16-202ENST00000380445 USH2AO75445 5202 aa4.89□□□□□ -1.63
VPS16-202ENST00000380445 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
VPS16-202ENST00000380445 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
VPS16-202ENST00000380445 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
VPS16-202ENST00000380445 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
VPS16-202ENST00000380445 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
VPS16-202ENST00000380445 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
VPS16-202ENST00000380445 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
VPS16-202ENST00000380445 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
VPS16-202ENST00000380445 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
VPS16-202ENST00000380445 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
VPS16-202ENST00000380445 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
VPS16-202ENST00000380445 KMT2DO14686 5537 aa4.56□□□□□ -1.68
VPS16-202ENST00000380445 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
VPS16-202ENST00000380445 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
VPS16-202ENST00000380445 MT1EP04732 61 aa4.46□□□□□ -1.7
VPS16-202ENST00000380445 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms