RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SPCS1Q9Y6A9 102 aa10□□□□□ -0.81
U2AF1-202ENST00000380276 KRTAP2-3P0C7H8 128 aa9.96□□□□□ -0.82
U2AF1-202ENST00000380276 KRTAP2-4Q9BYR9 128 aa9.96□□□□□ -0.82
U2AF1-202ENST00000380276 A0A087WVE0 104 aa9.95□□□□□ -0.82
U2AF1-202ENST00000380276 SPRR2FQ96RM1 72 aa9.9□□□□□ -0.82
U2AF1-202ENST00000380276 CYP4F30PQ9H0H9 118 aa9.9□□□□□ -0.82
U2AF1-202ENST00000380276 LCE3BQ5TA77 95 aa9.89□□□□□ -0.83
U2AF1-202ENST00000380276 SPRR2EP22531 72 aa9.88□□□□□ -0.83
U2AF1-202ENST00000380276 SPRR2BP35325 72 aa9.88□□□□□ -0.83
U2AF1-202ENST00000380276 SPRR2AP35326 72 aa9.88□□□□□ -0.83
U2AF1-202ENST00000380276 K7EP34 96 aa9.81□□□□□ -0.84
U2AF1-202ENST00000380276 NDUFC1O43677 76 aa9.8□□□□□ -0.84
U2AF1-202ENST00000380276 PRO2289Q9P1D8 64 aa9.8□□□□□ -0.84
U2AF1-202ENST00000380276 LOC101927531A0A1B0GV80 90 aa9.79□□□□□ -0.84
U2AF1-202ENST00000380276 TRAV22A0A0B4J277 110 aa9.78□□□□□ -0.84
U2AF1-202ENST00000380276 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
U2AF1-202ENST00000380276 A8MUN3 132 aa9.77□□□□□ -0.85
U2AF1-202ENST00000380276 H0YAA0 97 aa9.73□□□□□ -0.85
U2AF1-202ENST00000380276 ADM2Q7Z4H4 148 aa9.73□□□□□ -0.85
U2AF1-202ENST00000380276 KRTAP8-1Q8IUC2 63 aa9.72□□□□□ -0.85
U2AF1-202ENST00000380276 MT1XP80297 61 aa9.69□□□□□ -0.86
U2AF1-202ENST00000380276 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
U2AF1-202ENST00000380276 LCE4AQ5TA78 99 aa9.68□□□□□ -0.86
U2AF1-202ENST00000380276 KRTAP9-9Q9BYP9 154 aa9.65□□□□□ -0.86
U2AF1-202ENST00000380276 KRTAP9-4Q9BYQ2 154 aa9.65□□□□□ -0.86
U2AF1-202ENST00000380276 ACYP1P07311 99 aa9.63□□□□□ -0.87
U2AF1-202ENST00000380276 COL5A1-AS1Q5SY13 56 aa9.63□□□□□ -0.87
U2AF1-202ENST00000380276 KRTAP2-2Q9BYT5 123 aa9.62□□□□□ -0.87
U2AF1-202ENST00000380276 KRTAP2-1Q9BYU5 128 aa9.62□□□□□ -0.87
U2AF1-202ENST00000380276 H0Y9P7 68 aa9.6□□□□□ -0.87
U2AF1-202ENST00000380276 LCE1AQ5T7P2 110 aa9.6□□□□□ -0.87
U2AF1-202ENST00000380276 ATOX1O00244 68 aa9.56□□□□□ -0.88
U2AF1-202ENST00000380276 UQCRQO14949 82 aa9.55□□□□□ -0.88
U2AF1-202ENST00000380276 SPRR2DP22532 72 aa9.55□□□□□ -0.88
U2AF1-202ENST00000380276 ETDBQ3ZM63 59 aa9.55□□□□□ -0.88
U2AF1-202ENST00000380276 GTF2H5Q6ZYL4 71 aa9.53□□□□□ -0.88
U2AF1-202ENST00000380276 R4GN34 69 aa9.53□□□□□ -0.88
U2AF1-202ENST00000380276 KRTAP12-2P59991 146 aa9.52□□□□□ -0.89
U2AF1-202ENST00000380276 LOC105371267A0A1B0GV96 52 aa9.51□□□□□ -0.89
U2AF1-202ENST00000380276 HIST1H4AP62805 103 aaKnown RBP9.5□□□□□ -0.89
U2AF1-202ENST00000380276 F8W1H4 67 aa9.49□□□□□ -0.89
U2AF1-202ENST00000380276 KRTAP23-1A1A580 65 aa9.47□□□□□ -0.89
U2AF1-202ENST00000380276 KRTAP4-8A0A0G2JLE6 195 aa9.46□□□□□ -0.9
U2AF1-202ENST00000380276 M0QZ58 72 aa9.45□□□□□ -0.9
U2AF1-202ENST00000380276 P0C880 135 aa9.42□□□□□ -0.9
U2AF1-202ENST00000380276 C20orf197Q8N268 126 aa9.41□□□□□ -0.9
U2AF1-202ENST00000380276 LINC00208Q96KT6 92 aa9.4□□□□□ -0.9
U2AF1-202ENST00000380276 LINC01554Q52M75 96 aa9.39□□□□□ -0.91
U2AF1-202ENST00000380276 ATP5EP2Q5VTU8 51 aa9.38□□□□□ -0.91
U2AF1-202ENST00000380276 MP68P56378 58 aa9.28□□□□□ -0.92
U2AF1-202ENST00000380276 KRTAP10-7P60409 375 aaPredicted RBP9.27□□□□□ -0.93
U2AF1-202ENST00000380276 LCE1DQ5T752 114 aa9.26□□□□□ -0.93
U2AF1-202ENST00000380276 FAM240AA0A1B0GVK7 77 aa9.22□□□□□ -0.93
U2AF1-202ENST00000380276 KRTAP10-12P60413 245 aa9.18□□□□□ -0.94
U2AF1-202ENST00000380276 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
U2AF1-202ENST00000380276 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
U2AF1-202ENST00000380276 LINC00643Q86TS7 51 aa9.11□□□□□ -0.95
U2AF1-202ENST00000380276 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
U2AF1-202ENST00000380276 PCP4L1A6NKN8 68 aa9.1□□□□□ -0.95
U2AF1-202ENST00000380276 H3BPC8 53 aa9.01□□□□□ -0.97
U2AF1-202ENST00000380276 KRTAP4-7Q9BYR0 210 aa8.98□□□□□ -0.97
U2AF1-202ENST00000380276 LCE5AQ5TCM9 118 aa8.97□□□□□ -0.97
U2AF1-202ENST00000380276 SVIPQ8NHG7 77 aa8.94□□□□□ -0.98
U2AF1-202ENST00000380276 GPR98Q8WXG9 6306 aa8.92□□□□□ -0.98
U2AF1-202ENST00000380276 TRAV7A0A075B6U4 112 aa8.91□□□□□ -0.98
U2AF1-202ENST00000380276 KRTAP4-9Q9BYQ8 210 aa8.91□□□□□ -0.98
U2AF1-202ENST00000380276 SCGB1A1P11684 91 aa8.88□□□□□ -0.99
U2AF1-202ENST00000380276 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
U2AF1-202ENST00000380276 DSTQ03001 7570 aaKnown RBP8.85□□□□□ -0.99
U2AF1-202ENST00000380276 ACYP2P14621 99 aa8.85□□□□□ -0.99
U2AF1-202ENST00000380276 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
U2AF1-202ENST00000380276 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
U2AF1-202ENST00000380276 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
U2AF1-202ENST00000380276 KRTAP4-11Q9BYQ6 195 aa8.69□□□□□ -1.02
U2AF1-202ENST00000380276 KRTAP19-7Q3SYF9 63 aa8.65□□□□□ -1.02
U2AF1-202ENST00000380276 KRTAP19-3Q7Z4W3 81 aa8.65□□□□□ -1.02
U2AF1-202ENST00000380276 MT1EP04732 61 aa8.62□□□□□ -1.03
U2AF1-202ENST00000380276 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
U2AF1-202ENST00000380276 KRTAP4-2Q9BYR5 136 aa8.59□□□□□ -1.03
U2AF1-202ENST00000380276 J3QR89 54 aa8.56□□□□□ -1.04
U2AF1-202ENST00000380276 CYSTM1Q9H1C7 97 aa8.53□□□□□ -1.04
U2AF1-202ENST00000380276 A0A1B0GV90 55 aa8.5□□□□□ -1.05
U2AF1-202ENST00000380276 SMIM20Q8N5G0 67 aa8.43□□□□□ -1.06
U2AF1-202ENST00000380276 A0A0D9SG42 100 aa8.41□□□□□ -1.06
U2AF1-202ENST00000380276 MT4P47944 62 aa8.41□□□□□ -1.06
U2AF1-202ENST00000380276 SNURFQ9Y675 71 aa8.4□□□□□ -1.06
U2AF1-202ENST00000380276 MT1GP13640 62 aa8.38□□□□□ -1.07
U2AF1-202ENST00000380276 KRTAP19-5Q3LI72 72 aa8.38□□□□□ -1.07
U2AF1-202ENST00000380276 PP632Q6XCG6 107 aa8.37□□□□□ -1.07
U2AF1-202ENST00000380276 HMCN1Q96RW7 5635 aa8.32□□□□□ -1.08
U2AF1-202ENST00000380276 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
U2AF1-202ENST00000380276 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.09
U2AF1-202ENST00000380276 MT1MQ8N339 61 aa8.25□□□□□ -1.09
U2AF1-202ENST00000380276 SEC61GP60059 68 aa8.23□□□□□ -1.09
U2AF1-202ENST00000380276 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
U2AF1-202ENST00000380276 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
U2AF1-202ENST00000380276 AHNAK2Q8IVF2 5795 aa8.21□□□□□ -1.1
U2AF1-202ENST00000380276 PCP4P48539 62 aa8.16□□□□□ -1.1
U2AF1-202ENST00000380276 MT1LQ93083 61 aa8.16□□□□□ -1.1
U2AF1-202ENST00000380276 COA5Q86WW8 74 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms