RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
GPCPD1-201ENST00000379019 H0YAA0 97 aa4.03□□□□□ -1.76
GPCPD1-201ENST00000379019 KRTAP1-4P0C5Y4 121 aa4.03□□□□□ -1.76
GPCPD1-201ENST00000379019 SSBP3-AS1Q7Z2R9 100 aa4.03□□□□□ -1.76
GPCPD1-201ENST00000379019 FAT4Q6V0I7 4981 aa4.02□□□□□ -1.77
GPCPD1-201ENST00000379019 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
GPCPD1-201ENST00000379019 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
GPCPD1-201ENST00000379019 LINC01554Q52M75 96 aa4□□□□□ -1.77
GPCPD1-201ENST00000379019 DMAC1Q96GE9 116 aa4□□□□□ -1.77
GPCPD1-201ENST00000379019 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
GPCPD1-201ENST00000379019 SPINK1P00995 79 aa3.99□□□□□ -1.77
GPCPD1-201ENST00000379019 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
GPCPD1-201ENST00000379019 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
GPCPD1-201ENST00000379019 H3BPC8 53 aa3.97□□□□□ -1.77
GPCPD1-201ENST00000379019 IGKV2D-30A0A075B6S6 120 aa3.97□□□□□ -1.77
GPCPD1-201ENST00000379019 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
GPCPD1-201ENST00000379019 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.78
GPCPD1-201ENST00000379019 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
GPCPD1-201ENST00000379019 P0C880 135 aa3.94□□□□□ -1.78
GPCPD1-201ENST00000379019 TPRXLQ17RH7 258 aa3.93□□□□□ -1.78
GPCPD1-201ENST00000379019 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
GPCPD1-201ENST00000379019 A0A1B0GU69 56 aa3.88□□□□□ -1.79
GPCPD1-201ENST00000379019 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
GPCPD1-201ENST00000379019 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
GPCPD1-201ENST00000379019 A8MUU9 505 aa3.88□□□□□ -1.79
GPCPD1-201ENST00000379019 MIR22HGQ0VDD5 57 aa3.88□□□□□ -1.79
GPCPD1-201ENST00000379019 KRTAP3-3Q9BYR6 98 aa3.87□□□□□ -1.79
GPCPD1-201ENST00000379019 C9orf92A6NGG3 77 aa3.87□□□□□ -1.79
GPCPD1-201ENST00000379019 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
GPCPD1-201ENST00000379019 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
GPCPD1-201ENST00000379019 ACYP2P14621 99 aa3.85□□□□□ -1.79
GPCPD1-201ENST00000379019 HERC1Q15751 4861 aa3.84□□□□□ -1.79
GPCPD1-201ENST00000379019 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
GPCPD1-201ENST00000379019 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
GPCPD1-201ENST00000379019 HMCN2Q8NDA2 5059 aa3.82□□□□□ -1.8
GPCPD1-201ENST00000379019 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
GPCPD1-201ENST00000379019 XP32Q5T750 250 aa3.8□□□□□ -1.8
GPCPD1-201ENST00000379019 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
GPCPD1-201ENST00000379019 UQCR11O14957 56 aa3.78□□□□□ -1.8
GPCPD1-201ENST00000379019 COX6B2Q6YFQ2 88 aa3.76□□□□□ -1.81
GPCPD1-201ENST00000379019 ROMO1P60602 79 aa3.74□□□□□ -1.81
GPCPD1-201ENST00000379019 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
GPCPD1-201ENST00000379019 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
GPCPD1-201ENST00000379019 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
GPCPD1-201ENST00000379019 RPL37P61927 97 aaKnown RBP3.7□□□□□ -1.82
GPCPD1-201ENST00000379019 A0A0D9SG42 100 aa3.69□□□□□ -1.82
GPCPD1-201ENST00000379019 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
GPCPD1-201ENST00000379019 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
GPCPD1-201ENST00000379019 A0A1B0GU33 70 aa3.67□□□□□ -1.82
GPCPD1-201ENST00000379019 C20orf166-AS1Q96NR2 134 aa3.66□□□□□ -1.82
GPCPD1-201ENST00000379019 USH2AO75445 5202 aa3.63□□□□□ -1.83
GPCPD1-201ENST00000379019 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
GPCPD1-201ENST00000379019 KMT2DO14686 5537 aa3.61□□□□□ -1.83
GPCPD1-201ENST00000379019 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
GPCPD1-201ENST00000379019 LCE2AQ5TA79 106 aaPredicted RBP3.57□□□□□ -1.84
GPCPD1-201ENST00000379019 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
GPCPD1-201ENST00000379019 LCE2DQ5TA82 110 aaPredicted RBP3.51□□□□□ -1.85
GPCPD1-201ENST00000379019 S4R3F8 94 aa3.51□□□□□ -1.85
GPCPD1-201ENST00000379019 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
GPCPD1-201ENST00000379019 LCE2CQ5TA81 110 aa3.46□□□□□ -1.86
GPCPD1-201ENST00000379019 MT1HP80294 61 aa3.45□□□□□ -1.86
GPCPD1-201ENST00000379019 M0R2T5 61 aa3.4□□□□□ -1.87
GPCPD1-201ENST00000379019 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
GPCPD1-201ENST00000379019 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
GPCPD1-201ENST00000379019 R4GN34 69 aa3.31□□□□□ -1.88
GPCPD1-201ENST00000379019 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
GPCPD1-201ENST00000379019 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
GPCPD1-201ENST00000379019 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
GPCPD1-201ENST00000379019 PLAC4Q8WY50 150 aa3.25□□□□□ -1.89
GPCPD1-201ENST00000379019 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
GPCPD1-201ENST00000379019 M0QZ58 72 aa3.24□□□□□ -1.89
GPCPD1-201ENST00000379019 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
GPCPD1-201ENST00000379019 MT2AP02795 61 aa3.23□□□□□ -1.89
GPCPD1-201ENST00000379019 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
GPCPD1-201ENST00000379019 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
GPCPD1-201ENST00000379019 KRTAP9-3Q9BYQ3 159 aa3.18□□□□□ -1.9
GPCPD1-201ENST00000379019 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
GPCPD1-201ENST00000379019 MT1FP04733 61 aa3.16□□□□□ -1.9
GPCPD1-201ENST00000379019 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
GPCPD1-201ENST00000379019 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
GPCPD1-201ENST00000379019 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
GPCPD1-201ENST00000379019 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
GPCPD1-201ENST00000379019 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
GPCPD1-201ENST00000379019 LCE2BO14633 110 aa3.06□□□□□ -1.92
GPCPD1-201ENST00000379019 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
GPCPD1-201ENST00000379019 PRO2289Q9P1D8 64 aa3.06□□□□□ -1.92
GPCPD1-201ENST00000379019 INE1O15225 51 aa3.04□□□□□ -1.92
GPCPD1-201ENST00000379019 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.93
GPCPD1-201ENST00000379019 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
GPCPD1-201ENST00000379019 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
GPCPD1-201ENST00000379019 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
GPCPD1-201ENST00000379019 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
GPCPD1-201ENST00000379019 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
GPCPD1-201ENST00000379019 MT3P25713 68 aa2.96□□□□□ -1.94
GPCPD1-201ENST00000379019 MT1BP07438 61 aa2.95□□□□□ -1.94
GPCPD1-201ENST00000379019 KRTAP9-7A8MTY7 169 aa2.95□□□□□ -1.94
GPCPD1-201ENST00000379019 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
GPCPD1-201ENST00000379019 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
GPCPD1-201ENST00000379019 MT1XP80297 61 aa2.91□□□□□ -1.94
GPCPD1-201ENST00000379019 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms