RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 KRTAP1-4P0C5Y4 121 aa3.53□□□□□ -1.85
CDKAL1-202ENST00000378610 COX6B2Q6YFQ2 88 aa3.52□□□□□ -1.85
CDKAL1-202ENST00000378610 SPINK1P00995 79 aa3.51□□□□□ -1.85
CDKAL1-202ENST00000378610 PCLOQ9Y6V0 5065 aa3.51□□□□□ -1.85
CDKAL1-202ENST00000378610 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
CDKAL1-202ENST00000378610 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
CDKAL1-202ENST00000378610 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
CDKAL1-202ENST00000378610 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
CDKAL1-202ENST00000378610 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
CDKAL1-202ENST00000378610 TGP01266 2768 aa3.48□□□□□ -1.85
CDKAL1-202ENST00000378610 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
CDKAL1-202ENST00000378610 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
CDKAL1-202ENST00000378610 FAT2Q9NYQ8 4349 aa3.47□□□□□ -1.85
CDKAL1-202ENST00000378610 PKHD1P08F94 4074 aa3.47□□□□□ -1.85
CDKAL1-202ENST00000378610 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
CDKAL1-202ENST00000378610 DNHD1Q96M86 4753 aa3.46□□□□□ -1.86
CDKAL1-202ENST00000378610 CRIPTQ9P021 101 aa3.46□□□□□ -1.86
CDKAL1-202ENST00000378610 RYR3Q15413 4870 aa3.45□□□□□ -1.86
CDKAL1-202ENST00000378610 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
CDKAL1-202ENST00000378610 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
CDKAL1-202ENST00000378610 NOTCH1P46531 2555 aa3.43□□□□□ -1.86
CDKAL1-202ENST00000378610 TNXBP22105 4242 aa3.41□□□□□ -1.86
CDKAL1-202ENST00000378610 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
CDKAL1-202ENST00000378610 MYCBP2O75592 4640 aa3.4□□□□□ -1.87
CDKAL1-202ENST00000378610 STAB2Q8WWQ8 2551 aa3.39□□□□□ -1.87
CDKAL1-202ENST00000378610 COL6A5A8TX70 2615 aa3.37□□□□□ -1.87
CDKAL1-202ENST00000378610 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
CDKAL1-202ENST00000378610 HSPG2P98160 4391 aa3.37□□□□□ -1.87
CDKAL1-202ENST00000378610 S4R3F8 94 aa3.35□□□□□ -1.87
CDKAL1-202ENST00000378610 STAB1Q9NY15 2570 aa3.35□□□□□ -1.87
CDKAL1-202ENST00000378610 LRP1Q07954 4544 aaKnown RBP3.35□□□□□ -1.87
CDKAL1-202ENST00000378610 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
CDKAL1-202ENST00000378610 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
CDKAL1-202ENST00000378610 FLG2Q5D862 2391 aaPredicted RBP3.32□□□□□ -1.88
CDKAL1-202ENST00000378610 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
CDKAL1-202ENST00000378610 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
CDKAL1-202ENST00000378610 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
CDKAL1-202ENST00000378610 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
CDKAL1-202ENST00000378610 HYDINQ4G0P3 5121 aa3.3□□□□□ -1.88
CDKAL1-202ENST00000378610 C9orf92A6NGG3 77 aa3.26□□□□□ -1.89
CDKAL1-202ENST00000378610 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
CDKAL1-202ENST00000378610 MGAM2Q2M2H8 2515 aa3.26□□□□□ -1.89
CDKAL1-202ENST00000378610 A0A0D9SG42 100 aa3.26□□□□□ -1.89
CDKAL1-202ENST00000378610 KRTAP10-4P60372 401 aaPredicted RBP3.26□□□□□ -1.89
CDKAL1-202ENST00000378610 KRTAP4-8Q9BYQ9 185 aa3.24□□□□□ -1.89
CDKAL1-202ENST00000378610 FAT1Q14517 4588 aa3.24□□□□□ -1.89
CDKAL1-202ENST00000378610 DYNC1H1Q14204 4646 aaKnown RBP3.23□□□□□ -1.89
CDKAL1-202ENST00000378610 HERC2O95714 4834 aa3.23□□□□□ -1.89
CDKAL1-202ENST00000378610 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
CDKAL1-202ENST00000378610 KRTAP10-8P60410 259 aa3.21□□□□□ -1.9
CDKAL1-202ENST00000378610 KIAA1109Q2LD37 5005 aa3.21□□□□□ -1.9
CDKAL1-202ENST00000378610 A0A1B0GVY2 172 aa3.21□□□□□ -1.9
CDKAL1-202ENST00000378610 M0QZ58 72 aa3.21□□□□□ -1.9
CDKAL1-202ENST00000378610 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
CDKAL1-202ENST00000378610 RYR2Q92736 4967 aa3.17□□□□□ -1.9
CDKAL1-202ENST00000378610 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
CDKAL1-202ENST00000378610 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
CDKAL1-202ENST00000378610 KRTAP4-8A0A0G2JLE6 195 aa3.1□□□□□ -1.91
CDKAL1-202ENST00000378610 LPAP08519 4548 aa3.09□□□□□ -1.91
CDKAL1-202ENST00000378610 KRTAP9-8Q9BYQ0 159 aa3.09□□□□□ -1.92
CDKAL1-202ENST00000378610 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
CDKAL1-202ENST00000378610 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CDKAL1-202ENST00000378610 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
CDKAL1-202ENST00000378610 INE1O15225 51 aa3.07□□□□□ -1.92
CDKAL1-202ENST00000378610 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
CDKAL1-202ENST00000378610 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
CDKAL1-202ENST00000378610 KRTAP4-7Q9BYR0 210 aa3.05□□□□□ -1.92
CDKAL1-202ENST00000378610 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
CDKAL1-202ENST00000378610 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
CDKAL1-202ENST00000378610 SMR3BP02814 79 aaPredicted RBP3.02□□□□□ -1.93
CDKAL1-202ENST00000378610 CRCT1Q9UGL9 99 aa3.02□□□□□ -1.93
CDKAL1-202ENST00000378610 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
CDKAL1-202ENST00000378610 MT3P25713 68 aa3.01□□□□□ -1.93
CDKAL1-202ENST00000378610 RYR1P21817 5038 aa3□□□□□ -1.93
CDKAL1-202ENST00000378610 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
CDKAL1-202ENST00000378610 DMBT1Q9UGM3 2413 aaPredicted RBP2.96□□□□□ -1.94
CDKAL1-202ENST00000378610 MT1HL1P0DM35 61 aa2.96□□□□□ -1.94
CDKAL1-202ENST00000378610 HERC1Q15751 4861 aa2.96□□□□□ -1.94
CDKAL1-202ENST00000378610 SSPOA2VEC9 5147 aa2.95□□□□□ -1.94
CDKAL1-202ENST00000378610 Q5VSD8 79 aa2.94□□□□□ -1.94
CDKAL1-202ENST00000378610 LRP2P98164 4655 aa2.92□□□□□ -1.94
CDKAL1-202ENST00000378610 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
CDKAL1-202ENST00000378610 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
CDKAL1-202ENST00000378610 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
CDKAL1-202ENST00000378610 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
CDKAL1-202ENST00000378610 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.95
CDKAL1-202ENST00000378610 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
CDKAL1-202ENST00000378610 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
CDKAL1-202ENST00000378610 TNP1P09430 55 aa2.8□□□□□ -1.96
CDKAL1-202ENST00000378610 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
CDKAL1-202ENST00000378610 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
CDKAL1-202ENST00000378610 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
CDKAL1-202ENST00000378610 KRTAP4-1Q9BYQ7 146 aa2.76□□□□□ -1.97
CDKAL1-202ENST00000378610 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
CDKAL1-202ENST00000378610 MUC2Q02817 5179 aa2.74□□□□□ -1.97
CDKAL1-202ENST00000378610 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
CDKAL1-202ENST00000378610 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
CDKAL1-202ENST00000378610 KRTAP4-5Q9BYR2 181 aa2.7□□□□□ -1.98
CDKAL1-202ENST00000378610 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
CDKAL1-202ENST00000378610 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms