RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
CEACAM1-205ENST00000377806 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
CEACAM1-205ENST00000377806 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
CEACAM1-205ENST00000377806 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
CEACAM1-205ENST00000377806 SPINK1P00995 79 aa6.95□□□□□ -1.3
CEACAM1-205ENST00000377806 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
CEACAM1-205ENST00000377806 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
CEACAM1-205ENST00000377806 RPS29P62273 56 aaKnown RBP6.92□□□□□ -1.3
CEACAM1-205ENST00000377806 Q8N1X5 172 aa6.91□□□□□ -1.3
CEACAM1-205ENST00000377806 Q5VSD8 79 aa6.89□□□□□ -1.31
CEACAM1-205ENST00000377806 MYCBP2O75592 4640 aa6.87□□□□□ -1.31
CEACAM1-205ENST00000377806 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
CEACAM1-205ENST00000377806 A0A1B0GU33 70 aa6.85□□□□□ -1.31
CEACAM1-205ENST00000377806 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
CEACAM1-205ENST00000377806 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
CEACAM1-205ENST00000377806 FAT3Q8TDW7 4589 aa6.75□□□□□ -1.33
CEACAM1-205ENST00000377806 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
CEACAM1-205ENST00000377806 H0YAA0 97 aa6.73□□□□□ -1.33
CEACAM1-205ENST00000377806 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
CEACAM1-205ENST00000377806 TNXBP22105 4242 aa6.72□□□□□ -1.33
CEACAM1-205ENST00000377806 HERC1Q15751 4861 aa6.71□□□□□ -1.33
CEACAM1-205ENST00000377806 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.34
CEACAM1-205ENST00000377806 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
CEACAM1-205ENST00000377806 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
CEACAM1-205ENST00000377806 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
CEACAM1-205ENST00000377806 IGKV2D-30A0A075B6S6 120 aa6.62□□□□□ -1.35
CEACAM1-205ENST00000377806 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
CEACAM1-205ENST00000377806 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
CEACAM1-205ENST00000377806 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
CEACAM1-205ENST00000377806 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
CEACAM1-205ENST00000377806 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
CEACAM1-205ENST00000377806 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
CEACAM1-205ENST00000377806 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.37
CEACAM1-205ENST00000377806 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.38
CEACAM1-205ENST00000377806 XP32Q5T750 250 aa6.45□□□□□ -1.38
CEACAM1-205ENST00000377806 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
CEACAM1-205ENST00000377806 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
CEACAM1-205ENST00000377806 LRP2P98164 4655 aa6.35□□□□□ -1.39
CEACAM1-205ENST00000377806 LPAP08519 4548 aa6.35□□□□□ -1.39
CEACAM1-205ENST00000377806 UBR4Q5T4S7 5183 aa6.34□□□□□ -1.4
CEACAM1-205ENST00000377806 R4GN34 69 aa6.3□□□□□ -1.4
CEACAM1-205ENST00000377806 INE1O15225 51 aa6.29□□□□□ -1.4
CEACAM1-205ENST00000377806 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
CEACAM1-205ENST00000377806 KRTAP3-3Q9BYR6 98 aa6.19□□□□□ -1.42
CEACAM1-205ENST00000377806 RNF213Q63HN8 5207 aa6.18□□□□□ -1.42
CEACAM1-205ENST00000377806 S4R3F8 94 aa6.11□□□□□ -1.43
CEACAM1-205ENST00000377806 MUC2Q02817 5179 aa6.07□□□□□ -1.44
CEACAM1-205ENST00000377806 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
CEACAM1-205ENST00000377806 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
CEACAM1-205ENST00000377806 KRTAP12-2P59991 146 aa6.04□□□□□ -1.44
CEACAM1-205ENST00000377806 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
CEACAM1-205ENST00000377806 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
CEACAM1-205ENST00000377806 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
CEACAM1-205ENST00000377806 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
CEACAM1-205ENST00000377806 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
CEACAM1-205ENST00000377806 FAT4Q6V0I7 4981 aa5.87□□□□□ -1.47
CEACAM1-205ENST00000377806 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
CEACAM1-205ENST00000377806 A0A0D9SG42 100 aa5.8□□□□□ -1.48
CEACAM1-205ENST00000377806 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
CEACAM1-205ENST00000377806 M0QZ58 72 aa5.75□□□□□ -1.49
CEACAM1-205ENST00000377806 FLGP20930 4061 aaPredicted RBP5.7□□□□□ -1.5
CEACAM1-205ENST00000377806 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
CEACAM1-205ENST00000377806 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
CEACAM1-205ENST00000377806 LCE2AQ5TA79 106 aaPredicted RBP5.67□□□□□ -1.5
CEACAM1-205ENST00000377806 MT1HP80294 61 aa5.57□□□□□ -1.52
CEACAM1-205ENST00000377806 M0R2T5 61 aa5.44□□□□□ -1.54
CEACAM1-205ENST00000377806 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
CEACAM1-205ENST00000377806 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
CEACAM1-205ENST00000377806 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
CEACAM1-205ENST00000377806 MT2AP02795 61 aa5.37□□□□□ -1.55
CEACAM1-205ENST00000377806 KRTAP19-1Q8IUB9 90 aa5.36□□□□□ -1.55
CEACAM1-205ENST00000377806 MT1FP04733 61 aa5.35□□□□□ -1.55
CEACAM1-205ENST00000377806 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
CEACAM1-205ENST00000377806 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
CEACAM1-205ENST00000377806 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
CEACAM1-205ENST00000377806 LCE2BO14633 110 aa5.17□□□□□ -1.58
CEACAM1-205ENST00000377806 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
CEACAM1-205ENST00000377806 USH2AO75445 5202 aa5.15□□□□□ -1.58
CEACAM1-205ENST00000377806 MT1BP07438 61 aa5.14□□□□□ -1.59
CEACAM1-205ENST00000377806 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
CEACAM1-205ENST00000377806 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
CEACAM1-205ENST00000377806 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
CEACAM1-205ENST00000377806 TNP1P09430 55 aa5.09□□□□□ -1.6
CEACAM1-205ENST00000377806 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
CEACAM1-205ENST00000377806 MT1XP80297 61 aa5.02□□□□□ -1.61
CEACAM1-205ENST00000377806 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
CEACAM1-205ENST00000377806 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
CEACAM1-205ENST00000377806 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
CEACAM1-205ENST00000377806 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
CEACAM1-205ENST00000377806 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
CEACAM1-205ENST00000377806 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
CEACAM1-205ENST00000377806 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
CEACAM1-205ENST00000377806 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
CEACAM1-205ENST00000377806 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-205ENST00000377806 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
CEACAM1-205ENST00000377806 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
CEACAM1-205ENST00000377806 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
CEACAM1-205ENST00000377806 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
CEACAM1-205ENST00000377806 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
CEACAM1-205ENST00000377806 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms