RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 XP32Q5T750 250 aa12.5□□□□□ -0.41
SNX5-201ENST00000377759 MT1HL1P0DM35 61 aa12.48□□□□□ -0.41
SNX5-201ENST00000377759 H0YAA0 97 aa12.4□□□□□ -0.42
SNX5-201ENST00000377759 A0A1B0GU33 70 aa12.35□□□□□ -0.43
SNX5-201ENST00000377759 H1FX-AS1Q4G0G2 97 aa12.32□□□□□ -0.44
SNX5-201ENST00000377759 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
SNX5-201ENST00000377759 PRAC1Q96KF2 57 aa12.3□□□□□ -0.44
SNX5-201ENST00000377759 ADM2Q7Z4H4 148 aa12.29□□□□□ -0.44
SNX5-201ENST00000377759 EPPK1P58107 5090 aaKnown RBP12.27□□□□□ -0.45
SNX5-201ENST00000377759 KRTAP10-6P60371 365 aaPredicted RBP12.13□□□□□ -0.47
SNX5-201ENST00000377759 S4R3F8 94 aa12.13□□□□□ -0.47
SNX5-201ENST00000377759 LPAP08519 4548 aa12.11□□□□□ -0.47
SNX5-201ENST00000377759 LRP2P98164 4655 aa12.11□□□□□ -0.47
SNX5-201ENST00000377759 TPRXLQ17RH7 258 aa12.09□□□□□ -0.47
SNX5-201ENST00000377759 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
SNX5-201ENST00000377759 KRTAP4-5Q9BYR2 181 aa12.05□□□□□ -0.48
SNX5-201ENST00000377759 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
SNX5-201ENST00000377759 KRTAP13-4Q3LI77 160 aa11.97□□□□□ -0.49
SNX5-201ENST00000377759 LINC01554Q52M75 96 aa11.95□□□□□ -0.5
SNX5-201ENST00000377759 CSAG1Q6PB30 78 aa11.91□□□□□ -0.5
SNX5-201ENST00000377759 P0C880 135 aa11.9□□□□□ -0.5
SNX5-201ENST00000377759 K7ERS5 55 aa11.81□□□□□ -0.52
SNX5-201ENST00000377759 A0A0D9SG42 100 aa11.77□□□□□ -0.53
SNX5-201ENST00000377759 KRTAP25-1Q3LHN0 102 aa11.63□□□□□ -0.55
SNX5-201ENST00000377759 MUC17Q685J3 4493 aa11.62□□□□□ -0.55
SNX5-201ENST00000377759 HERC2O95714 4834 aa11.61□□□□□ -0.55
SNX5-201ENST00000377759 SEC61BP60468 96 aaKnown RBP11.6□□□□□ -0.55
SNX5-201ENST00000377759 ROMO1P60602 79 aa11.59□□□□□ -0.55
SNX5-201ENST00000377759 KRTAP4-1Q9BYQ7 146 aa11.57□□□□□ -0.56
SNX5-201ENST00000377759 J3QL48 77 aa11.55□□□□□ -0.56
SNX5-201ENST00000377759 KRTAP12-2P59991 146 aa11.54□□□□□ -0.56
SNX5-201ENST00000377759 CRIPTQ9P021 101 aa11.53□□□□□ -0.56
SNX5-201ENST00000377759 M0QZ58 72 aa11.48□□□□□ -0.57
SNX5-201ENST00000377759 KRTAP12-1P59990 96 aa11.48□□□□□ -0.57
SNX5-201ENST00000377759 SPINT4Q6UDR6 99 aa11.38□□□□□ -0.59
SNX5-201ENST00000377759 KRTAP19-2Q3LHN2 52 aa11.38□□□□□ -0.59
SNX5-201ENST00000377759 BIRC6Q9NR09 4857 aa11.36□□□□□ -0.59
SNX5-201ENST00000377759 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
SNX5-201ENST00000377759 R4GN34 69 aa11.22□□□□□ -0.61
SNX5-201ENST00000377759 C10orf95Q9H7T3 257 aa11.19□□□□□ -0.62
SNX5-201ENST00000377759 H3BS24 57 aa11.17□□□□□ -0.62
SNX5-201ENST00000377759 MUC2Q02817 5179 aa11.13□□□□□ -0.63
SNX5-201ENST00000377759 FLGP20930 4061 aaPredicted RBP11.06□□□□□ -0.64
SNX5-201ENST00000377759 HERC1Q15751 4861 aa11.02□□□□□ -0.65
SNX5-201ENST00000377759 HMCN2Q8NDA2 5059 aa10.98□□□□□ -0.65
SNX5-201ENST00000377759 PCLOQ9Y6V0 5065 aa10.97□□□□□ -0.65
SNX5-201ENST00000377759 LCE2CQ5TA81 110 aa10.75□□□□□ -0.69
SNX5-201ENST00000377759 FAT4Q6V0I7 4981 aa10.64□□□□□ -0.71
SNX5-201ENST00000377759 CAMK2N1Q7Z7J9 78 aa10.6□□□□□ -0.71
SNX5-201ENST00000377759 KRTAP15-1Q3LI76 137 aa10.6□□□□□ -0.71
SNX5-201ENST00000377759 RNF213Q63HN8 5207 aa10.48□□□□□ -0.73
SNX5-201ENST00000377759 UBR4Q5T4S7 5183 aa10.45□□□□□ -0.74
SNX5-201ENST00000377759 MT1HP80294 61 aa10.43□□□□□ -0.74
SNX5-201ENST00000377759 NDUFAF8A1L188 74 aa10.41□□□□□ -0.74
SNX5-201ENST00000377759 SPRR2GQ9BYE4 73 aa10.38□□□□□ -0.75
SNX5-201ENST00000377759 KRTAP19-1Q8IUB9 90 aa10.37□□□□□ -0.75
SNX5-201ENST00000377759 M0R2T5 61 aa10.35□□□□□ -0.75
SNX5-201ENST00000377759 PP632Q6XCG6 107 aa10.32□□□□□ -0.76
SNX5-201ENST00000377759 MT2AP02795 61 aa10.23□□□□□ -0.77
SNX5-201ENST00000377759 MT1FP04733 61 aa10.22□□□□□ -0.77
SNX5-201ENST00000377759 TNP1P09430 55 aa10.21□□□□□ -0.77
SNX5-201ENST00000377759 PLAC4Q8WY50 150 aa10.21□□□□□ -0.77
SNX5-201ENST00000377759 KRTAP9-8Q9BYQ0 159 aa10.19□□□□□ -0.78
SNX5-201ENST00000377759 KRTAP10-10P60014 251 aa10.14□□□□□ -0.79
SNX5-201ENST00000377759 KRTAP23-1A1A580 65 aa10.08□□□□□ -0.8
SNX5-201ENST00000377759 KRTAP19-8Q3LI54 63 aa9.97□□□□□ -0.81
SNX5-201ENST00000377759 MT1BP07438 61 aa9.86□□□□□ -0.83
SNX5-201ENST00000377759 KRTAP9-3Q9BYQ3 159 aa9.78□□□□□ -0.84
SNX5-201ENST00000377759 LCE3AQ5TA76 89 aa9.75□□□□□ -0.85
SNX5-201ENST00000377759 KRTAP10-5P60370 271 aa9.74□□□□□ -0.85
SNX5-201ENST00000377759 MT1XP80297 61 aa9.73□□□□□ -0.85
SNX5-201ENST00000377759 SPRR5A0A1B0GTR4 108 aa9.63□□□□□ -0.87
SNX5-201ENST00000377759 LUZP6Q538Z0 58 aa9.61□□□□□ -0.87
SNX5-201ENST00000377759 KRTAP8-1Q8IUC2 63 aa9.53□□□□□ -0.88
SNX5-201ENST00000377759 KRTAP10-7P60409 375 aaPredicted RBP9.43□□□□□ -0.9
SNX5-201ENST00000377759 KRTAP10-12P60413 245 aa9.42□□□□□ -0.9
SNX5-201ENST00000377759 LCE2BO14633 110 aa9.42□□□□□ -0.9
SNX5-201ENST00000377759 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
SNX5-201ENST00000377759 PRO2289Q9P1D8 64 aa9.31□□□□□ -0.92
SNX5-201ENST00000377759 KRTAP12-3P60328 96 aa9.29□□□□□ -0.92
SNX5-201ENST00000377759 A0A0A0MQY5 61 aa9.21□□□□□ -0.93
SNX5-201ENST00000377759 USH2AO75445 5202 aa9.18□□□□□ -0.94
SNX5-201ENST00000377759 KRTAP19-5Q3LI72 72 aa8.99□□□□□ -0.97
SNX5-201ENST00000377759 KMT2DO14686 5537 aa8.93□□□□□ -0.98
SNX5-201ENST00000377759 KRTAP4-8A0A0G2JLE6 195 aa8.9□□□□□ -0.98
SNX5-201ENST00000377759 KRTAP4-8Q9BYQ9 185 aa8.9□□□□□ -0.98
SNX5-201ENST00000377759 LCE3CQ5T5A8 94 aa8.74□□□□□ -1.01
SNX5-201ENST00000377759 KRTAP19-7Q3SYF9 63 aa8.69□□□□□ -1.02
SNX5-201ENST00000377759 SSPOA2VEC9 5147 aa8.66□□□□□ -1.02
SNX5-201ENST00000377759 KRTAP19-6Q3LI70 58 aa8.5□□□□□ -1.05
SNX5-201ENST00000377759 KRTAP9-6A8MVA2 160 aa8.46□□□□□ -1.05
SNX5-201ENST00000377759 MT1EP04732 61 aa8.43□□□□□ -1.06
SNX5-201ENST00000377759 KRTAP4-7Q9BYR0 210 aa8.42□□□□□ -1.06
SNX5-201ENST00000377759 MT1LQ93083 61 aa8.4□□□□□ -1.06
SNX5-201ENST00000377759 FSIP2Q5CZC0 6907 aa8.33□□□□□ -1.08
SNX5-201ENST00000377759 KRTAP19-4Q3LI73 84 aa8.32□□□□□ -1.08
SNX5-201ENST00000377759 INE1O15225 51 aa8.32□□□□□ -1.08
SNX5-201ENST00000377759 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
SNX5-201ENST00000377759 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
SNX5-201ENST00000377759 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms