RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 PKHD1L1Q86WI1 4243 aa10.94□□□□□ -0.66
SHB-201ENST00000377707 CRIPTQ9P021 101 aa10.93□□□□□ -0.66
SHB-201ENST00000377707 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
SHB-201ENST00000377707 FLG2Q5D862 2391 aaPredicted RBP10.84□□□□□ -0.67
SHB-201ENST00000377707 Q5VSD8 79 aa10.84□□□□□ -0.67
SHB-201ENST00000377707 KRTAP3-1Q9BYR8 98 aa10.84□□□□□ -0.67
SHB-201ENST00000377707 H0YAA0 97 aa10.81□□□□□ -0.68
SHB-201ENST00000377707 LUZP6Q538Z0 58 aa10.8□□□□□ -0.68
SHB-201ENST00000377707 KRTAP15-1Q3LI76 137 aa10.8□□□□□ -0.68
SHB-201ENST00000377707 DMBT1Q9UGM3 2413 aaPredicted RBP10.77□□□□□ -0.69
SHB-201ENST00000377707 RPS29P62273 56 aaKnown RBP10.74□□□□□ -0.69
SHB-201ENST00000377707 FAT3Q8TDW7 4589 aa10.71□□□□□ -0.7
SHB-201ENST00000377707 K7ERS5 55 aa10.7□□□□□ -0.7
SHB-201ENST00000377707 J3QL48 77 aa10.68□□□□□ -0.7
SHB-201ENST00000377707 TNXBP22105 4242 aa10.67□□□□□ -0.7
SHB-201ENST00000377707 KRTAP4-5Q9BYR2 181 aa10.62□□□□□ -0.71
SHB-201ENST00000377707 A0A1B0GU33 70 aa10.57□□□□□ -0.72
SHB-201ENST00000377707 SEC61BP60468 96 aaKnown RBP10.56□□□□□ -0.72
SHB-201ENST00000377707 LPAP08519 4548 aa10.52□□□□□ -0.72
SHB-201ENST00000377707 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
SHB-201ENST00000377707 ABCA13Q86UQ4 5058 aa10.5□□□□□ -0.73
SHB-201ENST00000377707 KRTAP10-8P60410 259 aa10.49□□□□□ -0.73
SHB-201ENST00000377707 H1FX-AS1Q4G0G2 97 aa10.49□□□□□ -0.73
SHB-201ENST00000377707 BIRC6Q9NR09 4857 aa10.49□□□□□ -0.73
SHB-201ENST00000377707 COX6B2Q6YFQ2 88 aa10.48□□□□□ -0.73
SHB-201ENST00000377707 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
SHB-201ENST00000377707 HERC2O95714 4834 aa10.41□□□□□ -0.74
SHB-201ENST00000377707 KRTAP3-3Q9BYR6 98 aa10.34□□□□□ -0.75
SHB-201ENST00000377707 LRP2P98164 4655 aa10.34□□□□□ -0.75
SHB-201ENST00000377707 XP32Q5T750 250 aa10.31□□□□□ -0.76
SHB-201ENST00000377707 A0A0D9SG42 100 aa10.3□□□□□ -0.76
SHB-201ENST00000377707 C10orf95Q9H7T3 257 aa10.3□□□□□ -0.76
SHB-201ENST00000377707 KRTAP13-4Q3LI77 160 aa10.28□□□□□ -0.76
SHB-201ENST00000377707 RPL37P61927 97 aaKnown RBP10.26□□□□□ -0.77
SHB-201ENST00000377707 KRTAP10-6P60371 365 aaPredicted RBP10.26□□□□□ -0.77
SHB-201ENST00000377707 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
SHB-201ENST00000377707 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
SHB-201ENST00000377707 S4R3F8 94 aa10.16□□□□□ -0.78
SHB-201ENST00000377707 HERC1Q15751 4861 aa10.04□□□□□ -0.8
SHB-201ENST00000377707 KRTAP12-2P59991 146 aa9.92□□□□□ -0.82
SHB-201ENST00000377707 KRTAP12-1P59990 96 aa9.76□□□□□ -0.85
SHB-201ENST00000377707 MUC2Q02817 5179 aa9.75□□□□□ -0.85
SHB-201ENST00000377707 CAMK2N1Q7Z7J9 78 aa9.74□□□□□ -0.85
SHB-201ENST00000377707 HMCN2Q8NDA2 5059 aa9.72□□□□□ -0.85
SHB-201ENST00000377707 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
SHB-201ENST00000377707 MUC17Q685J3 4493 aa9.67□□□□□ -0.86
SHB-201ENST00000377707 M0QZ58 72 aa9.58□□□□□ -0.88
SHB-201ENST00000377707 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
SHB-201ENST00000377707 KRTAP4-1Q9BYQ7 146 aa9.56□□□□□ -0.88
SHB-201ENST00000377707 R4GN34 69 aa9.5□□□□□ -0.89
SHB-201ENST00000377707 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.89
SHB-201ENST00000377707 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
SHB-201ENST00000377707 PRO2289Q9P1D8 64 aa9.33□□□□□ -0.92
SHB-201ENST00000377707 FAT4Q6V0I7 4981 aa9.24□□□□□ -0.93
SHB-201ENST00000377707 KRTAP19-2Q3LHN2 52 aa9.22□□□□□ -0.93
SHB-201ENST00000377707 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
SHB-201ENST00000377707 FLGP20930 4061 aaPredicted RBP9.13□□□□□ -0.95
SHB-201ENST00000377707 LCE2CQ5TA81 110 aa8.96□□□□□ -0.97
SHB-201ENST00000377707 PP632Q6XCG6 107 aa8.89□□□□□ -0.99
SHB-201ENST00000377707 INE1O15225 51 aa8.86□□□□□ -0.99
SHB-201ENST00000377707 MT1HP80294 61 aa8.78□□□□□ -1
SHB-201ENST00000377707 M0R2T5 61 aa8.77□□□□□ -1.01
SHB-201ENST00000377707 SPRR5A0A1B0GTR4 108 aa8.76□□□□□ -1.01
SHB-201ENST00000377707 TNP1P09430 55 aa8.6□□□□□ -1.03
SHB-201ENST00000377707 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
SHB-201ENST00000377707 KRTAP9-8Q9BYQ0 159 aa8.46□□□□□ -1.06
SHB-201ENST00000377707 MT2AP02795 61 aa8.44□□□□□ -1.06
SHB-201ENST00000377707 MT1FP04733 61 aa8.44□□□□□ -1.06
SHB-201ENST00000377707 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
SHB-201ENST00000377707 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
SHB-201ENST00000377707 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
SHB-201ENST00000377707 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
SHB-201ENST00000377707 LCE3AQ5TA76 89 aa8.29□□□□□ -1.08
SHB-201ENST00000377707 LCE2BO14633 110 aa8.25□□□□□ -1.09
SHB-201ENST00000377707 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
SHB-201ENST00000377707 USH2AO75445 5202 aa8.12□□□□□ -1.11
SHB-201ENST00000377707 MT1BP07438 61 aa8.06□□□□□ -1.12
SHB-201ENST00000377707 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
SHB-201ENST00000377707 MT1XP80297 61 aa8.03□□□□□ -1.12
SHB-201ENST00000377707 KMT2DO14686 5537 aa8.01□□□□□ -1.13
SHB-201ENST00000377707 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
SHB-201ENST00000377707 FSIP2Q5CZC0 6907 aa7.95□□□□□ -1.14
SHB-201ENST00000377707 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
SHB-201ENST00000377707 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
SHB-201ENST00000377707 KRTAP10-12P60413 245 aa7.86□□□□□ -1.15
SHB-201ENST00000377707 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
SHB-201ENST00000377707 SSPOA2VEC9 5147 aa7.67□□□□□ -1.18
SHB-201ENST00000377707 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
SHB-201ENST00000377707 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
SHB-201ENST00000377707 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
SHB-201ENST00000377707 LCE3CQ5T5A8 94 aa7.32□□□□□ -1.24
SHB-201ENST00000377707 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
SHB-201ENST00000377707 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
SHB-201ENST00000377707 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
SHB-201ENST00000377707 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
SHB-201ENST00000377707 KRTAP9-6A8MVA2 160 aa7.25□□□□□ -1.25
SHB-201ENST00000377707 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
SHB-201ENST00000377707 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
SHB-201ENST00000377707 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
SHB-201ENST00000377707 MUC12Q9UKN1 5478 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms