RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
TRIM27-202ENST00000377199 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
TRIM27-202ENST00000377199 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
TRIM27-202ENST00000377199 KRTAP10-8P60410 259 aa8.44□□□□□ -1.06
TRIM27-202ENST00000377199 RYR1P21817 5038 aa8.44□□□□□ -1.06
TRIM27-202ENST00000377199 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
TRIM27-202ENST00000377199 XP32Q5T750 250 aa8.41□□□□□ -1.06
TRIM27-202ENST00000377199 LPAP08519 4548 aa8.4□□□□□ -1.07
TRIM27-202ENST00000377199 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
TRIM27-202ENST00000377199 A0A0D9SG42 100 aa8.34□□□□□ -1.07
TRIM27-202ENST00000377199 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
TRIM27-202ENST00000377199 LINC01554Q52M75 96 aa8.33□□□□□ -1.08
TRIM27-202ENST00000377199 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
TRIM27-202ENST00000377199 LRP2P98164 4655 aa8.31□□□□□ -1.08
TRIM27-202ENST00000377199 S4R3F8 94 aa8.29□□□□□ -1.08
TRIM27-202ENST00000377199 EPPK1P58107 5090 aaKnown RBP8.29□□□□□ -1.08
TRIM27-202ENST00000377199 K7ERS5 55 aa8.25□□□□□ -1.09
TRIM27-202ENST00000377199 KRTAP10-6P60371 365 aaPredicted RBP8.24□□□□□ -1.09
TRIM27-202ENST00000377199 KRTAP13-4Q3LI77 160 aa8.24□□□□□ -1.09
TRIM27-202ENST00000377199 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
TRIM27-202ENST00000377199 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
TRIM27-202ENST00000377199 P0C880 135 aa8.2□□□□□ -1.1
TRIM27-202ENST00000377199 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
TRIM27-202ENST00000377199 KRTAP25-1Q3LHN0 102 aa8.13□□□□□ -1.11
TRIM27-202ENST00000377199 KRTAP4-5Q9BYR2 181 aa8.05□□□□□ -1.12
TRIM27-202ENST00000377199 ROMO1P60602 79 aa8.04□□□□□ -1.12
TRIM27-202ENST00000377199 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
TRIM27-202ENST00000377199 TPRXLQ17RH7 258 aa7.99□□□□□ -1.13
TRIM27-202ENST00000377199 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
TRIM27-202ENST00000377199 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
TRIM27-202ENST00000377199 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
TRIM27-202ENST00000377199 MUC2Q02817 5179 aa7.85□□□□□ -1.15
TRIM27-202ENST00000377199 M0QZ58 72 aa7.81□□□□□ -1.16
TRIM27-202ENST00000377199 J3QL48 77 aa7.81□□□□□ -1.16
TRIM27-202ENST00000377199 HERC2O95714 4834 aa7.81□□□□□ -1.16
TRIM27-202ENST00000377199 R4GN34 69 aa7.77□□□□□ -1.17
TRIM27-202ENST00000377199 MUC17Q685J3 4493 aa7.75□□□□□ -1.17
TRIM27-202ENST00000377199 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
TRIM27-202ENST00000377199 KRTAP4-1Q9BYQ7 146 aa7.74□□□□□ -1.17
TRIM27-202ENST00000377199 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
TRIM27-202ENST00000377199 HERC1Q15751 4861 aa7.55□□□□□ -1.2
TRIM27-202ENST00000377199 A0A0A0MQY5 61 aa7.52□□□□□ -1.21
TRIM27-202ENST00000377199 PCLOQ9Y6V0 5065 aa7.46□□□□□ -1.22
TRIM27-202ENST00000377199 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
TRIM27-202ENST00000377199 KRTAP19-2Q3LHN2 52 aa7.43□□□□□ -1.22
TRIM27-202ENST00000377199 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
TRIM27-202ENST00000377199 BIRC6Q9NR09 4857 aa7.4□□□□□ -1.22
TRIM27-202ENST00000377199 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
TRIM27-202ENST00000377199 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
TRIM27-202ENST00000377199 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
TRIM27-202ENST00000377199 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
TRIM27-202ENST00000377199 HMCN2Q8NDA2 5059 aa7.31□□□□□ -1.24
TRIM27-202ENST00000377199 UBR4Q5T4S7 5183 aa7.2□□□□□ -1.26
TRIM27-202ENST00000377199 M0R2T5 61 aa7.15□□□□□ -1.26
TRIM27-202ENST00000377199 PLAC4Q8WY50 150 aa7.15□□□□□ -1.26
TRIM27-202ENST00000377199 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
TRIM27-202ENST00000377199 TNP1P09430 55 aa7.01□□□□□ -1.29
TRIM27-202ENST00000377199 PP632Q6XCG6 107 aa7□□□□□ -1.29
TRIM27-202ENST00000377199 MT1HP80294 61 aa6.91□□□□□ -1.3
TRIM27-202ENST00000377199 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
TRIM27-202ENST00000377199 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
TRIM27-202ENST00000377199 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
TRIM27-202ENST00000377199 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
TRIM27-202ENST00000377199 MT1FP04733 61 aa6.83□□□□□ -1.32
TRIM27-202ENST00000377199 MT2AP02795 61 aa6.8□□□□□ -1.32
TRIM27-202ENST00000377199 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
TRIM27-202ENST00000377199 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
TRIM27-202ENST00000377199 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
TRIM27-202ENST00000377199 USH2AO75445 5202 aa6.57□□□□□ -1.36
TRIM27-202ENST00000377199 MT1BP07438 61 aa6.54□□□□□ -1.36
TRIM27-202ENST00000377199 KRTAP10-5P60370 271 aa6.51□□□□□ -1.37
TRIM27-202ENST00000377199 KRTAP19-8Q3LI54 63 aa6.51□□□□□ -1.37
TRIM27-202ENST00000377199 MT1XP80297 61 aa6.5□□□□□ -1.37
TRIM27-202ENST00000377199 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
TRIM27-202ENST00000377199 KMT2DO14686 5537 aa6.42□□□□□ -1.38
TRIM27-202ENST00000377199 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
TRIM27-202ENST00000377199 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
TRIM27-202ENST00000377199 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
TRIM27-202ENST00000377199 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
TRIM27-202ENST00000377199 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
TRIM27-202ENST00000377199 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
TRIM27-202ENST00000377199 LCE2BO14633 110 aa6.24□□□□□ -1.41
TRIM27-202ENST00000377199 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
TRIM27-202ENST00000377199 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
TRIM27-202ENST00000377199 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
TRIM27-202ENST00000377199 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
TRIM27-202ENST00000377199 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.45
TRIM27-202ENST00000377199 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
TRIM27-202ENST00000377199 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
TRIM27-202ENST00000377199 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
TRIM27-202ENST00000377199 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
TRIM27-202ENST00000377199 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
TRIM27-202ENST00000377199 INE1O15225 51 aa5.67□□□□□ -1.5
TRIM27-202ENST00000377199 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.5
TRIM27-202ENST00000377199 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
TRIM27-202ENST00000377199 MT1EP04732 61 aa5.61□□□□□ -1.51
TRIM27-202ENST00000377199 MT1LQ93083 61 aa5.61□□□□□ -1.51
TRIM27-202ENST00000377199 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
TRIM27-202ENST00000377199 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
TRIM27-202ENST00000377199 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms