RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 LRP2P98164 4655 aa7.5□□□□□ -1.21
CPT1A-202ENST00000376618 A8MUU9 505 aa7.49□□□□□ -1.21
CPT1A-202ENST00000376618 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
CPT1A-202ENST00000376618 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
CPT1A-202ENST00000376618 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
CPT1A-202ENST00000376618 A6NN06 94 aa7.41□□□□□ -1.22
CPT1A-202ENST00000376618 KRTAP10-8P60410 259 aa7.4□□□□□ -1.22
CPT1A-202ENST00000376618 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
CPT1A-202ENST00000376618 MIR22HGQ0VDD5 57 aa7.34□□□□□ -1.23
CPT1A-202ENST00000376618 UQCR11O14957 56 aa7.32□□□□□ -1.24
CPT1A-202ENST00000376618 PRAC1Q96KF2 57 aa7.3□□□□□ -1.24
CPT1A-202ENST00000376618 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
CPT1A-202ENST00000376618 XP32Q5T750 250 aa7.3□□□□□ -1.24
CPT1A-202ENST00000376618 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
CPT1A-202ENST00000376618 SPATA8Q6RVD6 105 aa7.29□□□□□ -1.24
CPT1A-202ENST00000376618 MT1HL1P0DM35 61 aa7.29□□□□□ -1.24
CPT1A-202ENST00000376618 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
CPT1A-202ENST00000376618 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
CPT1A-202ENST00000376618 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
CPT1A-202ENST00000376618 H0YAA0 97 aa7.24□□□□□ -1.25
CPT1A-202ENST00000376618 MUC2Q02817 5179 aa7.23□□□□□ -1.25
CPT1A-202ENST00000376618 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.25
CPT1A-202ENST00000376618 RBM12B-AS1Q9P1G2 102 aa7.17□□□□□ -1.26
CPT1A-202ENST00000376618 A0A1B0GU33 70 aa7.16□□□□□ -1.26
CPT1A-202ENST00000376618 HERC2O95714 4834 aa7.13□□□□□ -1.27
CPT1A-202ENST00000376618 H1FX-AS1Q4G0G2 97 aa7.11□□□□□ -1.27
CPT1A-202ENST00000376618 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
CPT1A-202ENST00000376618 A0A0D9SG42 100 aa7.06□□□□□ -1.28
CPT1A-202ENST00000376618 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
CPT1A-202ENST00000376618 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
CPT1A-202ENST00000376618 P0C880 135 aa7.04□□□□□ -1.28
CPT1A-202ENST00000376618 S4R3F8 94 aa7.04□□□□□ -1.28
CPT1A-202ENST00000376618 CSAG1Q6PB30 78 aa7□□□□□ -1.29
CPT1A-202ENST00000376618 HERC1Q15751 4861 aa7□□□□□ -1.29
CPT1A-202ENST00000376618 MUC17Q685J3 4493 aa6.96□□□□□ -1.3
CPT1A-202ENST00000376618 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
CPT1A-202ENST00000376618 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
CPT1A-202ENST00000376618 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
CPT1A-202ENST00000376618 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.32
CPT1A-202ENST00000376618 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
CPT1A-202ENST00000376618 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
CPT1A-202ENST00000376618 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
CPT1A-202ENST00000376618 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
CPT1A-202ENST00000376618 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
CPT1A-202ENST00000376618 K7ERS5 55 aa6.75□□□□□ -1.33
CPT1A-202ENST00000376618 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
CPT1A-202ENST00000376618 KRTAP25-1Q3LHN0 102 aa6.7□□□□□ -1.34
CPT1A-202ENST00000376618 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
CPT1A-202ENST00000376618 ROMO1P60602 79 aa6.66□□□□□ -1.34
CPT1A-202ENST00000376618 HMCN2Q8NDA2 5059 aa6.65□□□□□ -1.35
CPT1A-202ENST00000376618 M0QZ58 72 aa6.63□□□□□ -1.35
CPT1A-202ENST00000376618 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
CPT1A-202ENST00000376618 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
CPT1A-202ENST00000376618 R4GN34 69 aa6.58□□□□□ -1.36
CPT1A-202ENST00000376618 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
CPT1A-202ENST00000376618 CAMK2N1Q7Z7J9 78 aa6.24□□□□□ -1.41
CPT1A-202ENST00000376618 M0R2T5 61 aa6.21□□□□□ -1.41
CPT1A-202ENST00000376618 MT1HP80294 61 aa6.12□□□□□ -1.43
CPT1A-202ENST00000376618 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
CPT1A-202ENST00000376618 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
CPT1A-202ENST00000376618 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
CPT1A-202ENST00000376618 USH2AO75445 5202 aa6.04□□□□□ -1.44
CPT1A-202ENST00000376618 MT1FP04733 61 aa6.03□□□□□ -1.44
CPT1A-202ENST00000376618 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
CPT1A-202ENST00000376618 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
CPT1A-202ENST00000376618 MT2AP02795 61 aa5.98□□□□□ -1.45
CPT1A-202ENST00000376618 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
CPT1A-202ENST00000376618 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
CPT1A-202ENST00000376618 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
CPT1A-202ENST00000376618 TNP1P09430 55 aa5.88□□□□□ -1.47
CPT1A-202ENST00000376618 KMT2DO14686 5537 aa5.84□□□□□ -1.47
CPT1A-202ENST00000376618 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
CPT1A-202ENST00000376618 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
CPT1A-202ENST00000376618 MT1BP07438 61 aa5.75□□□□□ -1.49
CPT1A-202ENST00000376618 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
CPT1A-202ENST00000376618 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
CPT1A-202ENST00000376618 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
CPT1A-202ENST00000376618 MT1XP80297 61 aa5.68□□□□□ -1.5
CPT1A-202ENST00000376618 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
CPT1A-202ENST00000376618 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
CPT1A-202ENST00000376618 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
CPT1A-202ENST00000376618 KRTAP9-4Q9BYQ2 154 aa5.46□□□□□ -1.53
CPT1A-202ENST00000376618 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
CPT1A-202ENST00000376618 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
CPT1A-202ENST00000376618 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
CPT1A-202ENST00000376618 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
CPT1A-202ENST00000376618 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
CPT1A-202ENST00000376618 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
CPT1A-202ENST00000376618 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
CPT1A-202ENST00000376618 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
CPT1A-202ENST00000376618 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
CPT1A-202ENST00000376618 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
CPT1A-202ENST00000376618 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
CPT1A-202ENST00000376618 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
CPT1A-202ENST00000376618 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
CPT1A-202ENST00000376618 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
CPT1A-202ENST00000376618 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
CPT1A-202ENST00000376618 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
CPT1A-202ENST00000376618 MUC12Q9UKN1 5478 aa5.13□□□□□ -1.59
CPT1A-202ENST00000376618 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms