RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
DDR1-224ENST00000376567 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
DDR1-224ENST00000376567 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.38
DDR1-224ENST00000376567 HECTD4Q9Y4D8 3996 aa6.39□□□□□ -1.39
DDR1-224ENST00000376567 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
DDR1-224ENST00000376567 PKHD1P08F94 4074 aa6.38□□□□□ -1.39
DDR1-224ENST00000376567 P0C880 135 aa6.38□□□□□ -1.39
DDR1-224ENST00000376567 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
DDR1-224ENST00000376567 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
DDR1-224ENST00000376567 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
DDR1-224ENST00000376567 LRP1Q07954 4544 aaKnown RBP6.33□□□□□ -1.4
DDR1-224ENST00000376567 ROMO1P60602 79 aa6.32□□□□□ -1.4
DDR1-224ENST00000376567 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
DDR1-224ENST00000376567 FAT2Q9NYQ8 4349 aa6.31□□□□□ -1.4
DDR1-224ENST00000376567 KMT2CQ8NEZ4 4911 aaKnown RBP6.3□□□□□ -1.4
DDR1-224ENST00000376567 RYR1P21817 5038 aa6.29□□□□□ -1.4
DDR1-224ENST00000376567 RYR2Q92736 4967 aa6.28□□□□□ -1.4
DDR1-224ENST00000376567 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
DDR1-224ENST00000376567 APOBP04114 4563 aaKnown RBP6.24□□□□□ -1.41
DDR1-224ENST00000376567 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
DDR1-224ENST00000376567 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
DDR1-224ENST00000376567 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
DDR1-224ENST00000376567 PKD1P98161 4303 aa6.21□□□□□ -1.42
DDR1-224ENST00000376567 RYR3Q15413 4870 aa6.21□□□□□ -1.42
DDR1-224ENST00000376567 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
DDR1-224ENST00000376567 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
DDR1-224ENST00000376567 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
DDR1-224ENST00000376567 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
DDR1-224ENST00000376567 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
DDR1-224ENST00000376567 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
DDR1-224ENST00000376567 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
DDR1-224ENST00000376567 LRP2P98164 4655 aa6□□□□□ -1.45
DDR1-224ENST00000376567 HSPG2P98160 4391 aa5.97□□□□□ -1.45
DDR1-224ENST00000376567 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
DDR1-224ENST00000376567 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
DDR1-224ENST00000376567 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
DDR1-224ENST00000376567 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
DDR1-224ENST00000376567 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
DDR1-224ENST00000376567 LPAP08519 4548 aa5.84□□□□□ -1.48
DDR1-224ENST00000376567 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
DDR1-224ENST00000376567 HERC2O95714 4834 aa5.82□□□□□ -1.48
DDR1-224ENST00000376567 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
DDR1-224ENST00000376567 PKHD1L1Q86WI1 4243 aa5.76□□□□□ -1.49
DDR1-224ENST00000376567 TNP1P09430 55 aa5.76□□□□□ -1.49
DDR1-224ENST00000376567 TNXBP22105 4242 aa5.72□□□□□ -1.49
DDR1-224ENST00000376567 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
DDR1-224ENST00000376567 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
DDR1-224ENST00000376567 MUC2Q02817 5179 aa5.65□□□□□ -1.51
DDR1-224ENST00000376567 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
DDR1-224ENST00000376567 HERC1Q15751 4861 aa5.52□□□□□ -1.53
DDR1-224ENST00000376567 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
DDR1-224ENST00000376567 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
DDR1-224ENST00000376567 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
DDR1-224ENST00000376567 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
DDR1-224ENST00000376567 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
DDR1-224ENST00000376567 MT1HP80294 61 aa5.28□□□□□ -1.56
DDR1-224ENST00000376567 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
DDR1-224ENST00000376567 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
DDR1-224ENST00000376567 MT1FP04733 61 aa5.22□□□□□ -1.57
DDR1-224ENST00000376567 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
DDR1-224ENST00000376567 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
DDR1-224ENST00000376567 MT2AP02795 61 aa5.21□□□□□ -1.57
DDR1-224ENST00000376567 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
DDR1-224ENST00000376567 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
DDR1-224ENST00000376567 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
DDR1-224ENST00000376567 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
DDR1-224ENST00000376567 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
DDR1-224ENST00000376567 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
DDR1-224ENST00000376567 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
DDR1-224ENST00000376567 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
DDR1-224ENST00000376567 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
DDR1-224ENST00000376567 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
DDR1-224ENST00000376567 USH2AO75445 5202 aa4.89□□□□□ -1.63
DDR1-224ENST00000376567 CRCT1Q9UGL9 99 aa4.89□□□□□ -1.63
DDR1-224ENST00000376567 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
DDR1-224ENST00000376567 MT1BP07438 61 aa4.85□□□□□ -1.63
DDR1-224ENST00000376567 MT1XP80297 61 aa4.82□□□□□ -1.64
DDR1-224ENST00000376567 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
DDR1-224ENST00000376567 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
DDR1-224ENST00000376567 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
DDR1-224ENST00000376567 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
DDR1-224ENST00000376567 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
DDR1-224ENST00000376567 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
DDR1-224ENST00000376567 KMT2DO14686 5537 aa4.71□□□□□ -1.66
DDR1-224ENST00000376567 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
DDR1-224ENST00000376567 LCE2BO14633 110 aa4.7□□□□□ -1.66
DDR1-224ENST00000376567 INE1O15225 51 aa4.69□□□□□ -1.66
DDR1-224ENST00000376567 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
DDR1-224ENST00000376567 LCE2AQ5TA79 106 aaPredicted RBP4.61□□□□□ -1.67
DDR1-224ENST00000376567 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
DDR1-224ENST00000376567 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
DDR1-224ENST00000376567 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
DDR1-224ENST00000376567 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
DDR1-224ENST00000376567 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
DDR1-224ENST00000376567 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
DDR1-224ENST00000376567 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
DDR1-224ENST00000376567 MT1GP13640 62 aa4.31□□□□□ -1.72
DDR1-224ENST00000376567 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
DDR1-224ENST00000376567 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
DDR1-224ENST00000376567 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms