RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 KRTAP25-1Q3LHN0 102 aa8.34□□□□□ -1.07
CCHCR1-201ENST00000376266 A8MUU9 505 aa8.33□□□□□ -1.08
CCHCR1-201ENST00000376266 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
CCHCR1-201ENST00000376266 H0YAA0 97 aa8.31□□□□□ -1.08
CCHCR1-201ENST00000376266 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
CCHCR1-201ENST00000376266 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
CCHCR1-201ENST00000376266 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
CCHCR1-201ENST00000376266 ROMO1P60602 79 aa8.29□□□□□ -1.08
CCHCR1-201ENST00000376266 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
CCHCR1-201ENST00000376266 J3QL48 77 aa8.23□□□□□ -1.09
CCHCR1-201ENST00000376266 A0A1B0GU33 70 aa8.22□□□□□ -1.09
CCHCR1-201ENST00000376266 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
CCHCR1-201ENST00000376266 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
CCHCR1-201ENST00000376266 HERC1Q15751 4861 aa8.11□□□□□ -1.11
CCHCR1-201ENST00000376266 K7ERS5 55 aa8.11□□□□□ -1.11
CCHCR1-201ENST00000376266 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
CCHCR1-201ENST00000376266 P0C880 135 aa8.05□□□□□ -1.12
CCHCR1-201ENST00000376266 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.12
CCHCR1-201ENST00000376266 COX6B2Q6YFQ2 88 aa7.98□□□□□ -1.13
CCHCR1-201ENST00000376266 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
CCHCR1-201ENST00000376266 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
CCHCR1-201ENST00000376266 LPAP08519 4548 aa7.91□□□□□ -1.14
CCHCR1-201ENST00000376266 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.14
CCHCR1-201ENST00000376266 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
CCHCR1-201ENST00000376266 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
CCHCR1-201ENST00000376266 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
CCHCR1-201ENST00000376266 LRP2P98164 4655 aa7.82□□□□□ -1.16
CCHCR1-201ENST00000376266 A0A0D9SG42 100 aa7.81□□□□□ -1.16
CCHCR1-201ENST00000376266 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
CCHCR1-201ENST00000376266 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CCHCR1-201ENST00000376266 NDUFAF8A1L188 74 aa7.74□□□□□ -1.17
CCHCR1-201ENST00000376266 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
CCHCR1-201ENST00000376266 XP32Q5T750 250 aa7.72□□□□□ -1.17
CCHCR1-201ENST00000376266 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
CCHCR1-201ENST00000376266 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
CCHCR1-201ENST00000376266 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
CCHCR1-201ENST00000376266 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
CCHCR1-201ENST00000376266 S4R3F8 94 aa7.6□□□□□ -1.19
CCHCR1-201ENST00000376266 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
CCHCR1-201ENST00000376266 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
CCHCR1-201ENST00000376266 SEC61BP60468 96 aaKnown RBP7.54□□□□□ -1.2
CCHCR1-201ENST00000376266 MUC2Q02817 5179 aa7.54□□□□□ -1.2
CCHCR1-201ENST00000376266 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
CCHCR1-201ENST00000376266 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
CCHCR1-201ENST00000376266 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
CCHCR1-201ENST00000376266 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
CCHCR1-201ENST00000376266 M0QZ58 72 aa7.28□□□□□ -1.24
CCHCR1-201ENST00000376266 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
CCHCR1-201ENST00000376266 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
CCHCR1-201ENST00000376266 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
CCHCR1-201ENST00000376266 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
CCHCR1-201ENST00000376266 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
CCHCR1-201ENST00000376266 R4GN34 69 aa7.05□□□□□ -1.28
CCHCR1-201ENST00000376266 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
CCHCR1-201ENST00000376266 MT1HP80294 61 aa7.01□□□□□ -1.29
CCHCR1-201ENST00000376266 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
CCHCR1-201ENST00000376266 M0R2T5 61 aa6.93□□□□□ -1.3
CCHCR1-201ENST00000376266 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
CCHCR1-201ENST00000376266 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
CCHCR1-201ENST00000376266 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
CCHCR1-201ENST00000376266 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.33
CCHCR1-201ENST00000376266 MT2AP02795 61 aa6.66□□□□□ -1.34
CCHCR1-201ENST00000376266 MT1FP04733 61 aa6.63□□□□□ -1.35
CCHCR1-201ENST00000376266 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
CCHCR1-201ENST00000376266 TNP1P09430 55 aa6.54□□□□□ -1.36
CCHCR1-201ENST00000376266 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
CCHCR1-201ENST00000376266 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
CCHCR1-201ENST00000376266 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
CCHCR1-201ENST00000376266 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
CCHCR1-201ENST00000376266 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
CCHCR1-201ENST00000376266 LCE2BO14633 110 aa6.36□□□□□ -1.39
CCHCR1-201ENST00000376266 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
CCHCR1-201ENST00000376266 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
CCHCR1-201ENST00000376266 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
CCHCR1-201ENST00000376266 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
CCHCR1-201ENST00000376266 USH2AO75445 5202 aa6.31□□□□□ -1.4
CCHCR1-201ENST00000376266 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
CCHCR1-201ENST00000376266 MT1BP07438 61 aa6.19□□□□□ -1.42
CCHCR1-201ENST00000376266 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
CCHCR1-201ENST00000376266 INE1O15225 51 aa6.16□□□□□ -1.42
CCHCR1-201ENST00000376266 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
CCHCR1-201ENST00000376266 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
CCHCR1-201ENST00000376266 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
CCHCR1-201ENST00000376266 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
CCHCR1-201ENST00000376266 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CCHCR1-201ENST00000376266 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
CCHCR1-201ENST00000376266 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
CCHCR1-201ENST00000376266 MT1XP80297 61 aa5.93□□□□□ -1.46
CCHCR1-201ENST00000376266 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CCHCR1-201ENST00000376266 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
CCHCR1-201ENST00000376266 KMT2DO14686 5537 aa5.72□□□□□ -1.49
CCHCR1-201ENST00000376266 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
CCHCR1-201ENST00000376266 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
CCHCR1-201ENST00000376266 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
CCHCR1-201ENST00000376266 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
CCHCR1-201ENST00000376266 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
CCHCR1-201ENST00000376266 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
CCHCR1-201ENST00000376266 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
CCHCR1-201ENST00000376266 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
CCHCR1-201ENST00000376266 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms