RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 KRTAP25-1Q3LHN0 102 aa8.34□□□□□ -1.07
CCHCR1-201ENST00000376266 A8MUU9 505 aa8.33□□□□□ -1.08
CCHCR1-201ENST00000376266 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
CCHCR1-201ENST00000376266 H0YAA0 97 aa8.31□□□□□ -1.08
CCHCR1-201ENST00000376266 KRTAP10-8P60410 259 aa8.31□□□□□ -1.08
CCHCR1-201ENST00000376266 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
CCHCR1-201ENST00000376266 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
CCHCR1-201ENST00000376266 ROMO1P60602 79 aa8.29□□□□□ -1.08
CCHCR1-201ENST00000376266 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
CCHCR1-201ENST00000376266 J3QL48 77 aa8.23□□□□□ -1.09
CCHCR1-201ENST00000376266 A0A1B0GU33 70 aa8.22□□□□□ -1.09
CCHCR1-201ENST00000376266 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
CCHCR1-201ENST00000376266 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
CCHCR1-201ENST00000376266 HERC1Q15751 4861 aa8.11□□□□□ -1.11
CCHCR1-201ENST00000376266 K7ERS5 55 aa8.11□□□□□ -1.11
CCHCR1-201ENST00000376266 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
CCHCR1-201ENST00000376266 P0C880 135 aa8.05□□□□□ -1.12
CCHCR1-201ENST00000376266 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.12
CCHCR1-201ENST00000376266 COX6B2Q6YFQ2 88 aa7.98□□□□□ -1.13
CCHCR1-201ENST00000376266 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
CCHCR1-201ENST00000376266 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
CCHCR1-201ENST00000376266 LPAP08519 4548 aa7.91□□□□□ -1.14
CCHCR1-201ENST00000376266 HMCN2Q8NDA2 5059 aa7.9□□□□□ -1.14
CCHCR1-201ENST00000376266 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
CCHCR1-201ENST00000376266 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
CCHCR1-201ENST00000376266 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
CCHCR1-201ENST00000376266 LRP2P98164 4655 aa7.82□□□□□ -1.16
CCHCR1-201ENST00000376266 A0A0D9SG42 100 aa7.81□□□□□ -1.16
CCHCR1-201ENST00000376266 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
CCHCR1-201ENST00000376266 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CCHCR1-201ENST00000376266 NDUFAF8A1L188 74 aa7.74□□□□□ -1.17
CCHCR1-201ENST00000376266 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
CCHCR1-201ENST00000376266 XP32Q5T750 250 aa7.72□□□□□ -1.17
CCHCR1-201ENST00000376266 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
CCHCR1-201ENST00000376266 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
CCHCR1-201ENST00000376266 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
CCHCR1-201ENST00000376266 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
CCHCR1-201ENST00000376266 S4R3F8 94 aa7.6□□□□□ -1.19
CCHCR1-201ENST00000376266 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
CCHCR1-201ENST00000376266 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
CCHCR1-201ENST00000376266 SEC61BP60468 96 aaKnown RBP7.54□□□□□ -1.2
CCHCR1-201ENST00000376266 MUC2Q02817 5179 aa7.54□□□□□ -1.2
CCHCR1-201ENST00000376266 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
CCHCR1-201ENST00000376266 A0A0A0MQY5 61 aa7.46□□□□□ -1.22
CCHCR1-201ENST00000376266 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
CCHCR1-201ENST00000376266 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
CCHCR1-201ENST00000376266 M0QZ58 72 aa7.28□□□□□ -1.24
CCHCR1-201ENST00000376266 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
CCHCR1-201ENST00000376266 KRTAP19-2Q3LHN2 52 aa7.19□□□□□ -1.26
CCHCR1-201ENST00000376266 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
CCHCR1-201ENST00000376266 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
CCHCR1-201ENST00000376266 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
CCHCR1-201ENST00000376266 R4GN34 69 aa7.05□□□□□ -1.28
CCHCR1-201ENST00000376266 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
CCHCR1-201ENST00000376266 MT1HP80294 61 aa7.01□□□□□ -1.29
CCHCR1-201ENST00000376266 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
CCHCR1-201ENST00000376266 M0R2T5 61 aa6.93□□□□□ -1.3
CCHCR1-201ENST00000376266 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
CCHCR1-201ENST00000376266 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
CCHCR1-201ENST00000376266 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
CCHCR1-201ENST00000376266 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.33
CCHCR1-201ENST00000376266 MT2AP02795 61 aa6.66□□□□□ -1.34
CCHCR1-201ENST00000376266 MT1FP04733 61 aa6.63□□□□□ -1.35
CCHCR1-201ENST00000376266 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
CCHCR1-201ENST00000376266 TNP1P09430 55 aa6.54□□□□□ -1.36
CCHCR1-201ENST00000376266 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
CCHCR1-201ENST00000376266 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
CCHCR1-201ENST00000376266 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
CCHCR1-201ENST00000376266 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
CCHCR1-201ENST00000376266 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
CCHCR1-201ENST00000376266 LCE2BO14633 110 aa6.36□□□□□ -1.39
CCHCR1-201ENST00000376266 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
CCHCR1-201ENST00000376266 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
CCHCR1-201ENST00000376266 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
CCHCR1-201ENST00000376266 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
CCHCR1-201ENST00000376266 USH2AO75445 5202 aa6.31□□□□□ -1.4
CCHCR1-201ENST00000376266 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
CCHCR1-201ENST00000376266 MT1BP07438 61 aa6.19□□□□□ -1.42
CCHCR1-201ENST00000376266 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
CCHCR1-201ENST00000376266 INE1O15225 51 aa6.16□□□□□ -1.42
CCHCR1-201ENST00000376266 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
CCHCR1-201ENST00000376266 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
CCHCR1-201ENST00000376266 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
CCHCR1-201ENST00000376266 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
CCHCR1-201ENST00000376266 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CCHCR1-201ENST00000376266 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
CCHCR1-201ENST00000376266 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
CCHCR1-201ENST00000376266 MT1XP80297 61 aa5.93□□□□□ -1.46
CCHCR1-201ENST00000376266 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CCHCR1-201ENST00000376266 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
CCHCR1-201ENST00000376266 KMT2DO14686 5537 aa5.72□□□□□ -1.49
CCHCR1-201ENST00000376266 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
CCHCR1-201ENST00000376266 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
CCHCR1-201ENST00000376266 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
CCHCR1-201ENST00000376266 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
CCHCR1-201ENST00000376266 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
CCHCR1-201ENST00000376266 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
CCHCR1-201ENST00000376266 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
CCHCR1-201ENST00000376266 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
CCHCR1-201ENST00000376266 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms