RNA–Protein interactions for RNA: ENST00000376088.7

CLCN5-202, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 2 BASIC

Gene CLCN5, Length 10,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-202ENST00000376088 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
CLCN5-202ENST00000376088 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
CLCN5-202ENST00000376088 CSMD3Q7Z407 3707 aa2.25□□□□□ -2.05
CLCN5-202ENST00000376088 SPRR5A0A1B0GTR4 108 aa2.24□□□□□ -2.05
CLCN5-202ENST00000376088 UBR4Q5T4S7 5183 aa2.22□□□□□ -2.05
CLCN5-202ENST00000376088 PCLOQ9Y6V0 5065 aa2.22□□□□□ -2.05
CLCN5-202ENST00000376088 DNAH2Q9P225 4427 aa2.18□□□□□ -2.06
CLCN5-202ENST00000376088 DNAH6Q9C0G6 4158 aa2.17□□□□□ -2.06
CLCN5-202ENST00000376088 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
CLCN5-202ENST00000376088 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
CLCN5-202ENST00000376088 HECTD4Q9Y4D8 3996 aa2.16□□□□□ -2.06
CLCN5-202ENST00000376088 KRTAP10-4P60372 401 aaPredicted RBP2.15□□□□□ -2.07
CLCN5-202ENST00000376088 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
CLCN5-202ENST00000376088 DNAH1Q9P2D7 4330 aa2.13□□□□□ -2.07
CLCN5-202ENST00000376088 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
CLCN5-202ENST00000376088 ABCA13Q86UQ4 5058 aa2.13□□□□□ -2.07
CLCN5-202ENST00000376088 VPS13BQ7Z7G8 4022 aa2.13□□□□□ -2.07
CLCN5-202ENST00000376088 EPPK1P58107 5090 aaKnown RBP2.12□□□□□ -2.07
CLCN5-202ENST00000376088 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
CLCN5-202ENST00000376088 RYR3Q15413 4870 aa2.12□□□□□ -2.07
CLCN5-202ENST00000376088 LYSTQ99698 3801 aa2.12□□□□□ -2.07
CLCN5-202ENST00000376088 ANK3Q12955 4377 aaKnown RBP2.1□□□□□ -2.07
CLCN5-202ENST00000376088 ANK2Q01484 3957 aa2.1□□□□□ -2.07
CLCN5-202ENST00000376088 BIRC6Q9NR09 4857 aa2.1□□□□□ -2.07
CLCN5-202ENST00000376088 MT3P25713 68 aa2.09□□□□□ -2.07
CLCN5-202ENST00000376088 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.07
CLCN5-202ENST00000376088 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.07
CLCN5-202ENST00000376088 KMT2AQ03164 3969 aa2.07□□□□□ -2.08
CLCN5-202ENST00000376088 FRAS1Q86XX4 4008 aa2.06□□□□□ -2.08
CLCN5-202ENST00000376088 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
CLCN5-202ENST00000376088 DNAH10Q8IVF4 4471 aa2.05□□□□□ -2.08
CLCN5-202ENST00000376088 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
CLCN5-202ENST00000376088 DNAH8Q96JB1 4490 aa2.02□□□□□ -2.09
CLCN5-202ENST00000376088 FLGP20930 4061 aaPredicted RBP2.02□□□□□ -2.09
CLCN5-202ENST00000376088 KMT2CQ8NEZ4 4911 aaKnown RBP2□□□□□ -2.09
CLCN5-202ENST00000376088 LORP23490 312 aaPredicted RBP2□□□□□ -2.09
CLCN5-202ENST00000376088 KRTAP10-5P60370 271 aa1.99□□□□□ -2.09
CLCN5-202ENST00000376088 RNF213Q63HN8 5207 aa1.99□□□□□ -2.09
CLCN5-202ENST00000376088 DYNC2H1Q8NCM8 4307 aaKnown RBP1.98□□□□□ -2.09
CLCN5-202ENST00000376088 HERC2O95714 4834 aa1.97□□□□□ -2.09
CLCN5-202ENST00000376088 VPS13DQ5THJ4 4388 aa1.96□□□□□ -2.1
CLCN5-202ENST00000376088 DNAH11Q96DT5 4516 aa1.96□□□□□ -2.1
CLCN5-202ENST00000376088 DNAH17Q9UFH2 4485 aa1.96□□□□□ -2.1
CLCN5-202ENST00000376088 FSIP2Q5CZC0 6907 aa1.95□□□□□ -2.1
CLCN5-202ENST00000376088 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
CLCN5-202ENST00000376088 DNAH9Q9NYC9 4486 aa1.92□□□□□ -2.1
CLCN5-202ENST00000376088 HMCN2Q8NDA2 5059 aa1.91□□□□□ -2.1
CLCN5-202ENST00000376088 DYNC1H1Q14204 4646 aaKnown RBP1.91□□□□□ -2.1
CLCN5-202ENST00000376088 FAT2Q9NYQ8 4349 aa1.9□□□□□ -2.11
CLCN5-202ENST00000376088 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
CLCN5-202ENST00000376088 PLECQ15149 4684 aaKnown RBP1.88□□□□□ -2.11
CLCN5-202ENST00000376088 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
CLCN5-202ENST00000376088 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
CLCN5-202ENST00000376088 SACSQ9NZJ4 4579 aa1.86□□□□□ -2.11
CLCN5-202ENST00000376088 KRTAP10-7P60409 375 aaPredicted RBP1.86□□□□□ -2.11
CLCN5-202ENST00000376088 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
CLCN5-202ENST00000376088 PKHD1P08F94 4074 aa1.85□□□□□ -2.11
CLCN5-202ENST00000376088 HERC1Q15751 4861 aa1.84□□□□□ -2.11
CLCN5-202ENST00000376088 HSPG2P98160 4391 aa1.84□□□□□ -2.11
CLCN5-202ENST00000376088 KRTAP19-1Q8IUB9 90 aa1.83□□□□□ -2.12
CLCN5-202ENST00000376088 MT2AP02795 61 aa1.83□□□□□ -2.12
CLCN5-202ENST00000376088 FAT1Q14517 4588 aa1.83□□□□□ -2.12
CLCN5-202ENST00000376088 MT1LQ93083 61 aa1.82□□□□□ -2.12
CLCN5-202ENST00000376088 PKD1P98161 4303 aa1.82□□□□□ -2.12
CLCN5-202ENST00000376088 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
CLCN5-202ENST00000376088 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
CLCN5-202ENST00000376088 KRTAP4-5Q9BYR2 181 aa1.82□□□□□ -2.12
CLCN5-202ENST00000376088 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
CLCN5-202ENST00000376088 MT1HP80294 61 aa1.8□□□□□ -2.12
CLCN5-202ENST00000376088 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
CLCN5-202ENST00000376088 DNAH5Q8TE73 4624 aa1.8□□□□□ -2.12
CLCN5-202ENST00000376088 PKHD1L1Q86WI1 4243 aa1.79□□□□□ -2.12
CLCN5-202ENST00000376088 MT1GP13640 62 aa1.78□□□□□ -2.12
CLCN5-202ENST00000376088 MT1XP80297 61 aa1.78□□□□□ -2.13
CLCN5-202ENST00000376088 STARD9Q9P2P6 4700 aa1.76□□□□□ -2.13
CLCN5-202ENST00000376088 MT1EP04732 61 aa1.76□□□□□ -2.13
CLCN5-202ENST00000376088 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
CLCN5-202ENST00000376088 MYCBP2O75592 4640 aa1.76□□□□□ -2.13
CLCN5-202ENST00000376088 KRTAP4-1Q9BYQ7 146 aa1.75□□□□□ -2.13
CLCN5-202ENST00000376088 MT1FP04733 61 aa1.75□□□□□ -2.13
CLCN5-202ENST00000376088 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
CLCN5-202ENST00000376088 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
CLCN5-202ENST00000376088 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
CLCN5-202ENST00000376088 TNXBP22105 4242 aa1.75□□□□□ -2.13
CLCN5-202ENST00000376088 APOBP04114 4563 aaKnown RBP1.73□□□□□ -2.13
CLCN5-202ENST00000376088 USH2AO75445 5202 aa1.73□□□□□ -2.13
CLCN5-202ENST00000376088 LRP1BQ9NZR2 4599 aa1.72□□□□□ -2.13
CLCN5-202ENST00000376088 MT1AP04731 61 aa1.7□□□□□ -2.14
CLCN5-202ENST00000376088 SPRR2AP35326 72 aa1.7□□□□□ -2.14
CLCN5-202ENST00000376088 KRTAP17-1Q9BYP8 105 aa1.7□□□□□ -2.14
CLCN5-202ENST00000376088 MT1BP07438 61 aa1.68□□□□□ -2.14
CLCN5-202ENST00000376088 SPRR2BP35325 72 aa1.67□□□□□ -2.14
CLCN5-202ENST00000376088 LCE3BQ5TA77 95 aa1.65□□□□□ -2.14
CLCN5-202ENST00000376088 KRTAP9-8Q9BYQ0 159 aa1.65□□□□□ -2.15
CLCN5-202ENST00000376088 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
CLCN5-202ENST00000376088 KMT2DO14686 5537 aa1.63□□□□□ -2.15
CLCN5-202ENST00000376088 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
CLCN5-202ENST00000376088 PRM1P04553 51 aa1.62□□□□□ -2.15
CLCN5-202ENST00000376088 LCE2CQ5TA81 110 aa1.62□□□□□ -2.15
CLCN5-202ENST00000376088 MT1MQ8N339 61 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms