RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
MSH5-204ENST00000375755 P0C880 135 aa7.03□□□□□ -1.28
MSH5-204ENST00000375755 FAT3Q8TDW7 4589 aa7.02□□□□□ -1.29
MSH5-204ENST00000375755 A0A1B0GU33 70 aa7.02□□□□□ -1.29
MSH5-204ENST00000375755 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
MSH5-204ENST00000375755 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
MSH5-204ENST00000375755 Q5VSD8 79 aa6.95□□□□□ -1.3
MSH5-204ENST00000375755 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
MSH5-204ENST00000375755 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
MSH5-204ENST00000375755 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
MSH5-204ENST00000375755 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
MSH5-204ENST00000375755 K7ERS5 55 aa6.85□□□□□ -1.31
MSH5-204ENST00000375755 RPS29P62273 56 aaKnown RBP6.84□□□□□ -1.31
MSH5-204ENST00000375755 ABCA13Q86UQ4 5058 aa6.82□□□□□ -1.32
MSH5-204ENST00000375755 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
MSH5-204ENST00000375755 BIRC6Q9NR09 4857 aa6.8□□□□□ -1.32
MSH5-204ENST00000375755 C20orf166-AS1Q96NR2 134 aa6.8□□□□□ -1.32
MSH5-204ENST00000375755 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
MSH5-204ENST00000375755 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.33
MSH5-204ENST00000375755 A0A0D9SG42 100 aa6.77□□□□□ -1.33
MSH5-204ENST00000375755 LPAP08519 4548 aa6.74□□□□□ -1.33
MSH5-204ENST00000375755 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
MSH5-204ENST00000375755 HERC2O95714 4834 aa6.73□□□□□ -1.33
MSH5-204ENST00000375755 MT1HL1P0DM35 61 aa6.73□□□□□ -1.33
MSH5-204ENST00000375755 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.33
MSH5-204ENST00000375755 KRTAP13-4Q3LI77 160 aa6.7□□□□□ -1.34
MSH5-204ENST00000375755 KRTAP10-6P60371 365 aaPredicted RBP6.69□□□□□ -1.34
MSH5-204ENST00000375755 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
MSH5-204ENST00000375755 LRP2P98164 4655 aa6.68□□□□□ -1.34
MSH5-204ENST00000375755 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
MSH5-204ENST00000375755 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
MSH5-204ENST00000375755 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
MSH5-204ENST00000375755 XP32Q5T750 250 aa6.57□□□□□ -1.36
MSH5-204ENST00000375755 S4R3F8 94 aa6.52□□□□□ -1.37
MSH5-204ENST00000375755 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
MSH5-204ENST00000375755 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
MSH5-204ENST00000375755 HERC1Q15751 4861 aa6.45□□□□□ -1.38
MSH5-204ENST00000375755 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
MSH5-204ENST00000375755 MUC2Q02817 5179 aa6.38□□□□□ -1.39
MSH5-204ENST00000375755 J3QL48 77 aa6.37□□□□□ -1.39
MSH5-204ENST00000375755 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
MSH5-204ENST00000375755 MUC17Q685J3 4493 aa6.37□□□□□ -1.39
MSH5-204ENST00000375755 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
MSH5-204ENST00000375755 KRTAP4-1Q9BYQ7 146 aa6.24□□□□□ -1.41
MSH5-204ENST00000375755 M0QZ58 72 aa6.22□□□□□ -1.41
MSH5-204ENST00000375755 SEC61BP60468 96 aaKnown RBP6.12□□□□□ -1.43
MSH5-204ENST00000375755 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
MSH5-204ENST00000375755 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
MSH5-204ENST00000375755 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
MSH5-204ENST00000375755 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
MSH5-204ENST00000375755 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
MSH5-204ENST00000375755 R4GN34 69 aa6.02□□□□□ -1.45
MSH5-204ENST00000375755 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
MSH5-204ENST00000375755 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
MSH5-204ENST00000375755 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
MSH5-204ENST00000375755 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
MSH5-204ENST00000375755 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
MSH5-204ENST00000375755 MT1HP80294 61 aa5.66□□□□□ -1.5
MSH5-204ENST00000375755 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
MSH5-204ENST00000375755 M0R2T5 61 aa5.63□□□□□ -1.51
MSH5-204ENST00000375755 TNP1P09430 55 aa5.58□□□□□ -1.52
MSH5-204ENST00000375755 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
MSH5-204ENST00000375755 MT1FP04733 61 aa5.5□□□□□ -1.53
MSH5-204ENST00000375755 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
MSH5-204ENST00000375755 MT2AP02795 61 aa5.48□□□□□ -1.53
MSH5-204ENST00000375755 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
MSH5-204ENST00000375755 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
MSH5-204ENST00000375755 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
MSH5-204ENST00000375755 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
MSH5-204ENST00000375755 SPRR2GQ9BYE4 73 aa5.39□□□□□ -1.55
MSH5-204ENST00000375755 USH2AO75445 5202 aa5.31□□□□□ -1.56
MSH5-204ENST00000375755 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
MSH5-204ENST00000375755 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
MSH5-204ENST00000375755 MT1BP07438 61 aa5.22□□□□□ -1.57
MSH5-204ENST00000375755 INE1O15225 51 aa5.2□□□□□ -1.58
MSH5-204ENST00000375755 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
MSH5-204ENST00000375755 LCE2BO14633 110 aa5.15□□□□□ -1.59
MSH5-204ENST00000375755 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
MSH5-204ENST00000375755 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
MSH5-204ENST00000375755 MT1XP80297 61 aa5.1□□□□□ -1.59
MSH5-204ENST00000375755 KMT2DO14686 5537 aa5.07□□□□□ -1.6
MSH5-204ENST00000375755 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
MSH5-204ENST00000375755 KRTAP12-3P60328 96 aa5□□□□□ -1.61
MSH5-204ENST00000375755 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
MSH5-204ENST00000375755 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
MSH5-204ENST00000375755 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
MSH5-204ENST00000375755 SSPOA2VEC9 5147 aa4.96□□□□□ -1.61
MSH5-204ENST00000375755 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
MSH5-204ENST00000375755 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
MSH5-204ENST00000375755 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
MSH5-204ENST00000375755 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
MSH5-204ENST00000375755 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
MSH5-204ENST00000375755 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
MSH5-204ENST00000375755 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
MSH5-204ENST00000375755 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
MSH5-204ENST00000375755 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
MSH5-204ENST00000375755 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
MSH5-204ENST00000375755 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
MSH5-204ENST00000375755 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
MSH5-204ENST00000375755 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms