RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 A8MUU9 505 aa8.08□□□□□ -1.12
MSH5-203ENST00000375750 A0A1B0GU33 70 aa8.08□□□□□ -1.12
MSH5-203ENST00000375750 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
MSH5-203ENST00000375750 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
MSH5-203ENST00000375750 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
MSH5-203ENST00000375750 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
MSH5-203ENST00000375750 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
MSH5-203ENST00000375750 KRTAP4-5Q9BYR2 181 aa7.96□□□□□ -1.13
MSH5-203ENST00000375750 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
MSH5-203ENST00000375750 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
MSH5-203ENST00000375750 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
MSH5-203ENST00000375750 H3BS24 57 aa7.86□□□□□ -1.15
MSH5-203ENST00000375750 A0A0D9SG42 100 aa7.83□□□□□ -1.16
MSH5-203ENST00000375750 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
MSH5-203ENST00000375750 ABCA13Q86UQ4 5058 aa7.82□□□□□ -1.16
MSH5-203ENST00000375750 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
MSH5-203ENST00000375750 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
MSH5-203ENST00000375750 BIRC6Q9NR09 4857 aa7.76□□□□□ -1.17
MSH5-203ENST00000375750 K7ERS5 55 aa7.76□□□□□ -1.17
MSH5-203ENST00000375750 HERC2O95714 4834 aa7.75□□□□□ -1.17
MSH5-203ENST00000375750 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
MSH5-203ENST00000375750 XP32Q5T750 250 aa7.73□□□□□ -1.17
MSH5-203ENST00000375750 ROMO1P60602 79 aa7.73□□□□□ -1.17
MSH5-203ENST00000375750 LPAP08519 4548 aa7.71□□□□□ -1.18
MSH5-203ENST00000375750 P0C880 135 aa7.7□□□□□ -1.18
MSH5-203ENST00000375750 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
MSH5-203ENST00000375750 LRP2P98164 4655 aa7.66□□□□□ -1.18
MSH5-203ENST00000375750 C10orf95Q9H7T3 257 aa7.65□□□□□ -1.18
MSH5-203ENST00000375750 S4R3F8 94 aa7.65□□□□□ -1.18
MSH5-203ENST00000375750 TPRXLQ17RH7 258 aa7.64□□□□□ -1.19
MSH5-203ENST00000375750 J3QL48 77 aa7.63□□□□□ -1.19
MSH5-203ENST00000375750 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
MSH5-203ENST00000375750 PCLOQ9Y6V0 5065 aa7.52□□□□□ -1.21
MSH5-203ENST00000375750 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
MSH5-203ENST00000375750 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
MSH5-203ENST00000375750 HERC1Q15751 4861 aa7.43□□□□□ -1.22
MSH5-203ENST00000375750 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
MSH5-203ENST00000375750 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
MSH5-203ENST00000375750 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
MSH5-203ENST00000375750 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
MSH5-203ENST00000375750 MUC2Q02817 5179 aa7.29□□□□□ -1.24
MSH5-203ENST00000375750 HMCN2Q8NDA2 5059 aa7.27□□□□□ -1.24
MSH5-203ENST00000375750 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
MSH5-203ENST00000375750 M0QZ58 72 aa7.22□□□□□ -1.25
MSH5-203ENST00000375750 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
MSH5-203ENST00000375750 R4GN34 69 aa7.14□□□□□ -1.27
MSH5-203ENST00000375750 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
MSH5-203ENST00000375750 UBR4Q5T4S7 5183 aa7.02□□□□□ -1.29
MSH5-203ENST00000375750 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
MSH5-203ENST00000375750 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
MSH5-203ENST00000375750 FLGP20930 4061 aaPredicted RBP6.93□□□□□ -1.3
MSH5-203ENST00000375750 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
MSH5-203ENST00000375750 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
MSH5-203ENST00000375750 CAMK2N1Q7Z7J9 78 aa6.81□□□□□ -1.32
MSH5-203ENST00000375750 MT1HP80294 61 aa6.69□□□□□ -1.34
MSH5-203ENST00000375750 M0R2T5 61 aa6.67□□□□□ -1.34
MSH5-203ENST00000375750 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
MSH5-203ENST00000375750 A0A0A0MQY5 61 aa6.56□□□□□ -1.36
MSH5-203ENST00000375750 LUZP6Q538Z0 58 aa6.54□□□□□ -1.36
MSH5-203ENST00000375750 TNP1P09430 55 aa6.51□□□□□ -1.37
MSH5-203ENST00000375750 KRTAP9-8Q9BYQ0 159 aa6.47□□□□□ -1.37
MSH5-203ENST00000375750 MT2AP02795 61 aa6.46□□□□□ -1.38
MSH5-203ENST00000375750 MT1FP04733 61 aa6.45□□□□□ -1.38
MSH5-203ENST00000375750 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
MSH5-203ENST00000375750 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
MSH5-203ENST00000375750 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
MSH5-203ENST00000375750 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
MSH5-203ENST00000375750 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
MSH5-203ENST00000375750 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
MSH5-203ENST00000375750 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
MSH5-203ENST00000375750 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
MSH5-203ENST00000375750 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
MSH5-203ENST00000375750 MT1BP07438 61 aa6.12□□□□□ -1.43
MSH5-203ENST00000375750 LCE2BO14633 110 aa6.06□□□□□ -1.44
MSH5-203ENST00000375750 USH2AO75445 5202 aa6.05□□□□□ -1.44
MSH5-203ENST00000375750 KRTAP10-5P60370 271 aa6□□□□□ -1.45
MSH5-203ENST00000375750 MT1XP80297 61 aa5.98□□□□□ -1.45
MSH5-203ENST00000375750 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
MSH5-203ENST00000375750 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
MSH5-203ENST00000375750 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
MSH5-203ENST00000375750 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
MSH5-203ENST00000375750 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
MSH5-203ENST00000375750 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
MSH5-203ENST00000375750 KMT2DO14686 5537 aa5.77□□□□□ -1.49
MSH5-203ENST00000375750 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
MSH5-203ENST00000375750 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
MSH5-203ENST00000375750 INE1O15225 51 aa5.59□□□□□ -1.52
MSH5-203ENST00000375750 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
MSH5-203ENST00000375750 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
MSH5-203ENST00000375750 LCE2DQ5TA82 110 aaPredicted RBP5.55□□□□□ -1.52
MSH5-203ENST00000375750 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
MSH5-203ENST00000375750 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
MSH5-203ENST00000375750 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
MSH5-203ENST00000375750 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.53
MSH5-203ENST00000375750 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
MSH5-203ENST00000375750 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.55
MSH5-203ENST00000375750 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
MSH5-203ENST00000375750 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
MSH5-203ENST00000375750 MT1EP04732 61 aa5.21□□□□□ -1.58
MSH5-203ENST00000375750 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms