RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 ABCA13Q86UQ4 5058 aa13.48□□□□□ -0.25
CUL4A-202ENST00000375440 SPATA8Q6RVD6 105 aa13.47□□□□□ -0.25
CUL4A-202ENST00000375440 LRP2P98164 4655 aa13.44□□□□□ -0.26
CUL4A-202ENST00000375440 MIR22HGQ0VDD5 57 aa13.42□□□□□ -0.26
CUL4A-202ENST00000375440 A6NN06 94 aa13.37□□□□□ -0.27
CUL4A-202ENST00000375440 LPAP08519 4548 aa13.35□□□□□ -0.27
CUL4A-202ENST00000375440 KRTAP3-3Q9BYR6 98 aa13.35□□□□□ -0.27
CUL4A-202ENST00000375440 S4R3F8 94 aa13.24□□□□□ -0.29
CUL4A-202ENST00000375440 HERC2O95714 4834 aa13.24□□□□□ -0.29
CUL4A-202ENST00000375440 A0A1B0GU33 70 aa13.21□□□□□ -0.29
CUL4A-202ENST00000375440 J3QL48 77 aa13.2□□□□□ -0.3
CUL4A-202ENST00000375440 H1FX-AS1Q4G0G2 97 aa13.19□□□□□ -0.3
CUL4A-202ENST00000375440 H0YAA0 97 aa13.18□□□□□ -0.3
CUL4A-202ENST00000375440 BIRC6Q9NR09 4857 aa13.15□□□□□ -0.3
CUL4A-202ENST00000375440 KTN1-AS1Q86SY8 53 aa13.11□□□□□ -0.31
CUL4A-202ENST00000375440 RBM12B-AS1Q9P1G2 102 aa13.08□□□□□ -0.32
CUL4A-202ENST00000375440 KRTAP10-6P60371 365 aaPredicted RBP13.06□□□□□ -0.32
CUL4A-202ENST00000375440 SEC61BP60468 96 aaKnown RBP13.02□□□□□ -0.32
CUL4A-202ENST00000375440 KRTAP3-2Q9BYR7 98 aa13.02□□□□□ -0.32
CUL4A-202ENST00000375440 KRTAP4-1Q9BYQ7 146 aa12.89□□□□□ -0.35
CUL4A-202ENST00000375440 MUC17Q685J3 4493 aa12.89□□□□□ -0.35
CUL4A-202ENST00000375440 P0C880 135 aa12.87□□□□□ -0.35
CUL4A-202ENST00000375440 CSAG1Q6PB30 78 aa12.85□□□□□ -0.35
CUL4A-202ENST00000375440 KRTAP13-4Q3LI77 160 aa12.84□□□□□ -0.35
CUL4A-202ENST00000375440 ADM2Q7Z4H4 148 aa12.79□□□□□ -0.36
CUL4A-202ENST00000375440 PCLOQ9Y6V0 5065 aa12.7□□□□□ -0.38
CUL4A-202ENST00000375440 PRAC1Q96KF2 57 aa12.67□□□□□ -0.38
CUL4A-202ENST00000375440 KRTAP19-2Q3LHN2 52 aa12.64□□□□□ -0.39
CUL4A-202ENST00000375440 A0A0D9SG42 100 aa12.62□□□□□ -0.39
CUL4A-202ENST00000375440 HERC1Q15751 4861 aa12.6□□□□□ -0.39
CUL4A-202ENST00000375440 K7ERS5 55 aa12.59□□□□□ -0.39
CUL4A-202ENST00000375440 HMCN2Q8NDA2 5059 aa12.49□□□□□ -0.41
CUL4A-202ENST00000375440 MUC2Q02817 5179 aa12.46□□□□□ -0.41
CUL4A-202ENST00000375440 M0QZ58 72 aa12.45□□□□□ -0.42
CUL4A-202ENST00000375440 KRTAP12-2P59991 146 aa12.36□□□□□ -0.43
CUL4A-202ENST00000375440 KRTAP12-1P59990 96 aa12.33□□□□□ -0.44
CUL4A-202ENST00000375440 FLGP20930 4061 aaPredicted RBP12.29□□□□□ -0.44
CUL4A-202ENST00000375440 ROMO1P60602 79 aa12.26□□□□□ -0.45
CUL4A-202ENST00000375440 LORP23490 312 aaPredicted RBP12.25□□□□□ -0.45
CUL4A-202ENST00000375440 R4GN34 69 aa12.25□□□□□ -0.45
CUL4A-202ENST00000375440 SPINT4Q6UDR6 99 aa12.23□□□□□ -0.45
CUL4A-202ENST00000375440 KRTAP25-1Q3LHN0 102 aa12.13□□□□□ -0.47
CUL4A-202ENST00000375440 LINC01554Q52M75 96 aa12.13□□□□□ -0.47
CUL4A-202ENST00000375440 CRIPTQ9P021 101 aa12.1□□□□□ -0.47
CUL4A-202ENST00000375440 LCE2CQ5TA81 110 aa12.07□□□□□ -0.48
CUL4A-202ENST00000375440 UBR4Q5T4S7 5183 aa11.92□□□□□ -0.5
CUL4A-202ENST00000375440 RNF213Q63HN8 5207 aa11.91□□□□□ -0.5
CUL4A-202ENST00000375440 FAT4Q6V0I7 4981 aa11.9□□□□□ -0.51
CUL4A-202ENST00000375440 C10orf95Q9H7T3 257 aa11.79□□□□□ -0.52
CUL4A-202ENST00000375440 MT1HP80294 61 aa11.75□□□□□ -0.53
CUL4A-202ENST00000375440 M0R2T5 61 aa11.66□□□□□ -0.54
CUL4A-202ENST00000375440 CAMK2N1Q7Z7J9 78 aa11.54□□□□□ -0.56
CUL4A-202ENST00000375440 SPRR2GQ9BYE4 73 aa11.5□□□□□ -0.57
CUL4A-202ENST00000375440 KRTAP19-1Q8IUB9 90 aa11.47□□□□□ -0.57
CUL4A-202ENST00000375440 MT2AP02795 61 aa11.45□□□□□ -0.58
CUL4A-202ENST00000375440 KRTAP9-8Q9BYQ0 159 aa11.43□□□□□ -0.58
CUL4A-202ENST00000375440 MT1FP04733 61 aa11.42□□□□□ -0.58
CUL4A-202ENST00000375440 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
CUL4A-202ENST00000375440 PLAC4Q8WY50 150 aa11.21□□□□□ -0.62
CUL4A-202ENST00000375440 KRTAP19-8Q3LI54 63 aa11.09□□□□□ -0.63
CUL4A-202ENST00000375440 TNP1P09430 55 aa11.06□□□□□ -0.64
CUL4A-202ENST00000375440 PP632Q6XCG6 107 aa11.05□□□□□ -0.64
CUL4A-202ENST00000375440 KRTAP9-3Q9BYQ3 159 aa10.98□□□□□ -0.65
CUL4A-202ENST00000375440 MT1BP07438 61 aa10.95□□□□□ -0.66
CUL4A-202ENST00000375440 KRTAP15-1Q3LI76 137 aa10.95□□□□□ -0.66
CUL4A-202ENST00000375440 KRTAP23-1A1A580 65 aa10.87□□□□□ -0.67
CUL4A-202ENST00000375440 LCE2AQ5TA79 106 aaPredicted RBP10.81□□□□□ -0.68
CUL4A-202ENST00000375440 KRTAP10-5P60370 271 aa10.75□□□□□ -0.69
CUL4A-202ENST00000375440 MT1XP80297 61 aa10.74□□□□□ -0.69
CUL4A-202ENST00000375440 LCE2BO14633 110 aa10.6□□□□□ -0.71
CUL4A-202ENST00000375440 LCE3AQ5TA76 89 aa10.58□□□□□ -0.72
CUL4A-202ENST00000375440 NDUFAF8A1L188 74 aa10.4□□□□□ -0.74
CUL4A-202ENST00000375440 PRO2289Q9P1D8 64 aa10.4□□□□□ -0.74
CUL4A-202ENST00000375440 KRTAP10-7P60409 375 aaPredicted RBP10.38□□□□□ -0.75
CUL4A-202ENST00000375440 KRTAP10-12P60413 245 aa10.34□□□□□ -0.75
CUL4A-202ENST00000375440 KRTAP8-1Q8IUC2 63 aa10.34□□□□□ -0.75
CUL4A-202ENST00000375440 USH2AO75445 5202 aa10.29□□□□□ -0.76
CUL4A-202ENST00000375440 H3BS24 57 aa10.17□□□□□ -0.78
CUL4A-202ENST00000375440 SPRR5A0A1B0GTR4 108 aa10.16□□□□□ -0.78
CUL4A-202ENST00000375440 KRTAP12-3P60328 96 aa10.1□□□□□ -0.79
CUL4A-202ENST00000375440 LUZP6Q538Z0 58 aa10.04□□□□□ -0.8
CUL4A-202ENST00000375440 A0A0A0MQY5 61 aa9.99□□□□□ -0.81
CUL4A-202ENST00000375440 KRTAP19-5Q3LI72 72 aa9.86□□□□□ -0.83
CUL4A-202ENST00000375440 SSPOA2VEC9 5147 aa9.85□□□□□ -0.83
CUL4A-202ENST00000375440 KRTAP4-8A0A0G2JLE6 195 aa9.85□□□□□ -0.83
CUL4A-202ENST00000375440 KRTAP4-8Q9BYQ9 185 aa9.85□□□□□ -0.83
CUL4A-202ENST00000375440 KMT2DO14686 5537 aa9.85□□□□□ -0.83
CUL4A-202ENST00000375440 KRTAP19-6Q3LI70 58 aa9.71□□□□□ -0.86
CUL4A-202ENST00000375440 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
CUL4A-202ENST00000375440 KRTAP19-7Q3SYF9 63 aa9.59□□□□□ -0.87
CUL4A-202ENST00000375440 LCE3CQ5T5A8 94 aa9.49□□□□□ -0.89
CUL4A-202ENST00000375440 LCE2DQ5TA82 110 aaPredicted RBP9.49□□□□□ -0.89
CUL4A-202ENST00000375440 MT1EP04732 61 aa9.34□□□□□ -0.91
CUL4A-202ENST00000375440 MT1LQ93083 61 aa9.26□□□□□ -0.93
CUL4A-202ENST00000375440 FCGBPQ9Y6R7 5405 aaPredicted RBP9.26□□□□□ -0.93
CUL4A-202ENST00000375440 KRTAP4-7Q9BYR0 210 aa9.18□□□□□ -0.94
CUL4A-202ENST00000375440 KRTAP19-4Q3LI73 84 aa9.17□□□□□ -0.94
CUL4A-202ENST00000375440 KRTAP9-6A8MVA2 160 aa9.12□□□□□ -0.95
CUL4A-202ENST00000375440 MUC12Q9UKN1 5478 aa8.89□□□□□ -0.99
CUL4A-202ENST00000375440 KRTAP9-2Q9BYQ4 174 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms