RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 H0YAA0 97 aa9.1□□□□□ -0.95
PHF1-202ENST00000374516 A8MUU9 505 aa9.05□□□□□ -0.96
PHF1-202ENST00000374516 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
PHF1-202ENST00000374516 KRTAP3-1Q9BYR8 98 aa9.03□□□□□ -0.96
PHF1-202ENST00000374516 A0A1B0GU33 70 aa9.02□□□□□ -0.97
PHF1-202ENST00000374516 MT1HL1P0DM35 61 aa8.98□□□□□ -0.97
PHF1-202ENST00000374516 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.97
PHF1-202ENST00000374516 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
PHF1-202ENST00000374516 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
PHF1-202ENST00000374516 ABCA13Q86UQ4 5058 aa8.84□□□□□ -0.99
PHF1-202ENST00000374516 H3BS24 57 aa8.83□□□□□ -1
PHF1-202ENST00000374516 XP32Q5T750 250 aa8.83□□□□□ -1
PHF1-202ENST00000374516 COX6B2Q6YFQ2 88 aa8.8□□□□□ -1
PHF1-202ENST00000374516 BIRC6Q9NR09 4857 aa8.79□□□□□ -1
PHF1-202ENST00000374516 K7ERS5 55 aa8.79□□□□□ -1
PHF1-202ENST00000374516 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
PHF1-202ENST00000374516 ROMO1P60602 79 aa8.76□□□□□ -1.01
PHF1-202ENST00000374516 CRIPTQ9P021 101 aa8.74□□□□□ -1.01
PHF1-202ENST00000374516 LRP2P98164 4655 aa8.73□□□□□ -1.01
PHF1-202ENST00000374516 LPAP08519 4548 aa8.72□□□□□ -1.01
PHF1-202ENST00000374516 HERC2O95714 4834 aa8.7□□□□□ -1.02
PHF1-202ENST00000374516 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
PHF1-202ENST00000374516 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
PHF1-202ENST00000374516 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
PHF1-202ENST00000374516 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
PHF1-202ENST00000374516 J3QL48 77 aa8.58□□□□□ -1.04
PHF1-202ENST00000374516 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
PHF1-202ENST00000374516 A0A0D9SG42 100 aa8.54□□□□□ -1.04
PHF1-202ENST00000374516 P0C880 135 aa8.5□□□□□ -1.05
PHF1-202ENST00000374516 S4R3F8 94 aa8.46□□□□□ -1.05
PHF1-202ENST00000374516 PCLOQ9Y6V0 5065 aa8.42□□□□□ -1.06
PHF1-202ENST00000374516 SPINT4Q6UDR6 99 aa8.37□□□□□ -1.07
PHF1-202ENST00000374516 C10orf95Q9H7T3 257 aa8.37□□□□□ -1.07
PHF1-202ENST00000374516 HERC1Q15751 4861 aa8.36□□□□□ -1.07
PHF1-202ENST00000374516 KRTAP12-2P59991 146 aa8.34□□□□□ -1.08
PHF1-202ENST00000374516 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
PHF1-202ENST00000374516 MUC17Q685J3 4493 aa8.28□□□□□ -1.08
PHF1-202ENST00000374516 MUC2Q02817 5179 aa8.27□□□□□ -1.09
PHF1-202ENST00000374516 KRTAP4-1Q9BYQ7 146 aa8.26□□□□□ -1.09
PHF1-202ENST00000374516 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
PHF1-202ENST00000374516 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
PHF1-202ENST00000374516 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
PHF1-202ENST00000374516 M0QZ58 72 aa8.14□□□□□ -1.11
PHF1-202ENST00000374516 NDUFAF8A1L188 74 aa8.11□□□□□ -1.11
PHF1-202ENST00000374516 KRTAP19-2Q3LHN2 52 aa8.02□□□□□ -1.13
PHF1-202ENST00000374516 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
PHF1-202ENST00000374516 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
PHF1-202ENST00000374516 FLGP20930 4061 aaPredicted RBP7.89□□□□□ -1.15
PHF1-202ENST00000374516 R4GN34 69 aa7.88□□□□□ -1.15
PHF1-202ENST00000374516 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
PHF1-202ENST00000374516 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
PHF1-202ENST00000374516 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
PHF1-202ENST00000374516 LCE2CQ5TA81 110 aa7.73□□□□□ -1.17
PHF1-202ENST00000374516 M0R2T5 61 aa7.57□□□□□ -1.2
PHF1-202ENST00000374516 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
PHF1-202ENST00000374516 MT1HP80294 61 aa7.54□□□□□ -1.2
PHF1-202ENST00000374516 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
PHF1-202ENST00000374516 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
PHF1-202ENST00000374516 MT2AP02795 61 aa7.32□□□□□ -1.24
PHF1-202ENST00000374516 MT1FP04733 61 aa7.32□□□□□ -1.24
PHF1-202ENST00000374516 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
PHF1-202ENST00000374516 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
PHF1-202ENST00000374516 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
PHF1-202ENST00000374516 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
PHF1-202ENST00000374516 TNP1P09430 55 aa7.27□□□□□ -1.25
PHF1-202ENST00000374516 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
PHF1-202ENST00000374516 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
PHF1-202ENST00000374516 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
PHF1-202ENST00000374516 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
PHF1-202ENST00000374516 KRTAP9-3Q9BYQ3 159 aa7.02□□□□□ -1.29
PHF1-202ENST00000374516 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
PHF1-202ENST00000374516 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
PHF1-202ENST00000374516 MT1BP07438 61 aa6.97□□□□□ -1.29
PHF1-202ENST00000374516 USH2AO75445 5202 aa6.86□□□□□ -1.31
PHF1-202ENST00000374516 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
PHF1-202ENST00000374516 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
PHF1-202ENST00000374516 MT1XP80297 61 aa6.83□□□□□ -1.32
PHF1-202ENST00000374516 LCE2BO14633 110 aa6.82□□□□□ -1.32
PHF1-202ENST00000374516 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
PHF1-202ENST00000374516 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
PHF1-202ENST00000374516 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
PHF1-202ENST00000374516 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
PHF1-202ENST00000374516 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
PHF1-202ENST00000374516 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
PHF1-202ENST00000374516 KMT2DO14686 5537 aa6.51□□□□□ -1.37
PHF1-202ENST00000374516 INE1O15225 51 aa6.5□□□□□ -1.37
PHF1-202ENST00000374516 SSPOA2VEC9 5147 aa6.45□□□□□ -1.38
PHF1-202ENST00000374516 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
PHF1-202ENST00000374516 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
PHF1-202ENST00000374516 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
PHF1-202ENST00000374516 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
PHF1-202ENST00000374516 KRTAP19-6Q3LI70 58 aa6.21□□□□□ -1.41
PHF1-202ENST00000374516 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
PHF1-202ENST00000374516 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
PHF1-202ENST00000374516 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
PHF1-202ENST00000374516 KRTAP19-7Q3SYF9 63 aa6.09□□□□□ -1.43
PHF1-202ENST00000374516 KRTAP9-6A0A140TA67 174 aa5.98□□□□□ -1.45
PHF1-202ENST00000374516 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
PHF1-202ENST00000374516 MT1EP04732 61 aa5.93□□□□□ -1.46
PHF1-202ENST00000374516 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms