RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 K7ERS5 55 aa9.36□□□□□ -0.91
PHF1-201ENST00000374512 FAT3Q8TDW7 4589 aa9.34□□□□□ -0.91
PHF1-201ENST00000374512 LRP1Q07954 4544 aaKnown RBP9.34□□□□□ -0.91
PHF1-201ENST00000374512 RPL37P61927 97 aaKnown RBP9.29□□□□□ -0.92
PHF1-201ENST00000374512 KRTAP25-1Q3LHN0 102 aa9.27□□□□□ -0.93
PHF1-201ENST00000374512 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
PHF1-201ENST00000374512 EPPK1P58107 5090 aaKnown RBP9.24□□□□□ -0.93
PHF1-201ENST00000374512 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
PHF1-201ENST00000374512 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
PHF1-201ENST00000374512 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
PHF1-201ENST00000374512 XP32Q5T750 250 aa9.2□□□□□ -0.94
PHF1-201ENST00000374512 KIAA1109Q2LD37 5005 aa9.19□□□□□ -0.94
PHF1-201ENST00000374512 S4R3F8 94 aa9.16□□□□□ -0.94
PHF1-201ENST00000374512 MT1HL1P0DM35 61 aa9.16□□□□□ -0.94
PHF1-201ENST00000374512 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
PHF1-201ENST00000374512 ROMO1P60602 79 aa9.11□□□□□ -0.95
PHF1-201ENST00000374512 KRTAP13-4Q3LI77 160 aa9.05□□□□□ -0.96
PHF1-201ENST00000374512 MYCBP2O75592 4640 aa9.05□□□□□ -0.96
PHF1-201ENST00000374512 A0A0D9SG42 100 aa8.97□□□□□ -0.97
PHF1-201ENST00000374512 P0C880 135 aa8.95□□□□□ -0.98
PHF1-201ENST00000374512 CRIPTQ9P021 101 aa8.92□□□□□ -0.98
PHF1-201ENST00000374512 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
PHF1-201ENST00000374512 BIRC6Q9NR09 4857 aa8.87□□□□□ -0.99
PHF1-201ENST00000374512 KRTAP4-5Q9BYR2 181 aa8.86□□□□□ -0.99
PHF1-201ENST00000374512 M0QZ58 72 aa8.82□□□□□ -1
PHF1-201ENST00000374512 KRTAP12-2P59991 146 aa8.8□□□□□ -1
PHF1-201ENST00000374512 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
PHF1-201ENST00000374512 LRP2P98164 4655 aa8.76□□□□□ -1.01
PHF1-201ENST00000374512 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
PHF1-201ENST00000374512 HERC2O95714 4834 aa8.73□□□□□ -1.01
PHF1-201ENST00000374512 LPAP08519 4548 aa8.73□□□□□ -1.01
PHF1-201ENST00000374512 H3BS24 57 aa8.72□□□□□ -1.01
PHF1-201ENST00000374512 SPINT4Q6UDR6 99 aa8.7□□□□□ -1.02
PHF1-201ENST00000374512 J3QL48 77 aa8.64□□□□□ -1.03
PHF1-201ENST00000374512 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
PHF1-201ENST00000374512 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
PHF1-201ENST00000374512 R4GN34 69 aa8.5□□□□□ -1.05
PHF1-201ENST00000374512 PCLOQ9Y6V0 5065 aa8.47□□□□□ -1.05
PHF1-201ENST00000374512 KRTAP15-1Q3LI76 137 aa8.46□□□□□ -1.05
PHF1-201ENST00000374512 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
PHF1-201ENST00000374512 KRTAP4-1Q9BYQ7 146 aa8.4□□□□□ -1.06
PHF1-201ENST00000374512 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
PHF1-201ENST00000374512 KRTAP19-2Q3LHN2 52 aa8.26□□□□□ -1.09
PHF1-201ENST00000374512 HERC1Q15751 4861 aa8.26□□□□□ -1.09
PHF1-201ENST00000374512 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
PHF1-201ENST00000374512 PP632Q6XCG6 107 aa8.13□□□□□ -1.11
PHF1-201ENST00000374512 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
PHF1-201ENST00000374512 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
PHF1-201ENST00000374512 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
PHF1-201ENST00000374512 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
PHF1-201ENST00000374512 MUC2Q02817 5179 aa8.02□□□□□ -1.12
PHF1-201ENST00000374512 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
PHF1-201ENST00000374512 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
PHF1-201ENST00000374512 TNP1P09430 55 aa7.84□□□□□ -1.15
PHF1-201ENST00000374512 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
PHF1-201ENST00000374512 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
PHF1-201ENST00000374512 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
PHF1-201ENST00000374512 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
PHF1-201ENST00000374512 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
PHF1-201ENST00000374512 MT1HP80294 61 aa7.67□□□□□ -1.18
PHF1-201ENST00000374512 M0R2T5 61 aa7.66□□□□□ -1.18
PHF1-201ENST00000374512 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
PHF1-201ENST00000374512 SPRR5A0A1B0GTR4 108 aa7.56□□□□□ -1.2
PHF1-201ENST00000374512 MT2AP02795 61 aa7.48□□□□□ -1.21
PHF1-201ENST00000374512 MT1FP04733 61 aa7.46□□□□□ -1.22
PHF1-201ENST00000374512 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.22
PHF1-201ENST00000374512 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
PHF1-201ENST00000374512 A0A0A0MQY5 61 aa7.44□□□□□ -1.22
PHF1-201ENST00000374512 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
PHF1-201ENST00000374512 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
PHF1-201ENST00000374512 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
PHF1-201ENST00000374512 MT1BP07438 61 aa7.2□□□□□ -1.26
PHF1-201ENST00000374512 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
PHF1-201ENST00000374512 KRTAP10-5P60370 271 aa7.15□□□□□ -1.27
PHF1-201ENST00000374512 MT1XP80297 61 aa7.13□□□□□ -1.27
PHF1-201ENST00000374512 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
PHF1-201ENST00000374512 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
PHF1-201ENST00000374512 KRTAP12-3P60328 96 aa7.02□□□□□ -1.29
PHF1-201ENST00000374512 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
PHF1-201ENST00000374512 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
PHF1-201ENST00000374512 LCE2BO14633 110 aa6.89□□□□□ -1.31
PHF1-201ENST00000374512 INE1O15225 51 aa6.78□□□□□ -1.32
PHF1-201ENST00000374512 KRTAP19-5Q3LI72 72 aa6.65□□□□□ -1.35
PHF1-201ENST00000374512 LCE3CQ5T5A8 94 aa6.63□□□□□ -1.35
PHF1-201ENST00000374512 USH2AO75445 5202 aa6.63□□□□□ -1.35
PHF1-201ENST00000374512 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
PHF1-201ENST00000374512 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
PHF1-201ENST00000374512 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
PHF1-201ENST00000374512 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
PHF1-201ENST00000374512 KMT2DO14686 5537 aa6.43□□□□□ -1.38
PHF1-201ENST00000374512 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
PHF1-201ENST00000374512 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
PHF1-201ENST00000374512 KRTAP19-7Q3SYF9 63 aa6.35□□□□□ -1.39
PHF1-201ENST00000374512 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
PHF1-201ENST00000374512 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
PHF1-201ENST00000374512 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
PHF1-201ENST00000374512 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
PHF1-201ENST00000374512 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
PHF1-201ENST00000374512 KRTAP2-1Q9BYU5 128 aa6.23□□□□□ -1.41
PHF1-201ENST00000374512 MT1LQ93083 61 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms