RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
GARNL3-201ENST00000373386 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
GARNL3-201ENST00000373386 DYNC1H1Q14204 4646 aaKnown RBP4.41□□□□□ -1.7
GARNL3-201ENST00000373386 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
GARNL3-201ENST00000373386 Q8N1X5 172 aa4.39□□□□□ -1.71
GARNL3-201ENST00000373386 PKHD1L1Q86WI1 4243 aa4.39□□□□□ -1.71
GARNL3-201ENST00000373386 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
GARNL3-201ENST00000373386 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
GARNL3-201ENST00000373386 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
GARNL3-201ENST00000373386 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
GARNL3-201ENST00000373386 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
GARNL3-201ENST00000373386 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
GARNL3-201ENST00000373386 PLAC4Q8WY50 150 aa4.33□□□□□ -1.72
GARNL3-201ENST00000373386 FAT1Q14517 4588 aa4.32□□□□□ -1.72
GARNL3-201ENST00000373386 R4GN34 69 aa4.32□□□□□ -1.72
GARNL3-201ENST00000373386 HSPG2P98160 4391 aa4.29□□□□□ -1.72
GARNL3-201ENST00000373386 KIAA1109Q2LD37 5005 aa4.27□□□□□ -1.73
GARNL3-201ENST00000373386 RYR1P21817 5038 aa4.26□□□□□ -1.73
GARNL3-201ENST00000373386 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
GARNL3-201ENST00000373386 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
GARNL3-201ENST00000373386 KRTAP17-1Q9BYP8 105 aa4.23□□□□□ -1.73
GARNL3-201ENST00000373386 SMR3BP02814 79 aaPredicted RBP4.22□□□□□ -1.73
GARNL3-201ENST00000373386 KRTAP10-8P60410 259 aa4.2□□□□□ -1.74
GARNL3-201ENST00000373386 TNXBP22105 4242 aa4.2□□□□□ -1.74
GARNL3-201ENST00000373386 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
GARNL3-201ENST00000373386 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
GARNL3-201ENST00000373386 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
GARNL3-201ENST00000373386 XP32Q5T750 250 aa4.15□□□□□ -1.75
GARNL3-201ENST00000373386 INE1O15225 51 aa4.15□□□□□ -1.75
GARNL3-201ENST00000373386 MYCBP2O75592 4640 aa4.13□□□□□ -1.75
GARNL3-201ENST00000373386 HERC2O95714 4834 aa4.1□□□□□ -1.75
GARNL3-201ENST00000373386 Q5VSD8 79 aa4.1□□□□□ -1.75
GARNL3-201ENST00000373386 S4R3F8 94 aa4.1□□□□□ -1.75
GARNL3-201ENST00000373386 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
GARNL3-201ENST00000373386 A0A0D9SG42 100 aa4.09□□□□□ -1.75
GARNL3-201ENST00000373386 KRTAP4-5Q9BYR2 181 aa4.08□□□□□ -1.76
GARNL3-201ENST00000373386 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
GARNL3-201ENST00000373386 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
GARNL3-201ENST00000373386 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
GARNL3-201ENST00000373386 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
GARNL3-201ENST00000373386 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
GARNL3-201ENST00000373386 PCLOQ9Y6V0 5065 aa4.02□□□□□ -1.77
GARNL3-201ENST00000373386 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
GARNL3-201ENST00000373386 DMBT1Q9UGM3 2413 aaPredicted RBP3.95□□□□□ -1.78
GARNL3-201ENST00000373386 HERC1Q15751 4861 aa3.91□□□□□ -1.78
GARNL3-201ENST00000373386 M0QZ58 72 aa3.91□□□□□ -1.78
GARNL3-201ENST00000373386 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
GARNL3-201ENST00000373386 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
GARNL3-201ENST00000373386 LPAP08519 4548 aa3.88□□□□□ -1.79
GARNL3-201ENST00000373386 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
GARNL3-201ENST00000373386 LRP2P98164 4655 aa3.82□□□□□ -1.8
GARNL3-201ENST00000373386 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
GARNL3-201ENST00000373386 MUC17Q685J3 4493 aa3.79□□□□□ -1.8
GARNL3-201ENST00000373386 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
GARNL3-201ENST00000373386 MUC2Q02817 5179 aa3.69□□□□□ -1.82
GARNL3-201ENST00000373386 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
GARNL3-201ENST00000373386 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
GARNL3-201ENST00000373386 LCE2DQ5TA82 110 aaPredicted RBP3.64□□□□□ -1.83
GARNL3-201ENST00000373386 LORP23490 312 aaPredicted RBP3.64□□□□□ -1.83
GARNL3-201ENST00000373386 RNF213Q63HN8 5207 aa3.62□□□□□ -1.83
GARNL3-201ENST00000373386 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.83
GARNL3-201ENST00000373386 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
GARNL3-201ENST00000373386 TNP1P09430 55 aa3.48□□□□□ -1.85
GARNL3-201ENST00000373386 SPRR2GQ9BYE4 73 aa3.46□□□□□ -1.85
GARNL3-201ENST00000373386 LCE2CQ5TA81 110 aa3.46□□□□□ -1.86
GARNL3-201ENST00000373386 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
GARNL3-201ENST00000373386 KRTAP19-1Q8IUB9 90 aa3.37□□□□□ -1.87
GARNL3-201ENST00000373386 MT1HP80294 61 aa3.36□□□□□ -1.87
GARNL3-201ENST00000373386 KRTAP10-10P60014 251 aa3.33□□□□□ -1.88
GARNL3-201ENST00000373386 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
GARNL3-201ENST00000373386 MT2AP02795 61 aa3.3□□□□□ -1.88
GARNL3-201ENST00000373386 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
GARNL3-201ENST00000373386 M0R2T5 61 aa3.28□□□□□ -1.88
GARNL3-201ENST00000373386 MT1FP04733 61 aa3.28□□□□□ -1.88
GARNL3-201ENST00000373386 LCE3AQ5TA76 89 aa3.25□□□□□ -1.89
GARNL3-201ENST00000373386 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
GARNL3-201ENST00000373386 MT1BP07438 61 aa3.2□□□□□ -1.9
GARNL3-201ENST00000373386 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
GARNL3-201ENST00000373386 MT1XP80297 61 aa3.17□□□□□ -1.9
GARNL3-201ENST00000373386 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
GARNL3-201ENST00000373386 KRTAP9-3Q9BYQ3 159 aa3.17□□□□□ -1.9
GARNL3-201ENST00000373386 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
GARNL3-201ENST00000373386 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
GARNL3-201ENST00000373386 USH2AO75445 5202 aa3.08□□□□□ -1.92
GARNL3-201ENST00000373386 LCE2BO14633 110 aa3.06□□□□□ -1.92
GARNL3-201ENST00000373386 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
GARNL3-201ENST00000373386 KRTAP19-4Q3LI73 84 aa3.01□□□□□ -1.93
GARNL3-201ENST00000373386 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
GARNL3-201ENST00000373386 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
GARNL3-201ENST00000373386 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
GARNL3-201ENST00000373386 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
GARNL3-201ENST00000373386 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
GARNL3-201ENST00000373386 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
GARNL3-201ENST00000373386 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.95
GARNL3-201ENST00000373386 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
GARNL3-201ENST00000373386 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
GARNL3-201ENST00000373386 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
GARNL3-201ENST00000373386 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
GARNL3-201ENST00000373386 FCGBPQ9Y6R7 5405 aaPredicted RBP2.85□□□□□ -1.95
GARNL3-201ENST00000373386 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms