RNA–Protein interactions for RNA: ENST00000373220.7

CLSPN-203, Transcript of claspin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSPN, Length 3,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-203ENST00000373220 MIR22HGQ0VDD5 57 aa2.85□□□□□ -1.95
CLSPN-203ENST00000373220 CDC42SE1Q9NRR8 79 aa2.84□□□□□ -1.95
CLSPN-203ENST00000373220 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.96
CLSPN-203ENST00000373220 SPINK7P58062 85 aa2.83□□□□□ -1.96
CLSPN-203ENST00000373220 KIAA1109Q2LD37 5005 aa2.83□□□□□ -1.96
CLSPN-203ENST00000373220 PKHD1P08F94 4074 aa2.83□□□□□ -1.96
CLSPN-203ENST00000373220 A8MU10 97 aa2.82□□□□□ -1.96
CLSPN-203ENST00000373220 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
CLSPN-203ENST00000373220 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
CLSPN-203ENST00000373220 C20orf166-AS1Q96NR2 134 aa2.81□□□□□ -1.96
CLSPN-203ENST00000373220 A6NN06 94 aa2.8□□□□□ -1.96
CLSPN-203ENST00000373220 DMAC1Q96GE9 116 aa2.78□□□□□ -1.96
CLSPN-203ENST00000373220 LRP1BQ9NZR2 4599 aa2.78□□□□□ -1.96
CLSPN-203ENST00000373220 Q6ZSA8 131 aa2.77□□□□□ -1.97
CLSPN-203ENST00000373220 UBR4Q5T4S7 5183 aa2.77□□□□□ -1.97
CLSPN-203ENST00000373220 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
CLSPN-203ENST00000373220 R4GN34 69 aa2.76□□□□□ -1.97
CLSPN-203ENST00000373220 APOBP04114 4563 aaKnown RBP2.76□□□□□ -1.97
CLSPN-203ENST00000373220 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
CLSPN-203ENST00000373220 A0A0D9SG42 100 aa2.75□□□□□ -1.97
CLSPN-203ENST00000373220 CSAG1Q6PB30 78 aa2.75□□□□□ -1.97
CLSPN-203ENST00000373220 A0A1B0GU33 70 aa2.74□□□□□ -1.97
CLSPN-203ENST00000373220 ABCA13Q86UQ4 5058 aa2.74□□□□□ -1.97
CLSPN-203ENST00000373220 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
CLSPN-203ENST00000373220 LOC100996750A0A140TA64 210 aa2.73□□□□□ -1.97
CLSPN-203ENST00000373220 KRTAP1-4P0C5Y4 121 aa2.73□□□□□ -1.97
CLSPN-203ENST00000373220 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
CLSPN-203ENST00000373220 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
CLSPN-203ENST00000373220 TNXBP22105 4242 aa2.72□□□□□ -1.97
CLSPN-203ENST00000373220 HSPG2P98160 4391 aa2.71□□□□□ -1.98
CLSPN-203ENST00000373220 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
CLSPN-203ENST00000373220 SPATA8Q6RVD6 105 aa2.68□□□□□ -1.98
CLSPN-203ENST00000373220 CRIPTQ9P021 101 aa2.68□□□□□ -1.98
CLSPN-203ENST00000373220 COX6B2Q6YFQ2 88 aa2.68□□□□□ -1.98
CLSPN-203ENST00000373220 KRTAP9-7A8MTY7 169 aa2.67□□□□□ -1.98
CLSPN-203ENST00000373220 DYNC1H1Q14204 4646 aaKnown RBP2.66□□□□□ -1.98
CLSPN-203ENST00000373220 P0C880 135 aa2.66□□□□□ -1.98
CLSPN-203ENST00000373220 S4R3F8 94 aa2.66□□□□□ -1.98
CLSPN-203ENST00000373220 KRTAP10-4P60372 401 aaPredicted RBP2.65□□□□□ -1.98
CLSPN-203ENST00000373220 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.98
CLSPN-203ENST00000373220 FAT1Q14517 4588 aa2.62□□□□□ -1.99
CLSPN-203ENST00000373220 RPL37P61927 97 aaKnown RBP2.61□□□□□ -1.99
CLSPN-203ENST00000373220 HERC1Q15751 4861 aa2.61□□□□□ -1.99
CLSPN-203ENST00000373220 XP32Q5T750 250 aa2.6□□□□□ -1.99
CLSPN-203ENST00000373220 LRP1Q07954 4544 aaKnown RBP2.59□□□□□ -1.99
CLSPN-203ENST00000373220 H0YAA0 97 aa2.56□□□□□ -2
CLSPN-203ENST00000373220 M0QZ58 72 aa2.55□□□□□ -2
CLSPN-203ENST00000373220 KRTAP4-8Q9BYQ9 185 aa2.55□□□□□ -2
CLSPN-203ENST00000373220 PRO2289Q9P1D8 64 aa2.53□□□□□ -2
CLSPN-203ENST00000373220 KRTAP10-8P60410 259 aa2.52□□□□□ -2.01
CLSPN-203ENST00000373220 M0R2T5 61 aa2.52□□□□□ -2.01
CLSPN-203ENST00000373220 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.51□□□□□ -2.01
CLSPN-203ENST00000373220 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
CLSPN-203ENST00000373220 MT1HL1P0DM35 61 aa2.5□□□□□ -2.01
CLSPN-203ENST00000373220 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
CLSPN-203ENST00000373220 KRTAP9-4Q9BYQ2 154 aa2.5□□□□□ -2.01
CLSPN-203ENST00000373220 TPRXLQ17RH7 258 aa2.49□□□□□ -2.01
CLSPN-203ENST00000373220 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
CLSPN-203ENST00000373220 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
CLSPN-203ENST00000373220 KRTAP10-6P60371 365 aaPredicted RBP2.47□□□□□ -2.01
CLSPN-203ENST00000373220 LCE5AQ5TCM9 118 aa2.47□□□□□ -2.01
CLSPN-203ENST00000373220 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
CLSPN-203ENST00000373220 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.02
CLSPN-203ENST00000373220 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
CLSPN-203ENST00000373220 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
CLSPN-203ENST00000373220 MUC17Q685J3 4493 aa2.4□□□□□ -2.02
CLSPN-203ENST00000373220 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
CLSPN-203ENST00000373220 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.03
CLSPN-203ENST00000373220 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
CLSPN-203ENST00000373220 LPAP08519 4548 aa2.37□□□□□ -2.03
CLSPN-203ENST00000373220 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
CLSPN-203ENST00000373220 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
CLSPN-203ENST00000373220 MUC2Q02817 5179 aa2.36□□□□□ -2.03
CLSPN-203ENST00000373220 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
CLSPN-203ENST00000373220 LCE3BQ5TA77 95 aa2.34□□□□□ -2.03
CLSPN-203ENST00000373220 LRP2P98164 4655 aa2.33□□□□□ -2.04
CLSPN-203ENST00000373220 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
CLSPN-203ENST00000373220 TNP1P09430 55 aa2.32□□□□□ -2.04
CLSPN-203ENST00000373220 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
CLSPN-203ENST00000373220 KRTAP4-8A0A0G2JLE6 195 aa2.3□□□□□ -2.04
CLSPN-203ENST00000373220 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
CLSPN-203ENST00000373220 FSIP2Q5CZC0 6907 aa2.28□□□□□ -2.04
CLSPN-203ENST00000373220 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
CLSPN-203ENST00000373220 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
CLSPN-203ENST00000373220 MT3P25713 68 aa2.27□□□□□ -2.05
CLSPN-203ENST00000373220 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
CLSPN-203ENST00000373220 INE1O15225 51 aa2.24□□□□□ -2.05
CLSPN-203ENST00000373220 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
CLSPN-203ENST00000373220 KRTAP4-7Q9BYR0 210 aa2.23□□□□□ -2.05
CLSPN-203ENST00000373220 LCE3CQ5T5A8 94 aa2.23□□□□□ -2.05
CLSPN-203ENST00000373220 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
CLSPN-203ENST00000373220 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
CLSPN-203ENST00000373220 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
CLSPN-203ENST00000373220 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
CLSPN-203ENST00000373220 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
CLSPN-203ENST00000373220 MT1HP80294 61 aa2.18□□□□□ -2.06
CLSPN-203ENST00000373220 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
CLSPN-203ENST00000373220 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.06
CLSPN-203ENST00000373220 NEBP20929 6669 aa2.15□□□□□ -2.07
CLSPN-203ENST00000373220 LCE1AQ5T7P2 110 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms