RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 J3QL48 77 aa9.15□□□□□ -0.94
CTSA-204ENST00000372484 UQCR11O14957 56 aa9.15□□□□□ -0.94
CTSA-204ENST00000372484 LPAP08519 4548 aa9.11□□□□□ -0.95
CTSA-204ENST00000372484 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
CTSA-204ENST00000372484 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
CTSA-204ENST00000372484 SPATA8Q6RVD6 105 aa9.08□□□□□ -0.96
CTSA-204ENST00000372484 HERC2O95714 4834 aa9.06□□□□□ -0.96
CTSA-204ENST00000372484 S4R3F8 94 aa9.04□□□□□ -0.96
CTSA-204ENST00000372484 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
CTSA-204ENST00000372484 BIRC6Q9NR09 4857 aa9.01□□□□□ -0.97
CTSA-204ENST00000372484 H1FX-AS1Q4G0G2 97 aa9.01□□□□□ -0.97
CTSA-204ENST00000372484 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
CTSA-204ENST00000372484 A0A1B0GU33 70 aa8.97□□□□□ -0.97
CTSA-204ENST00000372484 SEC61BP60468 96 aaKnown RBP8.96□□□□□ -0.97
CTSA-204ENST00000372484 A6NN06 94 aa8.96□□□□□ -0.98
CTSA-204ENST00000372484 H0YAA0 97 aa8.9□□□□□ -0.98
CTSA-204ENST00000372484 KRTAP10-6P60371 365 aaPredicted RBP8.83□□□□□ -1
CTSA-204ENST00000372484 KTN1-AS1Q86SY8 53 aa8.81□□□□□ -1
CTSA-204ENST00000372484 KRTAP3-2Q9BYR7 98 aa8.81□□□□□ -1
CTSA-204ENST00000372484 CSAG1Q6PB30 78 aa8.78□□□□□ -1
CTSA-204ENST00000372484 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
CTSA-204ENST00000372484 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
CTSA-204ENST00000372484 P0C880 135 aa8.73□□□□□ -1.01
CTSA-204ENST00000372484 PCLOQ9Y6V0 5065 aa8.72□□□□□ -1.01
CTSA-204ENST00000372484 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
CTSA-204ENST00000372484 KRTAP13-4Q3LI77 160 aa8.67□□□□□ -1.02
CTSA-204ENST00000372484 HERC1Q15751 4861 aa8.64□□□□□ -1.03
CTSA-204ENST00000372484 K7ERS5 55 aa8.59□□□□□ -1.03
CTSA-204ENST00000372484 A0A0D9SG42 100 aa8.59□□□□□ -1.03
CTSA-204ENST00000372484 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
CTSA-204ENST00000372484 MUC2Q02817 5179 aa8.54□□□□□ -1.04
CTSA-204ENST00000372484 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.05
CTSA-204ENST00000372484 PRAC1Q96KF2 57 aa8.51□□□□□ -1.05
CTSA-204ENST00000372484 M0QZ58 72 aa8.48□□□□□ -1.05
CTSA-204ENST00000372484 R4GN34 69 aa8.38□□□□□ -1.07
CTSA-204ENST00000372484 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
CTSA-204ENST00000372484 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
CTSA-204ENST00000372484 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
CTSA-204ENST00000372484 SPINT4Q6UDR6 99 aa8.34□□□□□ -1.07
CTSA-204ENST00000372484 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
CTSA-204ENST00000372484 ROMO1P60602 79 aa8.3□□□□□ -1.08
CTSA-204ENST00000372484 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
CTSA-204ENST00000372484 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
CTSA-204ENST00000372484 KRTAP25-1Q3LHN0 102 aa8.17□□□□□ -1.1
CTSA-204ENST00000372484 UBR4Q5T4S7 5183 aa8.17□□□□□ -1.1
CTSA-204ENST00000372484 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
CTSA-204ENST00000372484 FAT4Q6V0I7 4981 aa8.13□□□□□ -1.11
CTSA-204ENST00000372484 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
CTSA-204ENST00000372484 M0R2T5 61 aa8.07□□□□□ -1.12
CTSA-204ENST00000372484 MT1HP80294 61 aa8.05□□□□□ -1.12
CTSA-204ENST00000372484 C10orf95Q9H7T3 257 aa7.96□□□□□ -1.14
CTSA-204ENST00000372484 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
CTSA-204ENST00000372484 SPRR2GQ9BYE4 73 aa7.84□□□□□ -1.16
CTSA-204ENST00000372484 MT2AP02795 61 aa7.82□□□□□ -1.16
CTSA-204ENST00000372484 KRTAP10-10P60014 251 aa7.81□□□□□ -1.16
CTSA-204ENST00000372484 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
CTSA-204ENST00000372484 MT1FP04733 61 aa7.8□□□□□ -1.16
CTSA-204ENST00000372484 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
CTSA-204ENST00000372484 PLAC4Q8WY50 150 aa7.7□□□□□ -1.18
CTSA-204ENST00000372484 TNP1P09430 55 aa7.55□□□□□ -1.2
CTSA-204ENST00000372484 KRTAP19-8Q3LI54 63 aa7.55□□□□□ -1.2
CTSA-204ENST00000372484 PP632Q6XCG6 107 aa7.52□□□□□ -1.21
CTSA-204ENST00000372484 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
CTSA-204ENST00000372484 MT1BP07438 61 aa7.45□□□□□ -1.22
CTSA-204ENST00000372484 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
CTSA-204ENST00000372484 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
CTSA-204ENST00000372484 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
CTSA-204ENST00000372484 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
CTSA-204ENST00000372484 MT1XP80297 61 aa7.31□□□□□ -1.24
CTSA-204ENST00000372484 LCE2BO14633 110 aa7.25□□□□□ -1.25
CTSA-204ENST00000372484 H3BS24 57 aa7.21□□□□□ -1.25
CTSA-204ENST00000372484 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
CTSA-204ENST00000372484 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
CTSA-204ENST00000372484 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
CTSA-204ENST00000372484 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
CTSA-204ENST00000372484 USH2AO75445 5202 aa7.04□□□□□ -1.28
CTSA-204ENST00000372484 KRTAP8-1Q8IUC2 63 aa7.01□□□□□ -1.29
CTSA-204ENST00000372484 NDUFAF8A1L188 74 aa6.98□□□□□ -1.29
CTSA-204ENST00000372484 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
CTSA-204ENST00000372484 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
CTSA-204ENST00000372484 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
CTSA-204ENST00000372484 SSPOA2VEC9 5147 aa6.72□□□□□ -1.33
CTSA-204ENST00000372484 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.33
CTSA-204ENST00000372484 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.33
CTSA-204ENST00000372484 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.33
CTSA-204ENST00000372484 KMT2DO14686 5537 aa6.7□□□□□ -1.34
CTSA-204ENST00000372484 KRTAP19-6Q3LI70 58 aa6.66□□□□□ -1.34
CTSA-204ENST00000372484 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
CTSA-204ENST00000372484 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
CTSA-204ENST00000372484 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
CTSA-204ENST00000372484 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
CTSA-204ENST00000372484 MT1EP04732 61 aa6.37□□□□□ -1.39
CTSA-204ENST00000372484 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
CTSA-204ENST00000372484 MT1LQ93083 61 aa6.3□□□□□ -1.4
CTSA-204ENST00000372484 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
CTSA-204ENST00000372484 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
CTSA-204ENST00000372484 A0A0A0MQY5 61 aa6.17□□□□□ -1.42
CTSA-204ENST00000372484 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
CTSA-204ENST00000372484 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
CTSA-204ENST00000372484 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms