RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 DNAH10Q8IVF4 4471 aa5.08□□□□□ -1.6
KDM4A-201ENST00000372396 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
KDM4A-201ENST00000372396 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
KDM4A-201ENST00000372396 DNAH5Q8TE73 4624 aa5.02□□□□□ -1.61
KDM4A-201ENST00000372396 DNAH2Q9P225 4427 aa5.02□□□□□ -1.61
KDM4A-201ENST00000372396 DNAH11Q96DT5 4516 aa5.01□□□□□ -1.61
KDM4A-201ENST00000372396 KRTAP12-2P59991 146 aa5.01□□□□□ -1.61
KDM4A-201ENST00000372396 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
KDM4A-201ENST00000372396 HYDINQ4G0P3 5121 aa5□□□□□ -1.61
KDM4A-201ENST00000372396 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
KDM4A-201ENST00000372396 RYR2Q92736 4967 aa4.97□□□□□ -1.61
KDM4A-201ENST00000372396 KMT2CQ8NEZ4 4911 aaKnown RBP4.95□□□□□ -1.62
KDM4A-201ENST00000372396 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
KDM4A-201ENST00000372396 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
KDM4A-201ENST00000372396 FRAS1Q86XX4 4008 aa4.93□□□□□ -1.62
KDM4A-201ENST00000372396 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
KDM4A-201ENST00000372396 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
KDM4A-201ENST00000372396 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
KDM4A-201ENST00000372396 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
KDM4A-201ENST00000372396 DNAH8Q96JB1 4490 aa4.9□□□□□ -1.62
KDM4A-201ENST00000372396 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.63
KDM4A-201ENST00000372396 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
KDM4A-201ENST00000372396 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
KDM4A-201ENST00000372396 PKD1P98161 4303 aa4.87□□□□□ -1.63
KDM4A-201ENST00000372396 RYR3Q15413 4870 aa4.85□□□□□ -1.63
KDM4A-201ENST00000372396 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
KDM4A-201ENST00000372396 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
KDM4A-201ENST00000372396 FAT1Q14517 4588 aa4.78□□□□□ -1.64
KDM4A-201ENST00000372396 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
KDM4A-201ENST00000372396 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
KDM4A-201ENST00000372396 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
KDM4A-201ENST00000372396 INE1O15225 51 aa4.72□□□□□ -1.65
KDM4A-201ENST00000372396 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
KDM4A-201ENST00000372396 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
KDM4A-201ENST00000372396 RYR1P21817 5038 aa4.68□□□□□ -1.66
KDM4A-201ENST00000372396 TNP1P09430 55 aa4.68□□□□□ -1.66
KDM4A-201ENST00000372396 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
KDM4A-201ENST00000372396 HSPG2P98160 4391 aa4.67□□□□□ -1.66
KDM4A-201ENST00000372396 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
KDM4A-201ENST00000372396 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
KDM4A-201ENST00000372396 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
KDM4A-201ENST00000372396 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.68
KDM4A-201ENST00000372396 HERC2O95714 4834 aa4.52□□□□□ -1.69
KDM4A-201ENST00000372396 FAT3Q8TDW7 4589 aa4.49□□□□□ -1.69
KDM4A-201ENST00000372396 LRP1Q07954 4544 aaKnown RBP4.49□□□□□ -1.69
KDM4A-201ENST00000372396 MYCBP2O75592 4640 aa4.44□□□□□ -1.7
KDM4A-201ENST00000372396 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
KDM4A-201ENST00000372396 TNXBP22105 4242 aa4.43□□□□□ -1.7
KDM4A-201ENST00000372396 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
KDM4A-201ENST00000372396 MT1HP80294 61 aa4.33□□□□□ -1.72
KDM4A-201ENST00000372396 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
KDM4A-201ENST00000372396 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
KDM4A-201ENST00000372396 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
KDM4A-201ENST00000372396 MT2AP02795 61 aa4.23□□□□□ -1.73
KDM4A-201ENST00000372396 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
KDM4A-201ENST00000372396 LRP2P98164 4655 aa4.2□□□□□ -1.74
KDM4A-201ENST00000372396 HERC1Q15751 4861 aa4.19□□□□□ -1.74
KDM4A-201ENST00000372396 MT1FP04733 61 aa4.17□□□□□ -1.74
KDM4A-201ENST00000372396 LPAP08519 4548 aa4.15□□□□□ -1.75
KDM4A-201ENST00000372396 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
KDM4A-201ENST00000372396 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
KDM4A-201ENST00000372396 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
KDM4A-201ENST00000372396 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
KDM4A-201ENST00000372396 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
KDM4A-201ENST00000372396 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
KDM4A-201ENST00000372396 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
KDM4A-201ENST00000372396 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
KDM4A-201ENST00000372396 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
KDM4A-201ENST00000372396 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
KDM4A-201ENST00000372396 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
KDM4A-201ENST00000372396 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
KDM4A-201ENST00000372396 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
KDM4A-201ENST00000372396 KRTAP9-3Q9BYQ3 159 aa3.91□□□□□ -1.78
KDM4A-201ENST00000372396 MT1BP07438 61 aa3.91□□□□□ -1.78
KDM4A-201ENST00000372396 MUC2Q02817 5179 aa3.87□□□□□ -1.79
KDM4A-201ENST00000372396 MT1XP80297 61 aa3.86□□□□□ -1.79
KDM4A-201ENST00000372396 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
KDM4A-201ENST00000372396 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
KDM4A-201ENST00000372396 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
KDM4A-201ENST00000372396 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
KDM4A-201ENST00000372396 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
KDM4A-201ENST00000372396 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
KDM4A-201ENST00000372396 LCE2BO14633 110 aa3.74□□□□□ -1.81
KDM4A-201ENST00000372396 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
KDM4A-201ENST00000372396 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
KDM4A-201ENST00000372396 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
KDM4A-201ENST00000372396 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
KDM4A-201ENST00000372396 CRCT1Q9UGL9 99 aa3.61□□□□□ -1.83
KDM4A-201ENST00000372396 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
KDM4A-201ENST00000372396 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
KDM4A-201ENST00000372396 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
KDM4A-201ENST00000372396 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
KDM4A-201ENST00000372396 LCE2DQ5TA82 110 aaPredicted RBP3.54□□□□□ -1.84
KDM4A-201ENST00000372396 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
KDM4A-201ENST00000372396 MT1GP13640 62 aa3.43□□□□□ -1.86
KDM4A-201ENST00000372396 MT1EP04732 61 aa3.43□□□□□ -1.86
KDM4A-201ENST00000372396 MT1LQ93083 61 aa3.41□□□□□ -1.86
KDM4A-201ENST00000372396 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
KDM4A-201ENST00000372396 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
KDM4A-201ENST00000372396 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms