RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
ATG4A-203ENST00000372232 TYMSOSQ8TAI1 123 aa4.91□□□□□ -1.62
ATG4A-203ENST00000372232 KRTAP17-1Q9BYP8 105 aa4.91□□□□□ -1.62
ATG4A-203ENST00000372232 LUZP6Q538Z0 58 aa4.9□□□□□ -1.62
ATG4A-203ENST00000372232 A0A1B0GU33 70 aa4.9□□□□□ -1.63
ATG4A-203ENST00000372232 K7ERS5 55 aa4.9□□□□□ -1.63
ATG4A-203ENST00000372232 TPRXLQ17RH7 258 aa4.88□□□□□ -1.63
ATG4A-203ENST00000372232 H1FX-AS1Q4G0G2 97 aa4.88□□□□□ -1.63
ATG4A-203ENST00000372232 VPS13BQ7Z7G8 4022 aa4.87□□□□□ -1.63
ATG4A-203ENST00000372232 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
ATG4A-203ENST00000372232 SPINK1P00995 79 aa4.85□□□□□ -1.63
ATG4A-203ENST00000372232 SPINK6Q6UWN8 80 aa4.85□□□□□ -1.63
ATG4A-203ENST00000372232 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
ATG4A-203ENST00000372232 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.64
ATG4A-203ENST00000372232 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
ATG4A-203ENST00000372232 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
ATG4A-203ENST00000372232 KRTAP1-4P0C5Y4 121 aa4.82□□□□□ -1.64
ATG4A-203ENST00000372232 FLG2Q5D862 2391 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-203ENST00000372232 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
ATG4A-203ENST00000372232 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
ATG4A-203ENST00000372232 A0A1B0GVY2 172 aa4.74□□□□□ -1.65
ATG4A-203ENST00000372232 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
ATG4A-203ENST00000372232 COX6B2Q6YFQ2 88 aa4.72□□□□□ -1.65
ATG4A-203ENST00000372232 RPL37P61927 97 aaKnown RBP4.71□□□□□ -1.66
ATG4A-203ENST00000372232 SMR3BP02814 79 aaPredicted RBP4.71□□□□□ -1.66
ATG4A-203ENST00000372232 BIRC6Q9NR09 4857 aa4.69□□□□□ -1.66
ATG4A-203ENST00000372232 APOBP04114 4563 aaKnown RBP4.69□□□□□ -1.66
ATG4A-203ENST00000372232 FAT1Q14517 4588 aa4.69□□□□□ -1.66
ATG4A-203ENST00000372232 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
ATG4A-203ENST00000372232 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
ATG4A-203ENST00000372232 KRTAP10-4P60372 401 aaPredicted RBP4.67□□□□□ -1.66
ATG4A-203ENST00000372232 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
ATG4A-203ENST00000372232 PKHD1L1Q86WI1 4243 aa4.64□□□□□ -1.67
ATG4A-203ENST00000372232 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
ATG4A-203ENST00000372232 RYR1P21817 5038 aa4.59□□□□□ -1.67
ATG4A-203ENST00000372232 HERC2O95714 4834 aa4.58□□□□□ -1.68
ATG4A-203ENST00000372232 HSPG2P98160 4391 aa4.57□□□□□ -1.68
ATG4A-203ENST00000372232 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
ATG4A-203ENST00000372232 C9orf92A6NGG3 77 aa4.55□□□□□ -1.68
ATG4A-203ENST00000372232 A0A0D9SG42 100 aa4.53□□□□□ -1.68
ATG4A-203ENST00000372232 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
ATG4A-203ENST00000372232 S4R3F8 94 aa4.52□□□□□ -1.69
ATG4A-203ENST00000372232 LRP1Q07954 4544 aaKnown RBP4.52□□□□□ -1.69
ATG4A-203ENST00000372232 TNXBP22105 4242 aa4.52□□□□□ -1.69
ATG4A-203ENST00000372232 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
ATG4A-203ENST00000372232 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
ATG4A-203ENST00000372232 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
ATG4A-203ENST00000372232 Q5VSD8 79 aa4.49□□□□□ -1.69
ATG4A-203ENST00000372232 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
ATG4A-203ENST00000372232 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
ATG4A-203ENST00000372232 PLAC4Q8WY50 150 aa4.46□□□□□ -1.69
ATG4A-203ENST00000372232 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
ATG4A-203ENST00000372232 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
ATG4A-203ENST00000372232 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
ATG4A-203ENST00000372232 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
ATG4A-203ENST00000372232 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
ATG4A-203ENST00000372232 MYCBP2O75592 4640 aa4.41□□□□□ -1.7
ATG4A-203ENST00000372232 KRTAP12-1P59990 96 aa4.4□□□□□ -1.7
ATG4A-203ENST00000372232 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
ATG4A-203ENST00000372232 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
ATG4A-203ENST00000372232 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.72
ATG4A-203ENST00000372232 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
ATG4A-203ENST00000372232 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
ATG4A-203ENST00000372232 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
ATG4A-203ENST00000372232 HERC1Q15751 4861 aa4.28□□□□□ -1.72
ATG4A-203ENST00000372232 LRP2P98164 4655 aa4.23□□□□□ -1.73
ATG4A-203ENST00000372232 LPAP08519 4548 aa4.23□□□□□ -1.73
ATG4A-203ENST00000372232 M0QZ58 72 aa4.21□□□□□ -1.74
ATG4A-203ENST00000372232 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
ATG4A-203ENST00000372232 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
ATG4A-203ENST00000372232 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
ATG4A-203ENST00000372232 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
ATG4A-203ENST00000372232 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
ATG4A-203ENST00000372232 MT3P25713 68 aa4.11□□□□□ -1.75
ATG4A-203ENST00000372232 INE1O15225 51 aa4.1□□□□□ -1.75
ATG4A-203ENST00000372232 R4GN34 69 aa4.09□□□□□ -1.75
ATG4A-203ENST00000372232 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
ATG4A-203ENST00000372232 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
ATG4A-203ENST00000372232 KRTAP4-1Q9BYQ7 146 aa4.03□□□□□ -1.77
ATG4A-203ENST00000372232 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
ATG4A-203ENST00000372232 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
ATG4A-203ENST00000372232 MUC2Q02817 5179 aa3.95□□□□□ -1.78
ATG4A-203ENST00000372232 RNF213Q63HN8 5207 aa3.95□□□□□ -1.78
ATG4A-203ENST00000372232 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
ATG4A-203ENST00000372232 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
ATG4A-203ENST00000372232 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
ATG4A-203ENST00000372232 KRTAP9-8Q9BYQ0 159 aa3.88□□□□□ -1.79
ATG4A-203ENST00000372232 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
ATG4A-203ENST00000372232 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
ATG4A-203ENST00000372232 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
ATG4A-203ENST00000372232 TNP1P09430 55 aa3.76□□□□□ -1.81
ATG4A-203ENST00000372232 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
ATG4A-203ENST00000372232 FAT4Q6V0I7 4981 aa3.75□□□□□ -1.81
ATG4A-203ENST00000372232 MT1HP80294 61 aa3.66□□□□□ -1.82
ATG4A-203ENST00000372232 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
ATG4A-203ENST00000372232 M0R2T5 61 aa3.64□□□□□ -1.83
ATG4A-203ENST00000372232 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
ATG4A-203ENST00000372232 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
ATG4A-203ENST00000372232 MT2AP02795 61 aa3.57□□□□□ -1.84
ATG4A-203ENST00000372232 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms