RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 COX6B2Q6YFQ2 88 aa12.32□□□□□ -0.44
LHX3-201ENST00000371746 BIRC6Q9NR09 4857 aa12.3□□□□□ -0.44
LHX3-201ENST00000371746 A0A1B0GU69 56 aa12.27□□□□□ -0.45
LHX3-201ENST00000371746 CDC42SE1Q9NRR8 79 aa12.26□□□□□ -0.45
LHX3-201ENST00000371746 J3QL48 77 aa12.24□□□□□ -0.45
LHX3-201ENST00000371746 KTN1-AS1Q86SY8 53 aa12.17□□□□□ -0.46
LHX3-201ENST00000371746 A6NN06 94 aa12.15□□□□□ -0.47
LHX3-201ENST00000371746 KRTAP3-3Q9BYR6 98 aa11.97□□□□□ -0.49
LHX3-201ENST00000371746 RBM12B-AS1Q9P1G2 102 aa11.96□□□□□ -0.49
LHX3-201ENST00000371746 PCLOQ9Y6V0 5065 aa11.96□□□□□ -0.5
LHX3-201ENST00000371746 UQCR11O14957 56 aa11.94□□□□□ -0.5
LHX3-201ENST00000371746 S4R3F8 94 aa11.93□□□□□ -0.5
LHX3-201ENST00000371746 H1FX-AS1Q4G0G2 97 aa11.89□□□□□ -0.51
LHX3-201ENST00000371746 SEC61BP60468 96 aaKnown RBP11.88□□□□□ -0.51
LHX3-201ENST00000371746 MIR22HGQ0VDD5 57 aa11.87□□□□□ -0.51
LHX3-201ENST00000371746 SPATA8Q6RVD6 105 aa11.85□□□□□ -0.51
LHX3-201ENST00000371746 HERC1Q15751 4861 aa11.84□□□□□ -0.51
LHX3-201ENST00000371746 KRTAP4-1Q9BYQ7 146 aa11.79□□□□□ -0.52
LHX3-201ENST00000371746 A0A1B0GU33 70 aa11.76□□□□□ -0.53
LHX3-201ENST00000371746 MUC17Q685J3 4493 aa11.73□□□□□ -0.53
LHX3-201ENST00000371746 H0YAA0 97 aa11.72□□□□□ -0.53
LHX3-201ENST00000371746 KRTAP10-6P60371 365 aaPredicted RBP11.67□□□□□ -0.54
LHX3-201ENST00000371746 PRAC1Q96KF2 57 aa11.67□□□□□ -0.54
LHX3-201ENST00000371746 MUC2Q02817 5179 aa11.65□□□□□ -0.54
LHX3-201ENST00000371746 KRTAP3-2Q9BYR7 98 aa11.65□□□□□ -0.54
LHX3-201ENST00000371746 ADM2Q7Z4H4 148 aa11.64□□□□□ -0.55
LHX3-201ENST00000371746 HMCN2Q8NDA2 5059 aa11.63□□□□□ -0.55
LHX3-201ENST00000371746 CSAG1Q6PB30 78 aa11.59□□□□□ -0.55
LHX3-201ENST00000371746 P0C880 135 aa11.57□□□□□ -0.56
LHX3-201ENST00000371746 KRTAP13-4Q3LI77 160 aa11.48□□□□□ -0.57
LHX3-201ENST00000371746 KRTAP19-2Q3LHN2 52 aa11.47□□□□□ -0.57
LHX3-201ENST00000371746 A0A0D9SG42 100 aa11.34□□□□□ -0.59
LHX3-201ENST00000371746 LINC01554Q52M75 96 aa11.31□□□□□ -0.6
LHX3-201ENST00000371746 UBR4Q5T4S7 5183 aa11.23□□□□□ -0.61
LHX3-201ENST00000371746 FLGP20930 4061 aaPredicted RBP11.21□□□□□ -0.61
LHX3-201ENST00000371746 K7ERS5 55 aa11.17□□□□□ -0.62
LHX3-201ENST00000371746 M0QZ58 72 aa11.13□□□□□ -0.63
LHX3-201ENST00000371746 RNF213Q63HN8 5207 aa11.12□□□□□ -0.63
LHX3-201ENST00000371746 FAT4Q6V0I7 4981 aa11.12□□□□□ -0.63
LHX3-201ENST00000371746 LORP23490 312 aaPredicted RBP11.08□□□□□ -0.64
LHX3-201ENST00000371746 R4GN34 69 aa11.05□□□□□ -0.64
LHX3-201ENST00000371746 KRTAP12-2P59991 146 aa11.05□□□□□ -0.64
LHX3-201ENST00000371746 LCE2CQ5TA81 110 aa11.05□□□□□ -0.64
LHX3-201ENST00000371746 KRTAP12-1P59990 96 aa11□□□□□ -0.65
LHX3-201ENST00000371746 SPINT4Q6UDR6 99 aa10.99□□□□□ -0.65
LHX3-201ENST00000371746 KRTAP25-1Q3LHN0 102 aa10.93□□□□□ -0.66
LHX3-201ENST00000371746 ROMO1P60602 79 aa10.84□□□□□ -0.67
LHX3-201ENST00000371746 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
LHX3-201ENST00000371746 MT1HP80294 61 aa10.78□□□□□ -0.68
LHX3-201ENST00000371746 M0R2T5 61 aa10.77□□□□□ -0.69
LHX3-201ENST00000371746 H3BS24 57 aa10.57□□□□□ -0.72
LHX3-201ENST00000371746 C10orf95Q9H7T3 257 aa10.48□□□□□ -0.73
LHX3-201ENST00000371746 MT2AP02795 61 aa10.47□□□□□ -0.73
LHX3-201ENST00000371746 MT1FP04733 61 aa10.45□□□□□ -0.74
LHX3-201ENST00000371746 KRTAP9-8Q9BYQ0 159 aa10.45□□□□□ -0.74
LHX3-201ENST00000371746 KRTAP10-10P60014 251 aa10.42□□□□□ -0.74
LHX3-201ENST00000371746 CAMK2N1Q7Z7J9 78 aa10.42□□□□□ -0.74
LHX3-201ENST00000371746 KRTAP19-1Q8IUB9 90 aa10.42□□□□□ -0.74
LHX3-201ENST00000371746 SPRR2GQ9BYE4 73 aa10.4□□□□□ -0.74
LHX3-201ENST00000371746 PLAC4Q8WY50 150 aa10.16□□□□□ -0.78
LHX3-201ENST00000371746 KRTAP9-3Q9BYQ3 159 aa10.04□□□□□ -0.8
LHX3-201ENST00000371746 KRTAP19-8Q3LI54 63 aa10.03□□□□□ -0.8
LHX3-201ENST00000371746 KRTAP15-1Q3LI76 137 aa10.01□□□□□ -0.81
LHX3-201ENST00000371746 LCE2AQ5TA79 106 aaPredicted RBP10.01□□□□□ -0.81
LHX3-201ENST00000371746 MT1BP07438 61 aa9.96□□□□□ -0.82
LHX3-201ENST00000371746 TNP1P09430 55 aa9.92□□□□□ -0.82
LHX3-201ENST00000371746 NDUFAF8A1L188 74 aa9.88□□□□□ -0.83
LHX3-201ENST00000371746 PP632Q6XCG6 107 aa9.78□□□□□ -0.84
LHX3-201ENST00000371746 LCE2BO14633 110 aa9.74□□□□□ -0.85
LHX3-201ENST00000371746 KRTAP10-5P60370 271 aa9.74□□□□□ -0.85
LHX3-201ENST00000371746 MT1XP80297 61 aa9.74□□□□□ -0.85
LHX3-201ENST00000371746 USH2AO75445 5202 aa9.66□□□□□ -0.86
LHX3-201ENST00000371746 KRTAP23-1A1A580 65 aa9.6□□□□□ -0.87
LHX3-201ENST00000371746 LCE3AQ5TA76 89 aa9.52□□□□□ -0.89
LHX3-201ENST00000371746 PRO2289Q9P1D8 64 aa9.46□□□□□ -0.89
LHX3-201ENST00000371746 KRTAP10-7P60409 375 aaPredicted RBP9.43□□□□□ -0.9
LHX3-201ENST00000371746 KRTAP10-12P60413 245 aa9.36□□□□□ -0.91
LHX3-201ENST00000371746 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
LHX3-201ENST00000371746 FSIP2Q5CZC0 6907 aa9.19□□□□□ -0.94
LHX3-201ENST00000371746 KMT2DO14686 5537 aa9.14□□□□□ -0.95
LHX3-201ENST00000371746 SSPOA2VEC9 5147 aa9.12□□□□□ -0.95
LHX3-201ENST00000371746 LUZP6Q538Z0 58 aa9.12□□□□□ -0.95
LHX3-201ENST00000371746 KRTAP12-3P60328 96 aa9.09□□□□□ -0.96
LHX3-201ENST00000371746 KRTAP4-8A0A0G2JLE6 195 aa9.01□□□□□ -0.97
LHX3-201ENST00000371746 KRTAP4-8Q9BYQ9 185 aa9.01□□□□□ -0.97
LHX3-201ENST00000371746 KRTAP19-5Q3LI72 72 aa8.93□□□□□ -0.98
LHX3-201ENST00000371746 KRTAP19-6Q3LI70 58 aa8.92□□□□□ -0.98
LHX3-201ENST00000371746 SPRR5A0A1B0GTR4 108 aa8.9□□□□□ -0.98
LHX3-201ENST00000371746 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
LHX3-201ENST00000371746 A0A0A0MQY5 61 aa8.75□□□□□ -1.01
LHX3-201ENST00000371746 KRTAP19-7Q3SYF9 63 aa8.69□□□□□ -1.02
LHX3-201ENST00000371746 FCGBPQ9Y6R7 5405 aaPredicted RBP8.66□□□□□ -1.02
LHX3-201ENST00000371746 LCE3CQ5T5A8 94 aa8.5□□□□□ -1.05
LHX3-201ENST00000371746 MT1EP04732 61 aa8.48□□□□□ -1.05
LHX3-201ENST00000371746 MT1LQ93083 61 aa8.38□□□□□ -1.07
LHX3-201ENST00000371746 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
LHX3-201ENST00000371746 KRTAP4-7Q9BYR0 210 aa8.35□□□□□ -1.07
LHX3-201ENST00000371746 MACF1Q9UPN3 7388 aaKnown RBP8.28□□□□□ -1.08
LHX3-201ENST00000371746 MUC12Q9UKN1 5478 aa8.28□□□□□ -1.08
LHX3-201ENST00000371746 KRTAP9-6A8MVA2 160 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms