RNA–Protein interactions for RNA: ENST00000371459.5

SUPT3H-202, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT3H, Length 2,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-202ENST00000371459 HRNRQ86YZ3 2850 aaPredicted RBP2.32□□□□□ -2.04
SUPT3H-202ENST00000371459 NIPBLQ6KC79 2804 aaeCLIP2.31□□□□□ -2.04
SUPT3H-202ENST00000371459 HIVEP3Q5T1R4 2406 aa2.31□□□□□ -2.04
SUPT3H-202ENST00000371459 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
SUPT3H-202ENST00000371459 PCLOQ9Y6V0 5065 aa2.3□□□□□ -2.04
SUPT3H-202ENST00000371459 A0A0D9SG42 100 aa2.3□□□□□ -2.04
SUPT3H-202ENST00000371459 APCP25054 2843 aa2.29□□□□□ -2.04
SUPT3H-202ENST00000371459 JMJD1CQ15652 2540 aa2.29□□□□□ -2.04
SUPT3H-202ENST00000371459 DCHS2Q6V1P9 2916 aa2.29□□□□□ -2.04
SUPT3H-202ENST00000371459 NBEAL1Q6ZS30 2694 aa2.29□□□□□ -2.04
SUPT3H-202ENST00000371459 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
SUPT3H-202ENST00000371459 ATRQ13535 2644 aa2.28□□□□□ -2.04
SUPT3H-202ENST00000371459 COL6A5A8TX70 2615 aa2.28□□□□□ -2.04
SUPT3H-202ENST00000371459 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
SUPT3H-202ENST00000371459 CCDC168Q8NDH2 2452 aa2.26□□□□□ -2.05
SUPT3H-202ENST00000371459 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SUPT3H-202ENST00000371459 NOTCH1P46531 2555 aa2.25□□□□□ -2.05
SUPT3H-202ENST00000371459 SONP18583 2426 aaKnown RBP2.25□□□□□ -2.05
SUPT3H-202ENST00000371459 CSMD2Q7Z408 3487 aa2.24□□□□□ -2.05
SUPT3H-202ENST00000371459 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
SUPT3H-202ENST00000371459 STAB1Q9NY15 2570 aa2.23□□□□□ -2.05
SUPT3H-202ENST00000371459 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
SUPT3H-202ENST00000371459 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
SUPT3H-202ENST00000371459 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
SUPT3H-202ENST00000371459 Q5VSD8 79 aa2.22□□□□□ -2.05
SUPT3H-202ENST00000371459 ACANP16112 2415 aa2.21□□□□□ -2.06
SUPT3H-202ENST00000371459 BIRC6Q9NR09 4857 aa2.21□□□□□ -2.06
SUPT3H-202ENST00000371459 PKD1L1Q8TDX9 2849 aa2.2□□□□□ -2.06
SUPT3H-202ENST00000371459 ZNF469Q96JG9 3925 aaPredicted RBP2.2□□□□□ -2.06
SUPT3H-202ENST00000371459 DNAH1Q9P2D7 4330 aa2.2□□□□□ -2.06
SUPT3H-202ENST00000371459 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
SUPT3H-202ENST00000371459 KIAA1109Q2LD37 5005 aa2.18□□□□□ -2.06
SUPT3H-202ENST00000371459 RYR3Q15413 4870 aa2.18□□□□□ -2.06
SUPT3H-202ENST00000371459 VWFP04275 2813 aa2.17□□□□□ -2.06
SUPT3H-202ENST00000371459 NSD1Q96L73 2696 aaPredicted RBP2.16□□□□□ -2.06
SUPT3H-202ENST00000371459 FLNAP21333 2647 aaKnown RBP2.16□□□□□ -2.06
SUPT3H-202ENST00000371459 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
SUPT3H-202ENST00000371459 CUBNO60494 3623 aa2.16□□□□□ -2.06
SUPT3H-202ENST00000371459 MEGF8Q7Z7M0 2845 aa2.16□□□□□ -2.06
SUPT3H-202ENST00000371459 NBEAL2Q6ZNJ1 2754 aa2.16□□□□□ -2.06
SUPT3H-202ENST00000371459 TGP01266 2768 aa2.16□□□□□ -2.06
SUPT3H-202ENST00000371459 MXRA5Q9NR99 2828 aa2.15□□□□□ -2.07
SUPT3H-202ENST00000371459 ANK2Q01484 3957 aa2.15□□□□□ -2.07
SUPT3H-202ENST00000371459 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
SUPT3H-202ENST00000371459 SRRM2Q9UQ35 2752 aaKnown RBP2.13□□□□□ -2.07
SUPT3H-202ENST00000371459 SVEP1Q4LDE5 3571 aa2.13□□□□□ -2.07
SUPT3H-202ENST00000371459 SMR3AQ99954 134 aa2.13□□□□□ -2.07
SUPT3H-202ENST00000371459 VPS13CQ709C8 3753 aa2.13□□□□□ -2.07
SUPT3H-202ENST00000371459 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
SUPT3H-202ENST00000371459 ANK3Q12955 4377 aaKnown RBP2.12□□□□□ -2.07
SUPT3H-202ENST00000371459 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
SUPT3H-202ENST00000371459 TRRAPQ9Y4A5 3859 aa2.09□□□□□ -2.07
SUPT3H-202ENST00000371459 FRAS1Q86XX4 4008 aa2.09□□□□□ -2.07
SUPT3H-202ENST00000371459 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
SUPT3H-202ENST00000371459 MGAM2Q2M2H8 2515 aa2.09□□□□□ -2.08
SUPT3H-202ENST00000371459 TNP1P09430 55 aa2.08□□□□□ -2.08
SUPT3H-202ENST00000371459 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
SUPT3H-202ENST00000371459 C9orf92A6NGG3 77 aa2.06□□□□□ -2.08
SUPT3H-202ENST00000371459 EPPK1P58107 5090 aaKnown RBP2.06□□□□□ -2.08
SUPT3H-202ENST00000371459 PRKDCP78527 4128 aaKnown RBP2.06□□□□□ -2.08
SUPT3H-202ENST00000371459 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
SUPT3H-202ENST00000371459 ZANQ9Y493 2812 aa2.05□□□□□ -2.08
SUPT3H-202ENST00000371459 DMBT1Q9UGM3 2413 aaPredicted RBP2.04□□□□□ -2.08
SUPT3H-202ENST00000371459 RYR1P21817 5038 aa2.03□□□□□ -2.08
SUPT3H-202ENST00000371459 TENM1Q9UKZ4 2725 aa2.03□□□□□ -2.08
SUPT3H-202ENST00000371459 DNAH3Q8TD57 4116 aa2.03□□□□□ -2.08
SUPT3H-202ENST00000371459 DYNC2H1Q8NCM8 4307 aaKnown RBP2.02□□□□□ -2.09
SUPT3H-202ENST00000371459 LYSTQ99698 3801 aa2.01□□□□□ -2.09
SUPT3H-202ENST00000371459 HYDINQ4G0P3 5121 aa2.01□□□□□ -2.09
SUPT3H-202ENST00000371459 DNAH11Q96DT5 4516 aa2□□□□□ -2.09
SUPT3H-202ENST00000371459 CSMD3Q7Z407 3707 aa2□□□□□ -2.09
SUPT3H-202ENST00000371459 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
SUPT3H-202ENST00000371459 COL7A1Q02388 2944 aa1.99□□□□□ -2.09
SUPT3H-202ENST00000371459 CMYA5Q8N3K9 4069 aa1.99□□□□□ -2.09
SUPT3H-202ENST00000371459 DNAH17Q9UFH2 4485 aa1.99□□□□□ -2.09
SUPT3H-202ENST00000371459 DNAH6Q9C0G6 4158 aa1.99□□□□□ -2.09
SUPT3H-202ENST00000371459 HERC2O95714 4834 aa1.99□□□□□ -2.09
SUPT3H-202ENST00000371459 RYR2Q92736 4967 aa1.98□□□□□ -2.09
SUPT3H-202ENST00000371459 DNAH9Q9NYC9 4486 aa1.98□□□□□ -2.09
SUPT3H-202ENST00000371459 DNAH7Q8WXX0 4024 aa1.98□□□□□ -2.09
SUPT3H-202ENST00000371459 DNAH10Q8IVF4 4471 aa1.98□□□□□ -2.09
SUPT3H-202ENST00000371459 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
SUPT3H-202ENST00000371459 MUC2Q02817 5179 aa1.95□□□□□ -2.1
SUPT3H-202ENST00000371459 HUWE1Q7Z6Z7 4374 aaKnown RBP1.95□□□□□ -2.1
SUPT3H-202ENST00000371459 DNAH2Q9P225 4427 aa1.95□□□□□ -2.1
SUPT3H-202ENST00000371459 SACSQ9NZJ4 4579 aa1.95□□□□□ -2.1
SUPT3H-202ENST00000371459 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
SUPT3H-202ENST00000371459 TENM3Q9P273 2699 aa1.94□□□□□ -2.1
SUPT3H-202ENST00000371459 HECTD4Q9Y4D8 3996 aa1.92□□□□□ -2.1
SUPT3H-202ENST00000371459 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
SUPT3H-202ENST00000371459 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
SUPT3H-202ENST00000371459 HERC1Q15751 4861 aa1.87□□□□□ -2.11
SUPT3H-202ENST00000371459 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
SUPT3H-202ENST00000371459 KMT2AQ03164 3969 aa1.86□□□□□ -2.11
SUPT3H-202ENST00000371459 ABCA13Q86UQ4 5058 aa1.86□□□□□ -2.11
SUPT3H-202ENST00000371459 KRTAP8-1Q8IUC2 63 aa1.86□□□□□ -2.11
SUPT3H-202ENST00000371459 APOBP04114 4563 aaKnown RBP1.83□□□□□ -2.12
SUPT3H-202ENST00000371459 PKHD1L1Q86WI1 4243 aa1.82□□□□□ -2.12
SUPT3H-202ENST00000371459 PKD1P98161 4303 aa1.82□□□□□ -2.12
SUPT3H-202ENST00000371459 LRP1Q07954 4544 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms