RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PKHD1L1Q86WI1 4243 aa5.04□□□□□ -1.6
LRRC40-201ENST00000370952 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
LRRC40-201ENST00000370952 APOBP04114 4563 aaKnown RBP5.01□□□□□ -1.61
LRRC40-201ENST00000370952 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
LRRC40-201ENST00000370952 HSPG2P98160 4391 aa4.98□□□□□ -1.61
LRRC40-201ENST00000370952 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
LRRC40-201ENST00000370952 NDUFAF8A1L188 74 aa4.96□□□□□ -1.62
LRRC40-201ENST00000370952 FAT3Q8TDW7 4589 aa4.96□□□□□ -1.62
LRRC40-201ENST00000370952 MYCBP2O75592 4640 aa4.96□□□□□ -1.62
LRRC40-201ENST00000370952 KRTAP21-3Q3LHN1 58 aa4.92□□□□□ -1.62
LRRC40-201ENST00000370952 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
LRRC40-201ENST00000370952 S4R3F8 94 aa4.91□□□□□ -1.62
LRRC40-201ENST00000370952 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
LRRC40-201ENST00000370952 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
LRRC40-201ENST00000370952 LRP1Q07954 4544 aaKnown RBP4.91□□□□□ -1.62
LRRC40-201ENST00000370952 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
LRRC40-201ENST00000370952 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
LRRC40-201ENST00000370952 TNXBP22105 4242 aa4.81□□□□□ -1.64
LRRC40-201ENST00000370952 KMT2CQ8NEZ4 4911 aaKnown RBP4.79□□□□□ -1.64
LRRC40-201ENST00000370952 LPAP08519 4548 aa4.78□□□□□ -1.64
LRRC40-201ENST00000370952 XP32Q5T750 250 aa4.77□□□□□ -1.65
LRRC40-201ENST00000370952 RYR2Q92736 4967 aa4.76□□□□□ -1.65
LRRC40-201ENST00000370952 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
LRRC40-201ENST00000370952 LRP2P98164 4655 aa4.7□□□□□ -1.66
LRRC40-201ENST00000370952 RYR3Q15413 4870 aa4.68□□□□□ -1.66
LRRC40-201ENST00000370952 M0QZ58 72 aa4.67□□□□□ -1.66
LRRC40-201ENST00000370952 Q5VSD8 79 aa4.59□□□□□ -1.67
LRRC40-201ENST00000370952 PLAC4Q8WY50 150 aa4.59□□□□□ -1.67
LRRC40-201ENST00000370952 R4GN34 69 aa4.58□□□□□ -1.68
LRRC40-201ENST00000370952 RYR1P21817 5038 aa4.54□□□□□ -1.68
LRRC40-201ENST00000370952 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
LRRC40-201ENST00000370952 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
LRRC40-201ENST00000370952 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
LRRC40-201ENST00000370952 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
LRRC40-201ENST00000370952 EPPK1P58107 5090 aaKnown RBP4.51□□□□□ -1.69
LRRC40-201ENST00000370952 LUZP6Q538Z0 58 aa4.51□□□□□ -1.69
LRRC40-201ENST00000370952 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
LRRC40-201ENST00000370952 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.7
LRRC40-201ENST00000370952 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
LRRC40-201ENST00000370952 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
LRRC40-201ENST00000370952 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
LRRC40-201ENST00000370952 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
LRRC40-201ENST00000370952 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
LRRC40-201ENST00000370952 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
LRRC40-201ENST00000370952 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
LRRC40-201ENST00000370952 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
LRRC40-201ENST00000370952 MUC2Q02817 5179 aa4.25□□□□□ -1.73
LRRC40-201ENST00000370952 TNP1P09430 55 aa4.22□□□□□ -1.73
LRRC40-201ENST00000370952 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
LRRC40-201ENST00000370952 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
LRRC40-201ENST00000370952 HERC2O95714 4834 aa4.2□□□□□ -1.74
LRRC40-201ENST00000370952 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
LRRC40-201ENST00000370952 FLGP20930 4061 aaPredicted RBP4.16□□□□□ -1.74
LRRC40-201ENST00000370952 HERC1Q15751 4861 aa4.14□□□□□ -1.75
LRRC40-201ENST00000370952 PCLOQ9Y6V0 5065 aa4.14□□□□□ -1.75
LRRC40-201ENST00000370952 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
LRRC40-201ENST00000370952 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
LRRC40-201ENST00000370952 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
LRRC40-201ENST00000370952 J3QL48 77 aa4.04□□□□□ -1.76
LRRC40-201ENST00000370952 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
LRRC40-201ENST00000370952 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
LRRC40-201ENST00000370952 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.78
LRRC40-201ENST00000370952 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
LRRC40-201ENST00000370952 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
LRRC40-201ENST00000370952 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
LRRC40-201ENST00000370952 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
LRRC40-201ENST00000370952 M0R2T5 61 aa3.85□□□□□ -1.79
LRRC40-201ENST00000370952 INE1O15225 51 aa3.85□□□□□ -1.79
LRRC40-201ENST00000370952 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
LRRC40-201ENST00000370952 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
LRRC40-201ENST00000370952 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
LRRC40-201ENST00000370952 MT1FP04733 61 aa3.79□□□□□ -1.8
LRRC40-201ENST00000370952 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
LRRC40-201ENST00000370952 MT2AP02795 61 aa3.76□□□□□ -1.81
LRRC40-201ENST00000370952 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
LRRC40-201ENST00000370952 MT1HP80294 61 aa3.74□□□□□ -1.81
LRRC40-201ENST00000370952 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
LRRC40-201ENST00000370952 MT1XP80297 61 aa3.73□□□□□ -1.81
LRRC40-201ENST00000370952 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
LRRC40-201ENST00000370952 MT1BP07438 61 aa3.7□□□□□ -1.82
LRRC40-201ENST00000370952 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
LRRC40-201ENST00000370952 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
LRRC40-201ENST00000370952 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
LRRC40-201ENST00000370952 KMT2DO14686 5537 aa3.62□□□□□ -1.83
LRRC40-201ENST00000370952 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
LRRC40-201ENST00000370952 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
LRRC40-201ENST00000370952 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
LRRC40-201ENST00000370952 USH2AO75445 5202 aa3.54□□□□□ -1.84
LRRC40-201ENST00000370952 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
LRRC40-201ENST00000370952 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
LRRC40-201ENST00000370952 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
LRRC40-201ENST00000370952 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
LRRC40-201ENST00000370952 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
LRRC40-201ENST00000370952 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
LRRC40-201ENST00000370952 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
LRRC40-201ENST00000370952 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
LRRC40-201ENST00000370952 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
LRRC40-201ENST00000370952 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
LRRC40-201ENST00000370952 LCE2BO14633 110 aa3.37□□□□□ -1.87
LRRC40-201ENST00000370952 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms