RNA–Protein interactions for RNA: ENST00000369969.6

CLCC1-205, Transcript of chloride channel CLIC like 1, humanhuman

TSL 5 BASIC

Gene CLCC1, Length 4,343 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-205ENST00000369969 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
CLCC1-205ENST00000369969 A8MUU9 505 aa3.51□□□□□ -1.85
CLCC1-205ENST00000369969 RPL37P61927 97 aaKnown RBP3.51□□□□□ -1.85
CLCC1-205ENST00000369969 C20orf166-AS1Q96NR2 134 aa3.5□□□□□ -1.85
CLCC1-205ENST00000369969 R4GN34 69 aa3.48□□□□□ -1.85
CLCC1-205ENST00000369969 APOBP04114 4563 aaKnown RBP3.48□□□□□ -1.85
CLCC1-205ENST00000369969 LORP23490 312 aaPredicted RBP3.48□□□□□ -1.85
CLCC1-205ENST00000369969 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
CLCC1-205ENST00000369969 M0R2T5 61 aa3.44□□□□□ -1.86
CLCC1-205ENST00000369969 ROMO1P60602 79 aa3.44□□□□□ -1.86
CLCC1-205ENST00000369969 KRTAP3-1Q9BYR8 98 aa3.43□□□□□ -1.86
CLCC1-205ENST00000369969 M0QZ58 72 aa3.42□□□□□ -1.86
CLCC1-205ENST00000369969 H0YAA0 97 aa3.42□□□□□ -1.86
CLCC1-205ENST00000369969 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.86
CLCC1-205ENST00000369969 TNXBP22105 4242 aa3.39□□□□□ -1.87
CLCC1-205ENST00000369969 FAT1Q14517 4588 aa3.39□□□□□ -1.87
CLCC1-205ENST00000369969 XP32Q5T750 250 aa3.38□□□□□ -1.87
CLCC1-205ENST00000369969 A0A1B0GVY2 172 aa3.37□□□□□ -1.87
CLCC1-205ENST00000369969 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
CLCC1-205ENST00000369969 HSPG2P98160 4391 aa3.36□□□□□ -1.87
CLCC1-205ENST00000369969 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
CLCC1-205ENST00000369969 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
CLCC1-205ENST00000369969 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.87
CLCC1-205ENST00000369969 KRTAP10-8P60410 259 aa3.34□□□□□ -1.87
CLCC1-205ENST00000369969 TPRXLQ17RH7 258 aa3.33□□□□□ -1.88
CLCC1-205ENST00000369969 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
CLCC1-205ENST00000369969 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
CLCC1-205ENST00000369969 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.89
CLCC1-205ENST00000369969 RYR2Q92736 4967 aa3.26□□□□□ -1.89
CLCC1-205ENST00000369969 KRTAP13-4Q3LI77 160 aa3.25□□□□□ -1.89
CLCC1-205ENST00000369969 LPAP08519 4548 aa3.25□□□□□ -1.89
CLCC1-205ENST00000369969 KMT2CQ8NEZ4 4911 aaKnown RBP3.23□□□□□ -1.89
CLCC1-205ENST00000369969 MYCBP2O75592 4640 aa3.21□□□□□ -1.89
CLCC1-205ENST00000369969 P0C880 135 aa3.21□□□□□ -1.9
CLCC1-205ENST00000369969 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
CLCC1-205ENST00000369969 TNP1P09430 55 aa3.17□□□□□ -1.9
CLCC1-205ENST00000369969 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
CLCC1-205ENST00000369969 RYR1P21817 5038 aa3.13□□□□□ -1.91
CLCC1-205ENST00000369969 LRP2P98164 4655 aa3.12□□□□□ -1.91
CLCC1-205ENST00000369969 KRTAP12-2P59991 146 aa3.12□□□□□ -1.91
CLCC1-205ENST00000369969 KRTAP17-1Q9BYP8 105 aa3.12□□□□□ -1.91
CLCC1-205ENST00000369969 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
CLCC1-205ENST00000369969 RYR3Q15413 4870 aa3.11□□□□□ -1.91
CLCC1-205ENST00000369969 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
CLCC1-205ENST00000369969 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
CLCC1-205ENST00000369969 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
CLCC1-205ENST00000369969 KRTAP10-10P60014 251 aa3.07□□□□□ -1.92
CLCC1-205ENST00000369969 MUC17Q685J3 4493 aa3.06□□□□□ -1.92
CLCC1-205ENST00000369969 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
CLCC1-205ENST00000369969 KIAA1109Q2LD37 5005 aa3.02□□□□□ -1.93
CLCC1-205ENST00000369969 KRTAP19-4Q3LI73 84 aa3.01□□□□□ -1.93
CLCC1-205ENST00000369969 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
CLCC1-205ENST00000369969 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.93
CLCC1-205ENST00000369969 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.94
CLCC1-205ENST00000369969 KRTAP19-2Q3LHN2 52 aa2.94□□□□□ -1.94
CLCC1-205ENST00000369969 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
CLCC1-205ENST00000369969 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
CLCC1-205ENST00000369969 BIRC6Q9NR09 4857 aa2.88□□□□□ -1.95
CLCC1-205ENST00000369969 MUC2Q02817 5179 aa2.85□□□□□ -1.95
CLCC1-205ENST00000369969 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
CLCC1-205ENST00000369969 HERC1Q15751 4861 aa2.82□□□□□ -1.96
CLCC1-205ENST00000369969 HERC2O95714 4834 aa2.77□□□□□ -1.97
CLCC1-205ENST00000369969 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
CLCC1-205ENST00000369969 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
CLCC1-205ENST00000369969 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
CLCC1-205ENST00000369969 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
CLCC1-205ENST00000369969 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
CLCC1-205ENST00000369969 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
CLCC1-205ENST00000369969 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
CLCC1-205ENST00000369969 MT1HP80294 61 aa2.64□□□□□ -1.99
CLCC1-205ENST00000369969 KRTAP19-1Q8IUB9 90 aa2.64□□□□□ -1.99
CLCC1-205ENST00000369969 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
CLCC1-205ENST00000369969 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
CLCC1-205ENST00000369969 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
CLCC1-205ENST00000369969 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
CLCC1-205ENST00000369969 MT2AP02795 61 aa2.61□□□□□ -1.99
CLCC1-205ENST00000369969 KRTAP9-6A0A140TA67 174 aa2.57□□□□□ -2
CLCC1-205ENST00000369969 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
CLCC1-205ENST00000369969 MT1FP04733 61 aa2.56□□□□□ -2
CLCC1-205ENST00000369969 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
CLCC1-205ENST00000369969 INE1O15225 51 aa2.54□□□□□ -2
CLCC1-205ENST00000369969 RNF213Q63HN8 5207 aa2.54□□□□□ -2
CLCC1-205ENST00000369969 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
CLCC1-205ENST00000369969 KRTAP9-8Q9BYQ0 159 aa2.52□□□□□ -2.01
CLCC1-205ENST00000369969 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
CLCC1-205ENST00000369969 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
CLCC1-205ENST00000369969 MT1XP80297 61 aa2.49□□□□□ -2.01
CLCC1-205ENST00000369969 MT1BP07438 61 aa2.49□□□□□ -2.01
CLCC1-205ENST00000369969 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
CLCC1-205ENST00000369969 MT3P25713 68 aa2.44□□□□□ -2.02
CLCC1-205ENST00000369969 LCE3BQ5TA77 95 aa2.44□□□□□ -2.02
CLCC1-205ENST00000369969 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
CLCC1-205ENST00000369969 KRTAP10-7P60409 375 aaPredicted RBP2.41□□□□□ -2.02
CLCC1-205ENST00000369969 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.02
CLCC1-205ENST00000369969 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
CLCC1-205ENST00000369969 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
CLCC1-205ENST00000369969 LCE3CQ5T5A8 94 aa2.36□□□□□ -2.03
CLCC1-205ENST00000369969 KMT2DO14686 5537 aa2.33□□□□□ -2.04
CLCC1-205ENST00000369969 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
CLCC1-205ENST00000369969 USH2AO75445 5202 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms