RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 NDUFAF8A1L188 74 aa7.48□□□□□ -1.21
PHTF1-204ENST00000369604 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
PHTF1-204ENST00000369604 SACSQ9NZJ4 4579 aa7.44□□□□□ -1.22
PHTF1-204ENST00000369604 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
PHTF1-204ENST00000369604 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
PHTF1-204ENST00000369604 S4R3F8 94 aa7.37□□□□□ -1.23
PHTF1-204ENST00000369604 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
PHTF1-204ENST00000369604 RYR3Q15413 4870 aa7.36□□□□□ -1.23
PHTF1-204ENST00000369604 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
PHTF1-204ENST00000369604 LRP1Q07954 4544 aaKnown RBP7.35□□□□□ -1.23
PHTF1-204ENST00000369604 RYR2Q92736 4967 aa7.34□□□□□ -1.23
PHTF1-204ENST00000369604 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
PHTF1-204ENST00000369604 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
PHTF1-204ENST00000369604 A0A0A0MQY5 61 aa7.3□□□□□ -1.24
PHTF1-204ENST00000369604 APOBP04114 4563 aaKnown RBP7.29□□□□□ -1.24
PHTF1-204ENST00000369604 KRTAP10-8P60410 259 aa7.26□□□□□ -1.25
PHTF1-204ENST00000369604 FAT3Q8TDW7 4589 aa7.22□□□□□ -1.25
PHTF1-204ENST00000369604 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
PHTF1-204ENST00000369604 PKHD1L1Q86WI1 4243 aa7.19□□□□□ -1.26
PHTF1-204ENST00000369604 KIAA1109Q2LD37 5005 aa7.18□□□□□ -1.26
PHTF1-204ENST00000369604 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
PHTF1-204ENST00000369604 XP32Q5T750 250 aa7.12□□□□□ -1.27
PHTF1-204ENST00000369604 HSPG2P98160 4391 aa7.11□□□□□ -1.27
PHTF1-204ENST00000369604 EPPK1P58107 5090 aaKnown RBP7.1□□□□□ -1.27
PHTF1-204ENST00000369604 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
PHTF1-204ENST00000369604 M0QZ58 72 aa7.06□□□□□ -1.28
PHTF1-204ENST00000369604 Q5VSD8 79 aa7.05□□□□□ -1.28
PHTF1-204ENST00000369604 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
PHTF1-204ENST00000369604 RYR1P21817 5038 aa6.99□□□□□ -1.29
PHTF1-204ENST00000369604 BIRC6Q9NR09 4857 aa6.95□□□□□ -1.3
PHTF1-204ENST00000369604 LPAP08519 4548 aa6.94□□□□□ -1.3
PHTF1-204ENST00000369604 PLAC4Q8WY50 150 aa6.94□□□□□ -1.3
PHTF1-204ENST00000369604 R4GN34 69 aa6.94□□□□□ -1.3
PHTF1-204ENST00000369604 LRP2P98164 4655 aa6.9□□□□□ -1.3
PHTF1-204ENST00000369604 TNXBP22105 4242 aa6.88□□□□□ -1.31
PHTF1-204ENST00000369604 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
PHTF1-204ENST00000369604 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
PHTF1-204ENST00000369604 KRTAP4-5Q9BYR2 181 aa6.79□□□□□ -1.32
PHTF1-204ENST00000369604 HERC2O95714 4834 aa6.78□□□□□ -1.32
PHTF1-204ENST00000369604 MUC2Q02817 5179 aa6.75□□□□□ -1.33
PHTF1-204ENST00000369604 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
PHTF1-204ENST00000369604 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
PHTF1-204ENST00000369604 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
PHTF1-204ENST00000369604 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
PHTF1-204ENST00000369604 PCLOQ9Y6V0 5065 aa6.58□□□□□ -1.36
PHTF1-204ENST00000369604 J3QL48 77 aa6.56□□□□□ -1.36
PHTF1-204ENST00000369604 HERC1Q15751 4861 aa6.49□□□□□ -1.37
PHTF1-204ENST00000369604 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.38
PHTF1-204ENST00000369604 RNF213Q63HN8 5207 aa6.4□□□□□ -1.38
PHTF1-204ENST00000369604 TNP1P09430 55 aa6.39□□□□□ -1.39
PHTF1-204ENST00000369604 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
PHTF1-204ENST00000369604 KRTAP4-1Q9BYQ7 146 aa6.34□□□□□ -1.39
PHTF1-204ENST00000369604 MUC17Q685J3 4493 aa6.29□□□□□ -1.4
PHTF1-204ENST00000369604 UBR4Q5T4S7 5183 aa6.2□□□□□ -1.42
PHTF1-204ENST00000369604 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
PHTF1-204ENST00000369604 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
PHTF1-204ENST00000369604 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
PHTF1-204ENST00000369604 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
PHTF1-204ENST00000369604 M0R2T5 61 aa6.03□□□□□ -1.44
PHTF1-204ENST00000369604 LCE2DQ5TA82 110 aaPredicted RBP6.03□□□□□ -1.44
PHTF1-204ENST00000369604 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
PHTF1-204ENST00000369604 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
PHTF1-204ENST00000369604 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
PHTF1-204ENST00000369604 INE1O15225 51 aa5.85□□□□□ -1.47
PHTF1-204ENST00000369604 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
PHTF1-204ENST00000369604 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
PHTF1-204ENST00000369604 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
PHTF1-204ENST00000369604 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
PHTF1-204ENST00000369604 USH2AO75445 5202 aa5.71□□□□□ -1.5
PHTF1-204ENST00000369604 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
PHTF1-204ENST00000369604 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
PHTF1-204ENST00000369604 FSIP2Q5CZC0 6907 aa5.64□□□□□ -1.51
PHTF1-204ENST00000369604 MT1HP80294 61 aa5.62□□□□□ -1.51
PHTF1-204ENST00000369604 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
PHTF1-204ENST00000369604 MT1FP04733 61 aa5.59□□□□□ -1.51
PHTF1-204ENST00000369604 MT2AP02795 61 aa5.56□□□□□ -1.52
PHTF1-204ENST00000369604 KMT2DO14686 5537 aa5.55□□□□□ -1.52
PHTF1-204ENST00000369604 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
PHTF1-204ENST00000369604 MT1XP80297 61 aa5.52□□□□□ -1.53
PHTF1-204ENST00000369604 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
PHTF1-204ENST00000369604 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
PHTF1-204ENST00000369604 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
PHTF1-204ENST00000369604 MT1BP07438 61 aa5.45□□□□□ -1.54
PHTF1-204ENST00000369604 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
PHTF1-204ENST00000369604 LCE2BO14633 110 aa5.41□□□□□ -1.54
PHTF1-204ENST00000369604 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
PHTF1-204ENST00000369604 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
PHTF1-204ENST00000369604 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
PHTF1-204ENST00000369604 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.58
PHTF1-204ENST00000369604 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
PHTF1-204ENST00000369604 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
PHTF1-204ENST00000369604 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
PHTF1-204ENST00000369604 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
PHTF1-204ENST00000369604 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
PHTF1-204ENST00000369604 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
PHTF1-204ENST00000369604 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
PHTF1-204ENST00000369604 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
PHTF1-204ENST00000369604 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
PHTF1-204ENST00000369604 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
PHTF1-204ENST00000369604 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms