RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 RYR3Q15413 4870 aa4.17□□□□□ -1.74
BRCC3-203ENST00000369459 SMR3BP02814 79 aaPredicted RBP4.16□□□□□ -1.74
BRCC3-203ENST00000369459 VPS13BQ7Z7G8 4022 aa4.16□□□□□ -1.74
BRCC3-203ENST00000369459 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
BRCC3-203ENST00000369459 Q5VSD8 79 aa4.15□□□□□ -1.75
BRCC3-203ENST00000369459 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
BRCC3-203ENST00000369459 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
BRCC3-203ENST00000369459 TYMSOSQ8TAI1 123 aa4.13□□□□□ -1.75
BRCC3-203ENST00000369459 SPINK1P00995 79 aa4.12□□□□□ -1.75
BRCC3-203ENST00000369459 TPRXLQ17RH7 258 aa4.12□□□□□ -1.75
BRCC3-203ENST00000369459 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
BRCC3-203ENST00000369459 R4GN34 69 aa4.12□□□□□ -1.75
BRCC3-203ENST00000369459 FLG2Q5D862 2391 aaPredicted RBP4.12□□□□□ -1.75
BRCC3-203ENST00000369459 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
BRCC3-203ENST00000369459 HSPG2P98160 4391 aa4.1□□□□□ -1.75
BRCC3-203ENST00000369459 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
BRCC3-203ENST00000369459 RYR1P21817 5038 aa4.09□□□□□ -1.75
BRCC3-203ENST00000369459 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
BRCC3-203ENST00000369459 H0YAA0 97 aa4.05□□□□□ -1.76
BRCC3-203ENST00000369459 HERC2O95714 4834 aa4.04□□□□□ -1.76
BRCC3-203ENST00000369459 FAT1Q14517 4588 aa4.03□□□□□ -1.76
BRCC3-203ENST00000369459 EPPK1P58107 5090 aaKnown RBP4.01□□□□□ -1.77
BRCC3-203ENST00000369459 MMP24-AS1A0A0U1RRL7 71 aa4□□□□□ -1.77
BRCC3-203ENST00000369459 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
BRCC3-203ENST00000369459 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
BRCC3-203ENST00000369459 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
BRCC3-203ENST00000369459 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
BRCC3-203ENST00000369459 TNXBP22105 4242 aa3.97□□□□□ -1.77
BRCC3-203ENST00000369459 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
BRCC3-203ENST00000369459 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
BRCC3-203ENST00000369459 MRPL34Q9BQ48 92 aaKnown RBP3.95□□□□□ -1.78
BRCC3-203ENST00000369459 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
BRCC3-203ENST00000369459 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
BRCC3-203ENST00000369459 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
BRCC3-203ENST00000369459 PCLOQ9Y6V0 5065 aa3.88□□□□□ -1.79
BRCC3-203ENST00000369459 LRP1Q07954 4544 aaKnown RBP3.88□□□□□ -1.79
BRCC3-203ENST00000369459 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
BRCC3-203ENST00000369459 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
BRCC3-203ENST00000369459 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
BRCC3-203ENST00000369459 C9orf92A6NGG3 77 aa3.81□□□□□ -1.8
BRCC3-203ENST00000369459 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
BRCC3-203ENST00000369459 DMBT1Q9UGM3 2413 aaPredicted RBP3.8□□□□□ -1.8
BRCC3-203ENST00000369459 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
BRCC3-203ENST00000369459 IGKV2-30P06310 120 aa3.79□□□□□ -1.8
BRCC3-203ENST00000369459 INE1O15225 51 aa3.79□□□□□ -1.8
BRCC3-203ENST00000369459 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
BRCC3-203ENST00000369459 IGKV2D-30A0A075B6S6 120 aa3.73□□□□□ -1.81
BRCC3-203ENST00000369459 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
BRCC3-203ENST00000369459 COX6B2Q6YFQ2 88 aa3.7□□□□□ -1.82
BRCC3-203ENST00000369459 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
BRCC3-203ENST00000369459 HERC1Q15751 4861 aa3.67□□□□□ -1.82
BRCC3-203ENST00000369459 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
BRCC3-203ENST00000369459 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
BRCC3-203ENST00000369459 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
BRCC3-203ENST00000369459 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
BRCC3-203ENST00000369459 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
BRCC3-203ENST00000369459 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
BRCC3-203ENST00000369459 LPAP08519 4548 aa3.59□□□□□ -1.83
BRCC3-203ENST00000369459 LRP2P98164 4655 aa3.58□□□□□ -1.84
BRCC3-203ENST00000369459 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
BRCC3-203ENST00000369459 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
BRCC3-203ENST00000369459 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
BRCC3-203ENST00000369459 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
BRCC3-203ENST00000369459 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
BRCC3-203ENST00000369459 S4R3F8 94 aa3.52□□□□□ -1.85
BRCC3-203ENST00000369459 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
BRCC3-203ENST00000369459 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
BRCC3-203ENST00000369459 A0A0D9SG42 100 aa3.51□□□□□ -1.85
BRCC3-203ENST00000369459 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
BRCC3-203ENST00000369459 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
BRCC3-203ENST00000369459 MUC2Q02817 5179 aa3.49□□□□□ -1.85
BRCC3-203ENST00000369459 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
BRCC3-203ENST00000369459 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
BRCC3-203ENST00000369459 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
BRCC3-203ENST00000369459 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.86
BRCC3-203ENST00000369459 LCE3BQ5TA77 95 aa3.4□□□□□ -1.87
BRCC3-203ENST00000369459 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
BRCC3-203ENST00000369459 MT1HP80294 61 aa3.36□□□□□ -1.87
BRCC3-203ENST00000369459 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
BRCC3-203ENST00000369459 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
BRCC3-203ENST00000369459 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
BRCC3-203ENST00000369459 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
BRCC3-203ENST00000369459 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
BRCC3-203ENST00000369459 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
BRCC3-203ENST00000369459 M0QZ58 72 aa3.3□□□□□ -1.88
BRCC3-203ENST00000369459 FAT4Q6V0I7 4981 aa3.3□□□□□ -1.88
BRCC3-203ENST00000369459 M0R2T5 61 aa3.28□□□□□ -1.88
BRCC3-203ENST00000369459 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
BRCC3-203ENST00000369459 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
BRCC3-203ENST00000369459 MT2AP02795 61 aa3.22□□□□□ -1.89
BRCC3-203ENST00000369459 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
BRCC3-203ENST00000369459 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
BRCC3-203ENST00000369459 SPRR2GQ9BYE4 73 aa3.2□□□□□ -1.9
BRCC3-203ENST00000369459 MT1FP04733 61 aa3.18□□□□□ -1.9
BRCC3-203ENST00000369459 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
BRCC3-203ENST00000369459 FSIP2Q5CZC0 6907 aa3.15□□□□□ -1.91
BRCC3-203ENST00000369459 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
BRCC3-203ENST00000369459 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
BRCC3-203ENST00000369459 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
BRCC3-203ENST00000369459 MT1BP07438 61 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms