RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
LINC01561-201ENST00000369071 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
LINC01561-201ENST00000369071 A0A1B0GVY2 172 aa6.58□□□□□ -1.36
LINC01561-201ENST00000369071 FAT3Q8TDW7 4589 aa6.51□□□□□ -1.37
LINC01561-201ENST00000369071 K7ERS5 55 aa6.51□□□□□ -1.37
LINC01561-201ENST00000369071 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
LINC01561-201ENST00000369071 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
LINC01561-201ENST00000369071 FLG2Q5D862 2391 aaPredicted RBP6.49□□□□□ -1.37
LINC01561-201ENST00000369071 KIAA1109Q2LD37 5005 aa6.48□□□□□ -1.37
LINC01561-201ENST00000369071 TNXBP22105 4242 aa6.46□□□□□ -1.38
LINC01561-201ENST00000369071 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
LINC01561-201ENST00000369071 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
LINC01561-201ENST00000369071 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
LINC01561-201ENST00000369071 ABCA13Q86UQ4 5058 aa6.43□□□□□ -1.38
LINC01561-201ENST00000369071 ROMO1P60602 79 aa6.43□□□□□ -1.38
LINC01561-201ENST00000369071 RPL37P61927 97 aaKnown RBP6.42□□□□□ -1.38
LINC01561-201ENST00000369071 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
LINC01561-201ENST00000369071 HSPG2P98160 4391 aa6.41□□□□□ -1.38
LINC01561-201ENST00000369071 KRTAP10-8P60410 259 aa6.41□□□□□ -1.38
LINC01561-201ENST00000369071 S4R3F8 94 aa6.38□□□□□ -1.39
LINC01561-201ENST00000369071 A0A0D9SG42 100 aa6.37□□□□□ -1.39
LINC01561-201ENST00000369071 XP32Q5T750 250 aa6.37□□□□□ -1.39
LINC01561-201ENST00000369071 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
LINC01561-201ENST00000369071 P0C880 135 aa6.33□□□□□ -1.4
LINC01561-201ENST00000369071 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
LINC01561-201ENST00000369071 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
LINC01561-201ENST00000369071 HERC1Q15751 4861 aa6.3□□□□□ -1.4
LINC01561-201ENST00000369071 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
LINC01561-201ENST00000369071 Q5VSD8 79 aa6.27□□□□□ -1.41
LINC01561-201ENST00000369071 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
LINC01561-201ENST00000369071 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
LINC01561-201ENST00000369071 J3QL48 77 aa6.23□□□□□ -1.41
LINC01561-201ENST00000369071 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.41
LINC01561-201ENST00000369071 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
LINC01561-201ENST00000369071 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
LINC01561-201ENST00000369071 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.43
LINC01561-201ENST00000369071 SPINT4Q6UDR6 99 aa6.15□□□□□ -1.43
LINC01561-201ENST00000369071 LPAP08519 4548 aa6.14□□□□□ -1.43
LINC01561-201ENST00000369071 M0QZ58 72 aa6.11□□□□□ -1.43
LINC01561-201ENST00000369071 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
LINC01561-201ENST00000369071 LRP2P98164 4655 aa6.06□□□□□ -1.44
LINC01561-201ENST00000369071 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
LINC01561-201ENST00000369071 R4GN34 69 aa5.91□□□□□ -1.46
LINC01561-201ENST00000369071 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
LINC01561-201ENST00000369071 HMCN2Q8NDA2 5059 aa5.86□□□□□ -1.47
LINC01561-201ENST00000369071 LORP23490 312 aaPredicted RBP5.86□□□□□ -1.47
LINC01561-201ENST00000369071 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
LINC01561-201ENST00000369071 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
LINC01561-201ENST00000369071 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
LINC01561-201ENST00000369071 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
LINC01561-201ENST00000369071 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
LINC01561-201ENST00000369071 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
LINC01561-201ENST00000369071 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
LINC01561-201ENST00000369071 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
LINC01561-201ENST00000369071 CAMK2N1Q7Z7J9 78 aa5.62□□□□□ -1.51
LINC01561-201ENST00000369071 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
LINC01561-201ENST00000369071 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
LINC01561-201ENST00000369071 MUC2Q02817 5179 aa5.46□□□□□ -1.54
LINC01561-201ENST00000369071 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
LINC01561-201ENST00000369071 TNP1P09430 55 aa5.45□□□□□ -1.54
LINC01561-201ENST00000369071 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
LINC01561-201ENST00000369071 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
LINC01561-201ENST00000369071 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
LINC01561-201ENST00000369071 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
LINC01561-201ENST00000369071 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
LINC01561-201ENST00000369071 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
LINC01561-201ENST00000369071 LCE2DQ5TA82 110 aaPredicted RBP5.22□□□□□ -1.57
LINC01561-201ENST00000369071 FSIP2Q5CZC0 6907 aa5.2□□□□□ -1.58
LINC01561-201ENST00000369071 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
LINC01561-201ENST00000369071 MT1HP80294 61 aa5.13□□□□□ -1.59
LINC01561-201ENST00000369071 M0R2T5 61 aa5.12□□□□□ -1.59
LINC01561-201ENST00000369071 MT1FP04733 61 aa5.11□□□□□ -1.59
LINC01561-201ENST00000369071 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
LINC01561-201ENST00000369071 MT2AP02795 61 aa5.09□□□□□ -1.59
LINC01561-201ENST00000369071 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
LINC01561-201ENST00000369071 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
LINC01561-201ENST00000369071 KRTAP19-8Q3LI54 63 aa5.05□□□□□ -1.6
LINC01561-201ENST00000369071 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
LINC01561-201ENST00000369071 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
LINC01561-201ENST00000369071 MT1BP07438 61 aa4.98□□□□□ -1.61
LINC01561-201ENST00000369071 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
LINC01561-201ENST00000369071 MT1XP80297 61 aa4.98□□□□□ -1.61
LINC01561-201ENST00000369071 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
LINC01561-201ENST00000369071 KRTAP12-3P60328 96 aa4.9□□□□□ -1.62
LINC01561-201ENST00000369071 KRTAP10-12P60413 245 aa4.9□□□□□ -1.62
LINC01561-201ENST00000369071 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
LINC01561-201ENST00000369071 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
LINC01561-201ENST00000369071 INE1O15225 51 aa4.79□□□□□ -1.64
LINC01561-201ENST00000369071 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
LINC01561-201ENST00000369071 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
LINC01561-201ENST00000369071 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
LINC01561-201ENST00000369071 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
LINC01561-201ENST00000369071 LCE2BO14633 110 aa4.61□□□□□ -1.67
LINC01561-201ENST00000369071 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
LINC01561-201ENST00000369071 USH2AO75445 5202 aa4.58□□□□□ -1.68
LINC01561-201ENST00000369071 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
LINC01561-201ENST00000369071 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
LINC01561-201ENST00000369071 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
LINC01561-201ENST00000369071 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
LINC01561-201ENST00000369071 KMT2DO14686 5537 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms