RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 RYR1P21817 5038 aa9.44□□□□□ -0.9
UBQLN4-201ENST00000368309 A0A1B0GU33 70 aa9.43□□□□□ -0.9
UBQLN4-201ENST00000368309 KIAA1109Q2LD37 5005 aa9.41□□□□□ -0.9
UBQLN4-201ENST00000368309 RPL37P61927 97 aaKnown RBP9.38□□□□□ -0.91
UBQLN4-201ENST00000368309 XP32Q5T750 250 aa9.38□□□□□ -0.91
UBQLN4-201ENST00000368309 H1FX-AS1Q4G0G2 97 aa9.37□□□□□ -0.91
UBQLN4-201ENST00000368309 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
UBQLN4-201ENST00000368309 KRTAP3-3Q9BYR6 98 aa9.27□□□□□ -0.93
UBQLN4-201ENST00000368309 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
UBQLN4-201ENST00000368309 LPAP08519 4548 aa9.21□□□□□ -0.94
UBQLN4-201ENST00000368309 EPPK1P58107 5090 aaKnown RBP9.18□□□□□ -0.94
UBQLN4-201ENST00000368309 S4R3F8 94 aa9.18□□□□□ -0.94
UBQLN4-201ENST00000368309 LRP2P98164 4655 aa9.17□□□□□ -0.94
UBQLN4-201ENST00000368309 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
UBQLN4-201ENST00000368309 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
UBQLN4-201ENST00000368309 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
UBQLN4-201ENST00000368309 A0A0D9SG42 100 aa9.08□□□□□ -0.96
UBQLN4-201ENST00000368309 LINC01554Q52M75 96 aa9.08□□□□□ -0.96
UBQLN4-201ENST00000368309 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
UBQLN4-201ENST00000368309 K7ERS5 55 aa9.06□□□□□ -0.96
UBQLN4-201ENST00000368309 P0C880 135 aa9.05□□□□□ -0.96
UBQLN4-201ENST00000368309 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
UBQLN4-201ENST00000368309 TPRXLQ17RH7 258 aa9□□□□□ -0.97
UBQLN4-201ENST00000368309 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
UBQLN4-201ENST00000368309 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
UBQLN4-201ENST00000368309 ROMO1P60602 79 aa8.85□□□□□ -0.99
UBQLN4-201ENST00000368309 KRTAP12-2P59991 146 aa8.79□□□□□ -1
UBQLN4-201ENST00000368309 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
UBQLN4-201ENST00000368309 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
UBQLN4-201ENST00000368309 J3QL48 77 aa8.68□□□□□ -1.02
UBQLN4-201ENST00000368309 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
UBQLN4-201ENST00000368309 HERC2O95714 4834 aa8.68□□□□□ -1.02
UBQLN4-201ENST00000368309 KRTAP4-1Q9BYQ7 146 aa8.66□□□□□ -1.02
UBQLN4-201ENST00000368309 M0QZ58 72 aa8.66□□□□□ -1.02
UBQLN4-201ENST00000368309 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
UBQLN4-201ENST00000368309 C10orf95Q9H7T3 257 aa8.64□□□□□ -1.03
UBQLN4-201ENST00000368309 MUC2Q02817 5179 aa8.56□□□□□ -1.04
UBQLN4-201ENST00000368309 R4GN34 69 aa8.55□□□□□ -1.04
UBQLN4-201ENST00000368309 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
UBQLN4-201ENST00000368309 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
UBQLN4-201ENST00000368309 BIRC6Q9NR09 4857 aa8.34□□□□□ -1.07
UBQLN4-201ENST00000368309 HERC1Q15751 4861 aa8.33□□□□□ -1.08
UBQLN4-201ENST00000368309 H3BS24 57 aa8.28□□□□□ -1.08
UBQLN4-201ENST00000368309 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
UBQLN4-201ENST00000368309 FLGP20930 4061 aaPredicted RBP8.24□□□□□ -1.09
UBQLN4-201ENST00000368309 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
UBQLN4-201ENST00000368309 FAT4Q6V0I7 4981 aa8.12□□□□□ -1.11
UBQLN4-201ENST00000368309 CAMK2N1Q7Z7J9 78 aa8.12□□□□□ -1.11
UBQLN4-201ENST00000368309 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
UBQLN4-201ENST00000368309 LCE2CQ5TA81 110 aa7.97□□□□□ -1.13
UBQLN4-201ENST00000368309 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
UBQLN4-201ENST00000368309 NDUFAF8A1L188 74 aa7.94□□□□□ -1.14
UBQLN4-201ENST00000368309 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
UBQLN4-201ENST00000368309 M0R2T5 61 aa7.87□□□□□ -1.15
UBQLN4-201ENST00000368309 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
UBQLN4-201ENST00000368309 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
UBQLN4-201ENST00000368309 MT1HP80294 61 aa7.76□□□□□ -1.17
UBQLN4-201ENST00000368309 TNP1P09430 55 aa7.76□□□□□ -1.17
UBQLN4-201ENST00000368309 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
UBQLN4-201ENST00000368309 SPRR2GQ9BYE4 73 aa7.74□□□□□ -1.17
UBQLN4-201ENST00000368309 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
UBQLN4-201ENST00000368309 MT1FP04733 61 aa7.65□□□□□ -1.19
UBQLN4-201ENST00000368309 MT2AP02795 61 aa7.63□□□□□ -1.19
UBQLN4-201ENST00000368309 KRTAP9-8Q9BYQ0 159 aa7.58□□□□□ -1.2
UBQLN4-201ENST00000368309 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
UBQLN4-201ENST00000368309 LUZP6Q538Z0 58 aa7.44□□□□□ -1.22
UBQLN4-201ENST00000368309 LCE3AQ5TA76 89 aa7.4□□□□□ -1.23
UBQLN4-201ENST00000368309 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
UBQLN4-201ENST00000368309 MT1BP07438 61 aa7.35□□□□□ -1.23
UBQLN4-201ENST00000368309 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
UBQLN4-201ENST00000368309 MT1XP80297 61 aa7.28□□□□□ -1.24
UBQLN4-201ENST00000368309 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
UBQLN4-201ENST00000368309 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
UBQLN4-201ENST00000368309 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
UBQLN4-201ENST00000368309 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.27
UBQLN4-201ENST00000368309 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
UBQLN4-201ENST00000368309 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
UBQLN4-201ENST00000368309 USH2AO75445 5202 aa7.09□□□□□ -1.27
UBQLN4-201ENST00000368309 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
UBQLN4-201ENST00000368309 LCE2BO14633 110 aa7.02□□□□□ -1.29
UBQLN4-201ENST00000368309 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
UBQLN4-201ENST00000368309 KMT2DO14686 5537 aa6.91□□□□□ -1.3
UBQLN4-201ENST00000368309 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
UBQLN4-201ENST00000368309 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
UBQLN4-201ENST00000368309 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
UBQLN4-201ENST00000368309 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
UBQLN4-201ENST00000368309 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
UBQLN4-201ENST00000368309 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
UBQLN4-201ENST00000368309 KRTAP19-7Q3SYF9 63 aa6.49□□□□□ -1.37
UBQLN4-201ENST00000368309 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
UBQLN4-201ENST00000368309 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
UBQLN4-201ENST00000368309 KRTAP9-6A8MVA2 160 aa6.41□□□□□ -1.38
UBQLN4-201ENST00000368309 MT1EP04732 61 aa6.29□□□□□ -1.4
UBQLN4-201ENST00000368309 MT1LQ93083 61 aa6.29□□□□□ -1.4
UBQLN4-201ENST00000368309 INE1O15225 51 aa6.26□□□□□ -1.41
UBQLN4-201ENST00000368309 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
UBQLN4-201ENST00000368309 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
UBQLN4-201ENST00000368309 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
UBQLN4-201ENST00000368309 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
UBQLN4-201ENST00000368309 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms