RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
TNFRSF1A-202ENST00000366159 FAM236AA0A1B0GUQ0 79 aa6.14□□□□□ -1.43
TNFRSF1A-202ENST00000366159 FAM236BA0A1B0GV22 79 aa6.14□□□□□ -1.43
TNFRSF1A-202ENST00000366159 CYP4F30PQ9H0H9 118 aa6.14□□□□□ -1.43
TNFRSF1A-202ENST00000366159 Q5VV11 94 aa6.1□□□□□ -1.43
TNFRSF1A-202ENST00000366159 A0A087WVE0 104 aa6.09□□□□□ -1.43
TNFRSF1A-202ENST00000366159 KLKP1Q107X0 134 aa6.09□□□□□ -1.43
TNFRSF1A-202ENST00000366159 LCE4AQ5TA78 99 aa6.09□□□□□ -1.43
TNFRSF1A-202ENST00000366159 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
TNFRSF1A-202ENST00000366159 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
TNFRSF1A-202ENST00000366159 A6NN06 94 aa6.06□□□□□ -1.44
TNFRSF1A-202ENST00000366159 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
TNFRSF1A-202ENST00000366159 ACYP1P07311 99 aa6.05□□□□□ -1.44
TNFRSF1A-202ENST00000366159 NEBP20929 6669 aa6.05□□□□□ -1.44
TNFRSF1A-202ENST00000366159 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
TNFRSF1A-202ENST00000366159 FAM240AA0A1B0GVK7 77 aa6.03□□□□□ -1.44
TNFRSF1A-202ENST00000366159 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
TNFRSF1A-202ENST00000366159 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
TNFRSF1A-202ENST00000366159 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
TNFRSF1A-202ENST00000366159 UQCRQO14949 82 aa5.99□□□□□ -1.45
TNFRSF1A-202ENST00000366159 J3QR89 54 aa5.98□□□□□ -1.45
TNFRSF1A-202ENST00000366159 H0YAA0 97 aa5.97□□□□□ -1.45
TNFRSF1A-202ENST00000366159 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
TNFRSF1A-202ENST00000366159 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
TNFRSF1A-202ENST00000366159 H0Y9P7 68 aa5.96□□□□□ -1.46
TNFRSF1A-202ENST00000366159 ATOX1O00244 68 aa5.96□□□□□ -1.46
TNFRSF1A-202ENST00000366159 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.46
TNFRSF1A-202ENST00000366159 IMUPQ9GZP8 106 aa5.96□□□□□ -1.46
TNFRSF1A-202ENST00000366159 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
TNFRSF1A-202ENST00000366159 NDUFC1O43677 76 aa5.92□□□□□ -1.46
TNFRSF1A-202ENST00000366159 A8MUN3 132 aa5.9□□□□□ -1.47
TNFRSF1A-202ENST00000366159 KRTAP5-9P26371 169 aa5.9□□□□□ -1.47
TNFRSF1A-202ENST00000366159 LINC00643Q86TS7 51 aa5.9□□□□□ -1.47
TNFRSF1A-202ENST00000366159 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
TNFRSF1A-202ENST00000366159 KMT2DO14686 5537 aa5.89□□□□□ -1.47
TNFRSF1A-202ENST00000366159 MDN1Q9NU22 5596 aa5.87□□□□□ -1.47
TNFRSF1A-202ENST00000366159 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
TNFRSF1A-202ENST00000366159 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
TNFRSF1A-202ENST00000366159 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
TNFRSF1A-202ENST00000366159 ANAPC13Q9BS18 74 aa5.84□□□□□ -1.47
TNFRSF1A-202ENST00000366159 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
TNFRSF1A-202ENST00000366159 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
TNFRSF1A-202ENST00000366159 SEC61GP60059 68 aa5.8□□□□□ -1.48
TNFRSF1A-202ENST00000366159 MP68P56378 58 aa5.79□□□□□ -1.48
TNFRSF1A-202ENST00000366159 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
TNFRSF1A-202ENST00000366159 MT1XP80297 61 aa5.76□□□□□ -1.49
TNFRSF1A-202ENST00000366159 H3BPC8 53 aa5.74□□□□□ -1.49
TNFRSF1A-202ENST00000366159 P0C880 135 aa5.73□□□□□ -1.49
TNFRSF1A-202ENST00000366159 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
TNFRSF1A-202ENST00000366159 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
TNFRSF1A-202ENST00000366159 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
TNFRSF1A-202ENST00000366159 V9GYY9 64 aa5.71□□□□□ -1.5
TNFRSF1A-202ENST00000366159 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
TNFRSF1A-202ENST00000366159 CCDC179H3BU77 68 aa5.69□□□□□ -1.5
TNFRSF1A-202ENST00000366159 MT-ATP8P03928 68 aa5.69□□□□□ -1.5
TNFRSF1A-202ENST00000366159 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
TNFRSF1A-202ENST00000366159 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
TNFRSF1A-202ENST00000366159 R4GN34 69 aa5.69□□□□□ -1.5
TNFRSF1A-202ENST00000366159 C20orf197Q8N268 126 aa5.66□□□□□ -1.5
TNFRSF1A-202ENST00000366159 KRTAP12-2P59991 146 aa5.65□□□□□ -1.51
TNFRSF1A-202ENST00000366159 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
TNFRSF1A-202ENST00000366159 M0QZ58 72 aa5.63□□□□□ -1.51
TNFRSF1A-202ENST00000366159 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
TNFRSF1A-202ENST00000366159 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
TNFRSF1A-202ENST00000366159 TRAV7A0A075B6U4 112 aa5.59□□□□□ -1.51
TNFRSF1A-202ENST00000366159 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
TNFRSF1A-202ENST00000366159 KRTAP2-3P0C7H8 128 aa5.57□□□□□ -1.52
TNFRSF1A-202ENST00000366159 KRTAP2-4Q9BYR9 128 aa5.57□□□□□ -1.52
TNFRSF1A-202ENST00000366159 SPRR2EP22531 72 aa5.56□□□□□ -1.52
TNFRSF1A-202ENST00000366159 SPRR2BP35325 72 aa5.56□□□□□ -1.52
TNFRSF1A-202ENST00000366159 SPRR2AP35326 72 aa5.56□□□□□ -1.52
TNFRSF1A-202ENST00000366159 TMEM258P61165 79 aa5.56□□□□□ -1.52
TNFRSF1A-202ENST00000366159 ACYP2P14621 99 aa5.53□□□□□ -1.52
TNFRSF1A-202ENST00000366159 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
TNFRSF1A-202ENST00000366159 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
TNFRSF1A-202ENST00000366159 LINC01554Q52M75 96 aa5.52□□□□□ -1.53
TNFRSF1A-202ENST00000366159 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
TNFRSF1A-202ENST00000366159 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
TNFRSF1A-202ENST00000366159 COX7CP15954 63 aa5.47□□□□□ -1.53
TNFRSF1A-202ENST00000366159 SPTSSBQ8NFR3 76 aa5.45□□□□□ -1.54
TNFRSF1A-202ENST00000366159 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.55
TNFRSF1A-202ENST00000366159 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.55
TNFRSF1A-202ENST00000366159 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
TNFRSF1A-202ENST00000366159 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
TNFRSF1A-202ENST00000366159 SERP1Q9Y6X1 66 aa5.38□□□□□ -1.55
TNFRSF1A-202ENST00000366159 CHKB-CPT1BH3BT56 60 aa5.37□□□□□ -1.55
TNFRSF1A-202ENST00000366159 SPRR2DP22532 72 aa5.37□□□□□ -1.55
TNFRSF1A-202ENST00000366159 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
TNFRSF1A-202ENST00000366159 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
TNFRSF1A-202ENST00000366159 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
TNFRSF1A-202ENST00000366159 SMIM26A0A096LP01 95 aa5.35□□□□□ -1.55
TNFRSF1A-202ENST00000366159 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
TNFRSF1A-202ENST00000366159 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
TNFRSF1A-202ENST00000366159 ATP5EP56381 51 aaPredicted RBP5.3□□□□□ -1.56
TNFRSF1A-202ENST00000366159 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
TNFRSF1A-202ENST00000366159 CYSTM1Q9H1C7 97 aa5.21□□□□□ -1.58
TNFRSF1A-202ENST00000366159 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
TNFRSF1A-202ENST00000366159 COA5Q86WW8 74 aa5.19□□□□□ -1.58
TNFRSF1A-202ENST00000366159 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
TNFRSF1A-202ENST00000366159 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms