RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 TOMM5Q8N4H5 51 aa-0.21□□□□□ -2.44
RNU6-1249P-201ENST00000363237 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.21□□□□□ -2.44
RNU6-1249P-201ENST00000363237 LAMA1P25391 3075 aa-0.22□□□□□ -2.44
RNU6-1249P-201ENST00000363237 NDUFA1O15239 70 aa-0.22□□□□□ -2.44
RNU6-1249P-201ENST00000363237 COL6A5A8TX70 2615 aa-0.22□□□□□ -2.45
RNU6-1249P-201ENST00000363237 DNAH1Q9P2D7 4330 aa-0.22□□□□□ -2.45
RNU6-1249P-201ENST00000363237 FAT1Q14517 4588 aa-0.23□□□□□ -2.45
RNU6-1249P-201ENST00000363237 UTP20O75691 2785 aaKnown RBP-0.23□□□□□ -2.45
RNU6-1249P-201ENST00000363237 KRTAP8-1Q8IUC2 63 aa-0.23□□□□□ -2.45
RNU6-1249P-201ENST00000363237 PCLOQ9Y6V0 5065 aa-0.23□□□□□ -2.45
RNU6-1249P-201ENST00000363237 MYO18BQ8IUG5 2567 aa-0.24□□□□□ -2.45
RNU6-1249P-201ENST00000363237 KRTAP19-5Q3LI72 72 aa-0.24□□□□□ -2.45
RNU6-1249P-201ENST00000363237 SYNE2Q8WXH0 6885 aaKnown RBP-0.24□□□□□ -2.45
RNU6-1249P-201ENST00000363237 KRTAP19-8Q3LI54 63 aa-0.25□□□□□ -2.45
RNU6-1249P-201ENST00000363237 ATP7AQ04656 1500 aa-0.26□□□□□ -2.45
RNU6-1249P-201ENST00000363237 DNAH7Q8WXX0 4024 aa-0.27□□□□□ -2.45
RNU6-1249P-201ENST00000363237 RIF1Q5UIP0 2472 aaKnown RBP-0.27□□□□□ -2.45
RNU6-1249P-201ENST00000363237 COL12A1Q99715 3063 aa-0.27□□□□□ -2.45
RNU6-1249P-201ENST00000363237 KMT2CQ8NEZ4 4911 aaKnown RBP-0.28□□□□□ -2.45
RNU6-1249P-201ENST00000363237 CCDC168Q8NDH2 2452 aa-0.28□□□□□ -2.45
RNU6-1249P-201ENST00000363237 MGAM2Q2M2H8 2515 aa-0.28□□□□□ -2.45
RNU6-1249P-201ENST00000363237 POLR2KP53803 58 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1249P-201ENST00000363237 DNAH8Q96JB1 4490 aa-0.29□□□□□ -2.46
RNU6-1249P-201ENST00000363237 SPTBN5Q9NRC6 3674 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1249P-201ENST00000363237 CELSR3Q9NYQ7 3312 aa-0.3□□□□□ -2.46
RNU6-1249P-201ENST00000363237 FSIP2Q5CZC0 6907 aa-0.3□□□□□ -2.46
RNU6-1249P-201ENST00000363237 DEFB1P60022 68 aa-0.3□□□□□ -2.46
RNU6-1249P-201ENST00000363237 SMR3BP02814 79 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1249P-201ENST00000363237 TLN2Q9Y4G6 2542 aa-0.31□□□□□ -2.46
RNU6-1249P-201ENST00000363237 STARD9Q9P2P6 4700 aa-0.32□□□□□ -2.46
RNU6-1249P-201ENST00000363237 SPART-AS1P0CW21 52 aa-0.32□□□□□ -2.46
RNU6-1249P-201ENST00000363237 WDR87Q6ZQQ6 2873 aa-0.32□□□□□ -2.46
RNU6-1249P-201ENST00000363237 SAMD9LQ8IVG5 1584 aa-0.32□□□□□ -2.46
RNU6-1249P-201ENST00000363237 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
RNU6-1249P-201ENST00000363237 FRYQ5TBA9 3013 aa-0.34□□□□□ -2.46
RNU6-1249P-201ENST00000363237 MT1HP80294 61 aa-0.34□□□□□ -2.46
RNU6-1249P-201ENST00000363237 MUC12Q9UKN1 5478 aa-0.34□□□□□ -2.46
RNU6-1249P-201ENST00000363237 MUC17Q685J3 4493 aa-0.34□□□□□ -2.46
RNU6-1249P-201ENST00000363237 RELNP78509 3460 aa-0.36□□□□□ -2.47
RNU6-1249P-201ENST00000363237 UBR4Q5T4S7 5183 aa-0.39□□□□□ -2.47
RNU6-1249P-201ENST00000363237 PLECQ15149 4684 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1249P-201ENST00000363237 ITPR1Q14643 2758 aa-0.4□□□□□ -2.47
RNU6-1249P-201ENST00000363237 USP9XQ93008 2570 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1249P-201ENST00000363237 CHD7Q9P2D1 2997 aa-0.42□□□□□ -2.48
RNU6-1249P-201ENST00000363237 TOP2AP11388 1531 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1249P-201ENST00000363237 CMYA5Q8N3K9 4069 aa-0.43□□□□□ -2.48
RNU6-1249P-201ENST00000363237 DNAH10Q8IVF4 4471 aa-0.43□□□□□ -2.48
RNU6-1249P-201ENST00000363237 ITPR3Q14573 2671 aa-0.45□□□□□ -2.48
RNU6-1249P-201ENST00000363237 USP9YO00507 2555 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-1249P-201ENST00000363237 MT4P47944 62 aa-0.48□□□□□ -2.49
RNU6-1249P-201ENST00000363237 ZFHX4Q86UP3 3567 aa-0.48□□□□□ -2.49
RNU6-1249P-201ENST00000363237 C5orf42Q9H799 3197 aa-0.49□□□□□ -2.49
RNU6-1249P-201ENST00000363237 MT1EP04732 61 aa-0.49□□□□□ -2.49
RNU6-1249P-201ENST00000363237 KRTAP20-2Q3LI61 65 aa-0.49□□□□□ -2.49
RNU6-1249P-201ENST00000363237 MGAQ8IWI9 3026 aa-0.49□□□□□ -2.49
RNU6-1249P-201ENST00000363237 USH2AO75445 5202 aa-0.5□□□□□ -2.49
RNU6-1249P-201ENST00000363237 DSTQ03001 7570 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1249P-201ENST00000363237 DYNC1H1Q14204 4646 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1249P-201ENST00000363237 RYR1P21817 5038 aa-0.51□□□□□ -2.49
RNU6-1249P-201ENST00000363237 ADGRG4Q8IZF6 3080 aa-0.51□□□□□ -2.49
RNU6-1249P-201ENST00000363237 DNAH17Q9UFH2 4485 aa-0.52□□□□□ -2.49
RNU6-1249P-201ENST00000363237 LEAP2Q969E1 77 aa-0.52□□□□□ -2.49
RNU6-1249P-201ENST00000363237 CSMD1Q96PZ7 3565 aa-0.52□□□□□ -2.49
RNU6-1249P-201ENST00000363237 SRCAPQ6ZRS2 3230 aa-0.53□□□□□ -2.49
RNU6-1249P-201ENST00000363237 MT1XP80297 61 aa-0.54□□□□□ -2.5
RNU6-1249P-201ENST00000363237 MROH2BQ7Z745 1585 aa-0.54□□□□□ -2.5
RNU6-1249P-201ENST00000363237 SPTAN1Q13813 2472 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1249P-201ENST00000363237 MACF1Q9UPN3 7388 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1249P-201ENST00000363237 LAMA3Q16787 3333 aa-0.56□□□□□ -2.5
RNU6-1249P-201ENST00000363237 DNHD1Q96M86 4753 aa-0.56□□□□□ -2.5
RNU6-1249P-201ENST00000363237 MT1LQ93083 61 aa-0.56□□□□□ -2.5
RNU6-1249P-201ENST00000363237 TOMM7Q9P0U1 55 aa-0.56□□□□□ -2.5
RNU6-1249P-201ENST00000363237 HERC2O95714 4834 aa-0.57□□□□□ -2.5
RNU6-1249P-201ENST00000363237 RPL39P62891 51 aaKnown RBP-0.57□□□□□ -2.5
RNU6-1249P-201ENST00000363237 CRYBG3Q68DQ2 2970 aa-0.57□□□□□ -2.5
RNU6-1249P-201ENST00000363237 DUOX1Q9NRD9 1551 aa-0.58□□□□□ -2.5
RNU6-1249P-201ENST00000363237 TRRAPQ9Y4A5 3859 aa-0.59□□□□□ -2.5
RNU6-1249P-201ENST00000363237 TEX15Q9BXT5 2789 aa-0.61□□□□□ -2.51
RNU6-1249P-201ENST00000363237 DEFB136Q30KP8 78 aa-0.62□□□□□ -2.51
RNU6-1249P-201ENST00000363237 LRBAP50851 2863 aa-0.63□□□□□ -2.51
RNU6-1249P-201ENST00000363237 GCC2Q8IWJ2 1684 aa-0.63□□□□□ -2.51
RNU6-1249P-201ENST00000363237 EPPK1P58107 5090 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1249P-201ENST00000363237 DMXL2Q8TDJ6 3036 aa-0.64□□□□□ -2.51
RNU6-1249P-201ENST00000363237 LINC01590Q5TEZ4 76 aa-0.65□□□□□ -2.51
RNU6-1249P-201ENST00000363237 LAMA2P24043 3122 aaKnown RBP-0.66□□□□□ -2.51
RNU6-1249P-201ENST00000363237 RPL39LQ96EH5 51 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1249P-201ENST00000363237 EYSQ5T1H1 3165 aa-0.69□□□□□ -2.52
RNU6-1249P-201ENST00000363237 MYO9AB2RTY4 2548 aa-0.69□□□□□ -2.52
RNU6-1249P-201ENST00000363237 DOPEY1Q5JWR5 2465 aa-0.7□□□□□ -2.52
RNU6-1249P-201ENST00000363237 NIPBLQ6KC79 2804 aaeCLIP-0.71□□□□□ -2.52
RNU6-1249P-201ENST00000363237 BIRC6Q9NR09 4857 aa-0.71□□□□□ -2.52
RNU6-1249P-201ENST00000363237 CFAP46Q8IYW2 2715 aa-0.71□□□□□ -2.52
RNU6-1249P-201ENST00000363237 DNAH5Q8TE73 4624 aa-0.72□□□□□ -2.52
RNU6-1249P-201ENST00000363237 SNRPGP62308 76 aaKnown RBP-0.72□□□□□ -2.52
RNU6-1249P-201ENST00000363237 RNF213Q63HN8 5207 aa-0.75□□□□□ -2.53
RNU6-1249P-201ENST00000363237 DEFB4AO15263 64 aa-0.76□□□□□ -2.53
RNU6-1249P-201ENST00000363237 SMG1Q96Q15 3661 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1249P-201ENST00000363237 CSMD2Q7Z408 3487 aa-0.77□□□□□ -2.53
RNU6-1249P-201ENST00000363237 MT1HL1P0DM35 61 aa-0.77□□□□□ -2.53
RNU6-1249P-201ENST00000363237 CFAP54Q96N23 3096 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms