RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
CALD1-202ENST00000361901 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
CALD1-202ENST00000361901 KRTAP10-4P60372 401 aaPredicted RBP4.94□□□□□ -1.62
CALD1-202ENST00000361901 FAT2Q9NYQ8 4349 aa4.93□□□□□ -1.62
CALD1-202ENST00000361901 RYR2Q92736 4967 aa4.92□□□□□ -1.62
CALD1-202ENST00000361901 KRTAP13-3Q3SY46 172 aa4.92□□□□□ -1.62
CALD1-202ENST00000361901 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
CALD1-202ENST00000361901 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
CALD1-202ENST00000361901 APOBP04114 4563 aaKnown RBP4.91□□□□□ -1.62
CALD1-202ENST00000361901 RYR3Q15413 4870 aa4.91□□□□□ -1.62
CALD1-202ENST00000361901 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
CALD1-202ENST00000361901 KRTAP4-5Q9BYR2 181 aa4.89□□□□□ -1.63
CALD1-202ENST00000361901 PKD1P98161 4303 aa4.88□□□□□ -1.63
CALD1-202ENST00000361901 LRP1Q07954 4544 aaKnown RBP4.88□□□□□ -1.63
CALD1-202ENST00000361901 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
CALD1-202ENST00000361901 RYR1P21817 5038 aa4.86□□□□□ -1.63
CALD1-202ENST00000361901 XP32Q5T750 250 aa4.86□□□□□ -1.63
CALD1-202ENST00000361901 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
CALD1-202ENST00000361901 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
CALD1-202ENST00000361901 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
CALD1-202ENST00000361901 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
CALD1-202ENST00000361901 FAT3Q8TDW7 4589 aa4.78□□□□□ -1.64
CALD1-202ENST00000361901 S4R3F8 94 aa4.76□□□□□ -1.65
CALD1-202ENST00000361901 EPPK1P58107 5090 aaKnown RBP4.73□□□□□ -1.65
CALD1-202ENST00000361901 HSPG2P98160 4391 aa4.71□□□□□ -1.65
CALD1-202ENST00000361901 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
CALD1-202ENST00000361901 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
CALD1-202ENST00000361901 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.66
CALD1-202ENST00000361901 M0R2T5 61 aa4.64□□□□□ -1.67
CALD1-202ENST00000361901 HERC2O95714 4834 aa4.61□□□□□ -1.67
CALD1-202ENST00000361901 LRP2P98164 4655 aa4.58□□□□□ -1.68
CALD1-202ENST00000361901 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
CALD1-202ENST00000361901 R4GN34 69 aa4.55□□□□□ -1.68
CALD1-202ENST00000361901 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
CALD1-202ENST00000361901 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
CALD1-202ENST00000361901 M0QZ58 72 aa4.53□□□□□ -1.68
CALD1-202ENST00000361901 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
CALD1-202ENST00000361901 LPAP08519 4548 aa4.51□□□□□ -1.69
CALD1-202ENST00000361901 TNXBP22105 4242 aa4.49□□□□□ -1.69
CALD1-202ENST00000361901 BIRC6Q9NR09 4857 aa4.47□□□□□ -1.69
CALD1-202ENST00000361901 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
CALD1-202ENST00000361901 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
CALD1-202ENST00000361901 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
CALD1-202ENST00000361901 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
CALD1-202ENST00000361901 HERC1Q15751 4861 aa4.38□□□□□ -1.71
CALD1-202ENST00000361901 KRTAP3-2Q9BYR7 98 aa4.33□□□□□ -1.72
CALD1-202ENST00000361901 MUC2Q02817 5179 aa4.32□□□□□ -1.72
CALD1-202ENST00000361901 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
CALD1-202ENST00000361901 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
CALD1-202ENST00000361901 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
CALD1-202ENST00000361901 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
CALD1-202ENST00000361901 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
CALD1-202ENST00000361901 LORP23490 312 aaPredicted RBP4.24□□□□□ -1.73
CALD1-202ENST00000361901 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
CALD1-202ENST00000361901 TNP1P09430 55 aa4.16□□□□□ -1.74
CALD1-202ENST00000361901 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
CALD1-202ENST00000361901 INE1O15225 51 aa4.12□□□□□ -1.75
CALD1-202ENST00000361901 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
CALD1-202ENST00000361901 MT1HP80294 61 aa4.06□□□□□ -1.76
CALD1-202ENST00000361901 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
CALD1-202ENST00000361901 KRTAP19-2Q3LHN2 52 aa4.01□□□□□ -1.77
CALD1-202ENST00000361901 LCE2CQ5TA81 110 aa4□□□□□ -1.77
CALD1-202ENST00000361901 FLGP20930 4061 aaPredicted RBP3.98□□□□□ -1.77
CALD1-202ENST00000361901 MT2AP02795 61 aa3.96□□□□□ -1.78
CALD1-202ENST00000361901 MT1FP04733 61 aa3.95□□□□□ -1.78
CALD1-202ENST00000361901 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
CALD1-202ENST00000361901 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
CALD1-202ENST00000361901 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
CALD1-202ENST00000361901 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
CALD1-202ENST00000361901 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
CALD1-202ENST00000361901 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
CALD1-202ENST00000361901 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
CALD1-202ENST00000361901 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
CALD1-202ENST00000361901 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
CALD1-202ENST00000361901 USH2AO75445 5202 aa3.69□□□□□ -1.82
CALD1-202ENST00000361901 MT1BP07438 61 aa3.68□□□□□ -1.82
CALD1-202ENST00000361901 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.82
CALD1-202ENST00000361901 LCE2BO14633 110 aa3.63□□□□□ -1.83
CALD1-202ENST00000361901 MT1XP80297 61 aa3.62□□□□□ -1.83
CALD1-202ENST00000361901 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
CALD1-202ENST00000361901 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
CALD1-202ENST00000361901 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
CALD1-202ENST00000361901 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
CALD1-202ENST00000361901 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
CALD1-202ENST00000361901 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
CALD1-202ENST00000361901 KMT2DO14686 5537 aa3.49□□□□□ -1.85
CALD1-202ENST00000361901 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
CALD1-202ENST00000361901 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
CALD1-202ENST00000361901 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
CALD1-202ENST00000361901 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
CALD1-202ENST00000361901 LCE2DQ5TA82 110 aaPredicted RBP3.35□□□□□ -1.87
CALD1-202ENST00000361901 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
CALD1-202ENST00000361901 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
CALD1-202ENST00000361901 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
CALD1-202ENST00000361901 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
CALD1-202ENST00000361901 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
CALD1-202ENST00000361901 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
CALD1-202ENST00000361901 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
CALD1-202ENST00000361901 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
CALD1-202ENST00000361901 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms