RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 H0YAA0 97 aa13.63□□□□□ -0.23
CUEDC1-201ENST00000360238 H1FX-AS1Q4G0G2 97 aa13.61□□□□□ -0.23
CUEDC1-201ENST00000360238 RBM12B-AS1Q9P1G2 102 aa13.59□□□□□ -0.23
CUEDC1-201ENST00000360238 KIAA1109Q2LD37 5005 aa13.57□□□□□ -0.24
CUEDC1-201ENST00000360238 MYCBP2O75592 4640 aa13.5□□□□□ -0.25
CUEDC1-201ENST00000360238 KRTAP3-3Q9BYR6 98 aa13.47□□□□□ -0.25
CUEDC1-201ENST00000360238 PRAC1Q96KF2 57 aa13.42□□□□□ -0.26
CUEDC1-201ENST00000360238 ADM2Q7Z4H4 148 aa13.42□□□□□ -0.26
CUEDC1-201ENST00000360238 S4R3F8 94 aa13.41□□□□□ -0.26
CUEDC1-201ENST00000360238 TPRXLQ17RH7 258 aa13.38□□□□□ -0.27
CUEDC1-201ENST00000360238 KRTAP10-6P60371 365 aaPredicted RBP13.3□□□□□ -0.28
CUEDC1-201ENST00000360238 EPPK1P58107 5090 aaKnown RBP13.29□□□□□ -0.28
CUEDC1-201ENST00000360238 KRTAP3-2Q9BYR7 98 aa13.22□□□□□ -0.29
CUEDC1-201ENST00000360238 K7ERS5 55 aa13.18□□□□□ -0.3
CUEDC1-201ENST00000360238 LRP2P98164 4655 aa13.12□□□□□ -0.31
CUEDC1-201ENST00000360238 CSAG1Q6PB30 78 aa13.11□□□□□ -0.31
CUEDC1-201ENST00000360238 KRTAP13-4Q3LI77 160 aa13.08□□□□□ -0.31
CUEDC1-201ENST00000360238 KRTAP4-5Q9BYR2 181 aa13.08□□□□□ -0.32
CUEDC1-201ENST00000360238 LPAP08519 4548 aa13.06□□□□□ -0.32
CUEDC1-201ENST00000360238 P0C880 135 aa13.03□□□□□ -0.32
CUEDC1-201ENST00000360238 ABCA13Q86UQ4 5058 aa12.99□□□□□ -0.33
CUEDC1-201ENST00000360238 LINC01554Q52M75 96 aa12.98□□□□□ -0.33
CUEDC1-201ENST00000360238 A0A0D9SG42 100 aa12.92□□□□□ -0.34
CUEDC1-201ENST00000360238 SEC61BP60468 96 aaKnown RBP12.87□□□□□ -0.35
CUEDC1-201ENST00000360238 KRTAP25-1Q3LHN0 102 aa12.85□□□□□ -0.35
CUEDC1-201ENST00000360238 ROMO1P60602 79 aa12.81□□□□□ -0.36
CUEDC1-201ENST00000360238 J3QL48 77 aa12.75□□□□□ -0.37
CUEDC1-201ENST00000360238 M0QZ58 72 aa12.73□□□□□ -0.37
CUEDC1-201ENST00000360238 MUC17Q685J3 4493 aa12.68□□□□□ -0.38
CUEDC1-201ENST00000360238 KRTAP12-2P59991 146 aa12.65□□□□□ -0.38
CUEDC1-201ENST00000360238 KRTAP12-1P59990 96 aa12.62□□□□□ -0.39
CUEDC1-201ENST00000360238 HERC2O95714 4834 aa12.6□□□□□ -0.39
CUEDC1-201ENST00000360238 KRTAP4-1Q9BYQ7 146 aa12.59□□□□□ -0.39
CUEDC1-201ENST00000360238 CRIPTQ9P021 101 aa12.56□□□□□ -0.4
CUEDC1-201ENST00000360238 SPINT4Q6UDR6 99 aa12.53□□□□□ -0.4
CUEDC1-201ENST00000360238 KRTAP19-2Q3LHN2 52 aa12.42□□□□□ -0.42
CUEDC1-201ENST00000360238 R4GN34 69 aa12.41□□□□□ -0.42
CUEDC1-201ENST00000360238 BIRC6Q9NR09 4857 aa12.4□□□□□ -0.42
CUEDC1-201ENST00000360238 C10orf95Q9H7T3 257 aa12.23□□□□□ -0.45
CUEDC1-201ENST00000360238 LORP23490 312 aaPredicted RBP12.22□□□□□ -0.45
CUEDC1-201ENST00000360238 FLGP20930 4061 aaPredicted RBP12.1□□□□□ -0.47
CUEDC1-201ENST00000360238 MUC2Q02817 5179 aa11.96□□□□□ -0.49
CUEDC1-201ENST00000360238 HMCN2Q8NDA2 5059 aa11.96□□□□□ -0.5
CUEDC1-201ENST00000360238 HERC1Q15751 4861 aa11.94□□□□□ -0.5
CUEDC1-201ENST00000360238 PCLOQ9Y6V0 5065 aa11.93□□□□□ -0.5
CUEDC1-201ENST00000360238 CAMK2N1Q7Z7J9 78 aa11.74□□□□□ -0.53
CUEDC1-201ENST00000360238 LCE2CQ5TA81 110 aa11.73□□□□□ -0.53
CUEDC1-201ENST00000360238 KRTAP15-1Q3LI76 137 aa11.64□□□□□ -0.55
CUEDC1-201ENST00000360238 PP632Q6XCG6 107 aa11.51□□□□□ -0.57
CUEDC1-201ENST00000360238 SPRR2GQ9BYE4 73 aa11.45□□□□□ -0.58
CUEDC1-201ENST00000360238 MT1HP80294 61 aa11.44□□□□□ -0.58
CUEDC1-201ENST00000360238 FAT4Q6V0I7 4981 aa11.43□□□□□ -0.58
CUEDC1-201ENST00000360238 RNF213Q63HN8 5207 aa11.41□□□□□ -0.58
CUEDC1-201ENST00000360238 M0R2T5 61 aa11.41□□□□□ -0.58
CUEDC1-201ENST00000360238 H3BS24 57 aa11.4□□□□□ -0.58
CUEDC1-201ENST00000360238 KRTAP19-1Q8IUB9 90 aa11.34□□□□□ -0.59
CUEDC1-201ENST00000360238 TNP1P09430 55 aa11.31□□□□□ -0.6
CUEDC1-201ENST00000360238 UBR4Q5T4S7 5183 aa11.31□□□□□ -0.6
CUEDC1-201ENST00000360238 PLAC4Q8WY50 150 aa11.27□□□□□ -0.6
CUEDC1-201ENST00000360238 KRTAP23-1A1A580 65 aa11.24□□□□□ -0.61
CUEDC1-201ENST00000360238 MT2AP02795 61 aa11.21□□□□□ -0.62
CUEDC1-201ENST00000360238 NDUFAF8A1L188 74 aa11.18□□□□□ -0.62
CUEDC1-201ENST00000360238 MT1FP04733 61 aa11.18□□□□□ -0.62
CUEDC1-201ENST00000360238 KRTAP10-10P60014 251 aa11.15□□□□□ -0.62
CUEDC1-201ENST00000360238 KRTAP9-8Q9BYQ0 159 aa11.14□□□□□ -0.63
CUEDC1-201ENST00000360238 KRTAP19-8Q3LI54 63 aa10.99□□□□□ -0.65
CUEDC1-201ENST00000360238 MT1BP07438 61 aa10.79□□□□□ -0.68
CUEDC1-201ENST00000360238 LUZP6Q538Z0 58 aa10.7□□□□□ -0.7
CUEDC1-201ENST00000360238 LCE3AQ5TA76 89 aa10.7□□□□□ -0.7
CUEDC1-201ENST00000360238 KRTAP9-3Q9BYQ3 159 aa10.69□□□□□ -0.7
CUEDC1-201ENST00000360238 KRTAP10-5P60370 271 aa10.67□□□□□ -0.7
CUEDC1-201ENST00000360238 MT1XP80297 61 aa10.66□□□□□ -0.7
CUEDC1-201ENST00000360238 SPRR5A0A1B0GTR4 108 aa10.62□□□□□ -0.71
CUEDC1-201ENST00000360238 KRTAP8-1Q8IUC2 63 aa10.51□□□□□ -0.73
CUEDC1-201ENST00000360238 A0A0A0MQY5 61 aa10.43□□□□□ -0.74
CUEDC1-201ENST00000360238 KRTAP10-12P60413 245 aa10.41□□□□□ -0.74
CUEDC1-201ENST00000360238 PRO2289Q9P1D8 64 aa10.38□□□□□ -0.75
CUEDC1-201ENST00000360238 KRTAP10-7P60409 375 aaPredicted RBP10.29□□□□□ -0.76
CUEDC1-201ENST00000360238 LCE2AQ5TA79 106 aaPredicted RBP10.29□□□□□ -0.76
CUEDC1-201ENST00000360238 LCE2BO14633 110 aa10.26□□□□□ -0.77
CUEDC1-201ENST00000360238 KRTAP12-3P60328 96 aa10.24□□□□□ -0.77
CUEDC1-201ENST00000360238 KRTAP19-5Q3LI72 72 aa9.85□□□□□ -0.83
CUEDC1-201ENST00000360238 USH2AO75445 5202 aa9.84□□□□□ -0.83
CUEDC1-201ENST00000360238 KRTAP4-8A0A0G2JLE6 195 aa9.65□□□□□ -0.86
CUEDC1-201ENST00000360238 KRTAP4-8Q9BYQ9 185 aa9.65□□□□□ -0.86
CUEDC1-201ENST00000360238 LCE3CQ5T5A8 94 aa9.63□□□□□ -0.87
CUEDC1-201ENST00000360238 KMT2DO14686 5537 aa9.59□□□□□ -0.87
CUEDC1-201ENST00000360238 KRTAP19-7Q3SYF9 63 aa9.5□□□□□ -0.89
CUEDC1-201ENST00000360238 SSPOA2VEC9 5147 aa9.48□□□□□ -0.89
CUEDC1-201ENST00000360238 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
CUEDC1-201ENST00000360238 KRTAP19-4Q3LI73 84 aa9.36□□□□□ -0.91
CUEDC1-201ENST00000360238 MT1EP04732 61 aa9.26□□□□□ -0.93
CUEDC1-201ENST00000360238 MT1LQ93083 61 aa9.22□□□□□ -0.93
CUEDC1-201ENST00000360238 KRTAP9-6A8MVA2 160 aa9.19□□□□□ -0.94
CUEDC1-201ENST00000360238 INE1O15225 51 aa9.16□□□□□ -0.94
CUEDC1-201ENST00000360238 KRTAP4-7Q9BYR0 210 aa9.11□□□□□ -0.95
CUEDC1-201ENST00000360238 LCE2DQ5TA82 110 aaPredicted RBP8.94□□□□□ -0.98
CUEDC1-201ENST00000360238 FSIP2Q5CZC0 6907 aa8.94□□□□□ -0.98
CUEDC1-201ENST00000360238 KRTAP2-3P0C7H8 128 aa8.88□□□□□ -0.99
CUEDC1-201ENST00000360238 KRTAP2-4Q9BYR9 128 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms