RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 FAT1Q14517 4588 aa4.45□□□□□ -1.7
CD46-206ENST00000360212 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
CD46-206ENST00000360212 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
CD46-206ENST00000360212 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
CD46-206ENST00000360212 KRTAP3-3Q9BYR6 98 aa4.41□□□□□ -1.7
CD46-206ENST00000360212 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
CD46-206ENST00000360212 PKD1P98161 4303 aa4.4□□□□□ -1.71
CD46-206ENST00000360212 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
CD46-206ENST00000360212 HSPG2P98160 4391 aa4.35□□□□□ -1.71
CD46-206ENST00000360212 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.72
CD46-206ENST00000360212 KRTAP12-1P59990 96 aa4.34□□□□□ -1.72
CD46-206ENST00000360212 APOBP04114 4563 aaKnown RBP4.32□□□□□ -1.72
CD46-206ENST00000360212 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
CD46-206ENST00000360212 DNHD1Q96M86 4753 aa4.3□□□□□ -1.72
CD46-206ENST00000360212 XP32Q5T750 250 aa4.3□□□□□ -1.72
CD46-206ENST00000360212 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
CD46-206ENST00000360212 SACSQ9NZJ4 4579 aa4.29□□□□□ -1.72
CD46-206ENST00000360212 LPAP08519 4548 aa4.27□□□□□ -1.73
CD46-206ENST00000360212 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
CD46-206ENST00000360212 FAT3Q8TDW7 4589 aa4.21□□□□□ -1.74
CD46-206ENST00000360212 M0QZ58 72 aa4.19□□□□□ -1.74
CD46-206ENST00000360212 PKHD1L1Q86WI1 4243 aa4.18□□□□□ -1.74
CD46-206ENST00000360212 LRP2P98164 4655 aa4.14□□□□□ -1.75
CD46-206ENST00000360212 R4GN34 69 aa4.13□□□□□ -1.75
CD46-206ENST00000360212 KMT2CQ8NEZ4 4911 aaKnown RBP4.13□□□□□ -1.75
CD46-206ENST00000360212 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
CD46-206ENST00000360212 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
CD46-206ENST00000360212 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
CD46-206ENST00000360212 J3QL48 77 aa4.04□□□□□ -1.76
CD46-206ENST00000360212 TNXBP22105 4242 aa4.03□□□□□ -1.76
CD46-206ENST00000360212 RYR1P21817 5038 aa4.03□□□□□ -1.76
CD46-206ENST00000360212 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
CD46-206ENST00000360212 Q5VSD8 79 aa3.93□□□□□ -1.78
CD46-206ENST00000360212 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
CD46-206ENST00000360212 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
CD46-206ENST00000360212 KRTAP21-3Q3LHN1 58 aa3.91□□□□□ -1.78
CD46-206ENST00000360212 ABCA13Q86UQ4 5058 aa3.91□□□□□ -1.78
CD46-206ENST00000360212 MUC2Q02817 5179 aa3.9□□□□□ -1.78
CD46-206ENST00000360212 KIAA1109Q2LD37 5005 aa3.89□□□□□ -1.79
CD46-206ENST00000360212 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
CD46-206ENST00000360212 RYR2Q92736 4967 aa3.82□□□□□ -1.8
CD46-206ENST00000360212 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
CD46-206ENST00000360212 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
CD46-206ENST00000360212 RYR3Q15413 4870 aa3.8□□□□□ -1.8
CD46-206ENST00000360212 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
CD46-206ENST00000360212 INE1O15225 51 aa3.79□□□□□ -1.8
CD46-206ENST00000360212 TNP1P09430 55 aa3.78□□□□□ -1.8
CD46-206ENST00000360212 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
CD46-206ENST00000360212 MUC17Q685J3 4493 aa3.71□□□□□ -1.82
CD46-206ENST00000360212 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
CD46-206ENST00000360212 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
CD46-206ENST00000360212 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
CD46-206ENST00000360212 FAT4Q6V0I7 4981 aa3.66□□□□□ -1.82
CD46-206ENST00000360212 PCLOQ9Y6V0 5065 aa3.65□□□□□ -1.82
CD46-206ENST00000360212 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
CD46-206ENST00000360212 KRTAP4-5Q9BYR2 181 aa3.6□□□□□ -1.83
CD46-206ENST00000360212 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
CD46-206ENST00000360212 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
CD46-206ENST00000360212 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
CD46-206ENST00000360212 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
CD46-206ENST00000360212 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
CD46-206ENST00000360212 M0R2T5 61 aa3.44□□□□□ -1.86
CD46-206ENST00000360212 HERC2O95714 4834 aa3.43□□□□□ -1.86
CD46-206ENST00000360212 UBR4Q5T4S7 5183 aa3.43□□□□□ -1.86
CD46-206ENST00000360212 HERC1Q15751 4861 aa3.41□□□□□ -1.86
CD46-206ENST00000360212 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.86
CD46-206ENST00000360212 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
CD46-206ENST00000360212 KMT2DO14686 5537 aa3.37□□□□□ -1.87
CD46-206ENST00000360212 KRTAP10-10P60014 251 aa3.35□□□□□ -1.87
CD46-206ENST00000360212 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
CD46-206ENST00000360212 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.88
CD46-206ENST00000360212 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
CD46-206ENST00000360212 BIRC6Q9NR09 4857 aa3.28□□□□□ -1.88
CD46-206ENST00000360212 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CD46-206ENST00000360212 USH2AO75445 5202 aa3.27□□□□□ -1.89
CD46-206ENST00000360212 MT1FP04733 61 aa3.27□□□□□ -1.89
CD46-206ENST00000360212 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
CD46-206ENST00000360212 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
CD46-206ENST00000360212 MT1XP80297 61 aa3.23□□□□□ -1.89
CD46-206ENST00000360212 MT2AP02795 61 aa3.21□□□□□ -1.9
CD46-206ENST00000360212 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
CD46-206ENST00000360212 MT1BP07438 61 aa3.17□□□□□ -1.9
CD46-206ENST00000360212 MT1HP80294 61 aa3.16□□□□□ -1.9
CD46-206ENST00000360212 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
CD46-206ENST00000360212 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
CD46-206ENST00000360212 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.9
CD46-206ENST00000360212 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
CD46-206ENST00000360212 KRTAP9-8Q9BYQ0 159 aa3.12□□□□□ -1.91
CD46-206ENST00000360212 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
CD46-206ENST00000360212 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
CD46-206ENST00000360212 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
CD46-206ENST00000360212 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
CD46-206ENST00000360212 LCE2BO14633 110 aa3.02□□□□□ -1.93
CD46-206ENST00000360212 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
CD46-206ENST00000360212 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
CD46-206ENST00000360212 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
CD46-206ENST00000360212 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
CD46-206ENST00000360212 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
CD46-206ENST00000360212 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
CD46-206ENST00000360212 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms