RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
CSDE1-203ENST00000358528 Q5VSD8 79 aa3.41□□□□□ -1.86
CSDE1-203ENST00000358528 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
CSDE1-203ENST00000358528 P0C880 135 aa3.4□□□□□ -1.87
CSDE1-203ENST00000358528 DNAH5Q8TE73 4624 aa3.39□□□□□ -1.87
CSDE1-203ENST00000358528 XP32Q5T750 250 aa3.39□□□□□ -1.87
CSDE1-203ENST00000358528 FAT1Q14517 4588 aa3.38□□□□□ -1.87
CSDE1-203ENST00000358528 KRTAP13-4Q3LI77 160 aa3.38□□□□□ -1.87
CSDE1-203ENST00000358528 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
CSDE1-203ENST00000358528 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
CSDE1-203ENST00000358528 HYDINQ4G0P3 5121 aa3.35□□□□□ -1.87
CSDE1-203ENST00000358528 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
CSDE1-203ENST00000358528 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.88
CSDE1-203ENST00000358528 TPRXLQ17RH7 258 aa3.34□□□□□ -1.88
CSDE1-203ENST00000358528 M0QZ58 72 aa3.33□□□□□ -1.88
CSDE1-203ENST00000358528 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
CSDE1-203ENST00000358528 R4GN34 69 aa3.32□□□□□ -1.88
CSDE1-203ENST00000358528 PKHD1P08F94 4074 aa3.32□□□□□ -1.88
CSDE1-203ENST00000358528 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
CSDE1-203ENST00000358528 A0A1B0GVY2 172 aa3.31□□□□□ -1.88
CSDE1-203ENST00000358528 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
CSDE1-203ENST00000358528 RYR2Q92736 4967 aa3.31□□□□□ -1.88
CSDE1-203ENST00000358528 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-203ENST00000358528 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
CSDE1-203ENST00000358528 FAT2Q9NYQ8 4349 aa3.28□□□□□ -1.88
CSDE1-203ENST00000358528 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.88
CSDE1-203ENST00000358528 KRTAP9-2Q9BYQ4 174 aa3.28□□□□□ -1.88
CSDE1-203ENST00000358528 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-203ENST00000358528 KRTAP9-6A0A140TA67 174 aa3.26□□□□□ -1.89
CSDE1-203ENST00000358528 PKD1P98161 4303 aa3.26□□□□□ -1.89
CSDE1-203ENST00000358528 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
CSDE1-203ENST00000358528 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
CSDE1-203ENST00000358528 LRP1Q07954 4544 aaKnown RBP3.24□□□□□ -1.89
CSDE1-203ENST00000358528 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
CSDE1-203ENST00000358528 SACSQ9NZJ4 4579 aa3.23□□□□□ -1.89
CSDE1-203ENST00000358528 EPPK1P58107 5090 aaKnown RBP3.21□□□□□ -1.9
CSDE1-203ENST00000358528 BIRC6Q9NR09 4857 aa3.2□□□□□ -1.9
CSDE1-203ENST00000358528 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
CSDE1-203ENST00000358528 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
CSDE1-203ENST00000358528 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
CSDE1-203ENST00000358528 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
CSDE1-203ENST00000358528 HERC2O95714 4834 aa3.17□□□□□ -1.9
CSDE1-203ENST00000358528 SEC61BP60468 96 aaKnown RBP3.17□□□□□ -1.9
CSDE1-203ENST00000358528 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CSDE1-203ENST00000358528 MT1HL1P0DM35 61 aa3.14□□□□□ -1.91
CSDE1-203ENST00000358528 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
CSDE1-203ENST00000358528 HSPG2P98160 4391 aa3.13□□□□□ -1.91
CSDE1-203ENST00000358528 PLAC4Q8WY50 150 aa3.13□□□□□ -1.91
CSDE1-203ENST00000358528 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
CSDE1-203ENST00000358528 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
CSDE1-203ENST00000358528 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
CSDE1-203ENST00000358528 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
CSDE1-203ENST00000358528 KIAA1109Q2LD37 5005 aa3.1□□□□□ -1.91
CSDE1-203ENST00000358528 LRP2P98164 4655 aa3.09□□□□□ -1.92
CSDE1-203ENST00000358528 KRTAP17-1Q9BYP8 105 aa3.09□□□□□ -1.92
CSDE1-203ENST00000358528 RYR1P21817 5038 aa3.07□□□□□ -1.92
CSDE1-203ENST00000358528 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
CSDE1-203ENST00000358528 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
CSDE1-203ENST00000358528 M0R2T5 61 aa3.05□□□□□ -1.92
CSDE1-203ENST00000358528 LPAP08519 4548 aa3.02□□□□□ -1.93
CSDE1-203ENST00000358528 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
CSDE1-203ENST00000358528 TNP1P09430 55 aa3.01□□□□□ -1.93
CSDE1-203ENST00000358528 TNXBP22105 4242 aa3□□□□□ -1.93
CSDE1-203ENST00000358528 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
CSDE1-203ENST00000358528 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
CSDE1-203ENST00000358528 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
CSDE1-203ENST00000358528 KRTAP4-1Q9BYQ7 146 aa2.98□□□□□ -1.93
CSDE1-203ENST00000358528 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
CSDE1-203ENST00000358528 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
CSDE1-203ENST00000358528 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
CSDE1-203ENST00000358528 MUC2Q02817 5179 aa2.85□□□□□ -1.95
CSDE1-203ENST00000358528 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
CSDE1-203ENST00000358528 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
CSDE1-203ENST00000358528 KRTAP23-1A1A580 65 aa2.75□□□□□ -1.97
CSDE1-203ENST00000358528 MUC17Q685J3 4493 aa2.73□□□□□ -1.97
CSDE1-203ENST00000358528 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
CSDE1-203ENST00000358528 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
CSDE1-203ENST00000358528 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
CSDE1-203ENST00000358528 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
CSDE1-203ENST00000358528 HERC1Q15751 4861 aa2.69□□□□□ -1.98
CSDE1-203ENST00000358528 KRTAP19-4Q3LI73 84 aa2.68□□□□□ -1.98
CSDE1-203ENST00000358528 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
CSDE1-203ENST00000358528 FLGP20930 4061 aaPredicted RBP2.67□□□□□ -1.98
CSDE1-203ENST00000358528 SPRR2GQ9BYE4 73 aa2.66□□□□□ -1.98
CSDE1-203ENST00000358528 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
CSDE1-203ENST00000358528 MT1FP04733 61 aa2.65□□□□□ -1.99
CSDE1-203ENST00000358528 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
CSDE1-203ENST00000358528 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
CSDE1-203ENST00000358528 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
CSDE1-203ENST00000358528 MT1HP80294 61 aa2.64□□□□□ -1.99
CSDE1-203ENST00000358528 MT2AP02795 61 aa2.64□□□□□ -1.99
CSDE1-203ENST00000358528 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
CSDE1-203ENST00000358528 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
CSDE1-203ENST00000358528 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
CSDE1-203ENST00000358528 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
CSDE1-203ENST00000358528 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -2
CSDE1-203ENST00000358528 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
CSDE1-203ENST00000358528 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
CSDE1-203ENST00000358528 KRTAP9-8Q9BYQ0 159 aa2.54□□□□□ -2
CSDE1-203ENST00000358528 KRTAP10-5P60370 271 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms