RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 FAT1Q14517 4588 aa3.95□□□□□ -1.78
CD46-204ENST00000357714 PKHD1P08F94 4074 aa3.95□□□□□ -1.78
CD46-204ENST00000357714 KRTAP3-3Q9BYR6 98 aa3.94□□□□□ -1.78
CD46-204ENST00000357714 S4R3F8 94 aa3.94□□□□□ -1.78
CD46-204ENST00000357714 KRTAP3-2Q9BYR7 98 aa3.93□□□□□ -1.78
CD46-204ENST00000357714 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
CD46-204ENST00000357714 RYR2Q92736 4967 aa3.91□□□□□ -1.78
CD46-204ENST00000357714 DYNC1H1Q14204 4646 aaKnown RBP3.91□□□□□ -1.78
CD46-204ENST00000357714 LCE2DQ5TA82 110 aaPredicted RBP3.91□□□□□ -1.78
CD46-204ENST00000357714 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.79
CD46-204ENST00000357714 KRTAP10-8P60410 259 aa3.89□□□□□ -1.79
CD46-204ENST00000357714 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
CD46-204ENST00000357714 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
CD46-204ENST00000357714 APOBP04114 4563 aaKnown RBP3.84□□□□□ -1.79
CD46-204ENST00000357714 XP32Q5T750 250 aa3.84□□□□□ -1.79
CD46-204ENST00000357714 KMT2CQ8NEZ4 4911 aaKnown RBP3.83□□□□□ -1.8
CD46-204ENST00000357714 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
CD46-204ENST00000357714 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
CD46-204ENST00000357714 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
CD46-204ENST00000357714 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
CD46-204ENST00000357714 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
CD46-204ENST00000357714 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
CD46-204ENST00000357714 RYR3Q15413 4870 aa3.79□□□□□ -1.8
CD46-204ENST00000357714 HSPG2P98160 4391 aa3.79□□□□□ -1.8
CD46-204ENST00000357714 M0QZ58 72 aa3.77□□□□□ -1.81
CD46-204ENST00000357714 Q5VSD8 79 aa3.74□□□□□ -1.81
CD46-204ENST00000357714 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
CD46-204ENST00000357714 R4GN34 69 aa3.7□□□□□ -1.82
CD46-204ENST00000357714 TNXBP22105 4242 aa3.7□□□□□ -1.82
CD46-204ENST00000357714 RYR1P21817 5038 aa3.67□□□□□ -1.82
CD46-204ENST00000357714 PLAC4Q8WY50 150 aa3.65□□□□□ -1.83
CD46-204ENST00000357714 LRP2P98164 4655 aa3.63□□□□□ -1.83
CD46-204ENST00000357714 LPAP08519 4548 aa3.63□□□□□ -1.83
CD46-204ENST00000357714 MT1HL1P0DM35 61 aa3.62□□□□□ -1.83
CD46-204ENST00000357714 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
CD46-204ENST00000357714 LORP23490 312 aaPredicted RBP3.57□□□□□ -1.84
CD46-204ENST00000357714 KRTAP17-1Q9BYP8 105 aa3.57□□□□□ -1.84
CD46-204ENST00000357714 CAMK2N1Q7Z7J9 78 aa3.56□□□□□ -1.84
CD46-204ENST00000357714 KIAA1109Q2LD37 5005 aa3.56□□□□□ -1.84
CD46-204ENST00000357714 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
CD46-204ENST00000357714 BIRC6Q9NR09 4857 aa3.51□□□□□ -1.85
CD46-204ENST00000357714 HERC2O95714 4834 aa3.51□□□□□ -1.85
CD46-204ENST00000357714 SEC61BP60468 96 aaKnown RBP3.51□□□□□ -1.85
CD46-204ENST00000357714 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
CD46-204ENST00000357714 KRTAP4-1Q9BYQ7 146 aa3.43□□□□□ -1.86
CD46-204ENST00000357714 KRTAP4-5Q9BYR2 181 aa3.41□□□□□ -1.86
CD46-204ENST00000357714 TNP1P09430 55 aa3.41□□□□□ -1.86
CD46-204ENST00000357714 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
CD46-204ENST00000357714 J3QL48 77 aa3.36□□□□□ -1.87
CD46-204ENST00000357714 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
CD46-204ENST00000357714 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
CD46-204ENST00000357714 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
CD46-204ENST00000357714 MUC2Q02817 5179 aa3.29□□□□□ -1.88
CD46-204ENST00000357714 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
CD46-204ENST00000357714 FLGP20930 4061 aaPredicted RBP3.25□□□□□ -1.89
CD46-204ENST00000357714 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
CD46-204ENST00000357714 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
CD46-204ENST00000357714 LCE2BO14633 110 aa3.19□□□□□ -1.9
CD46-204ENST00000357714 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
CD46-204ENST00000357714 HERC1Q15751 4861 aa3.18□□□□□ -1.9
CD46-204ENST00000357714 M0R2T5 61 aa3.17□□□□□ -1.9
CD46-204ENST00000357714 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.9
CD46-204ENST00000357714 KRTAP19-1Q8IUB9 90 aa3.14□□□□□ -1.91
CD46-204ENST00000357714 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
CD46-204ENST00000357714 KRTAP10-10P60014 251 aa3.09□□□□□ -1.92
CD46-204ENST00000357714 LCE2CQ5TA81 110 aa3.08□□□□□ -1.92
CD46-204ENST00000357714 INE1O15225 51 aa3.08□□□□□ -1.92
CD46-204ENST00000357714 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
CD46-204ENST00000357714 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
CD46-204ENST00000357714 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
CD46-204ENST00000357714 MT1FP04733 61 aa3.03□□□□□ -1.92
CD46-204ENST00000357714 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
CD46-204ENST00000357714 MT2AP02795 61 aa3.02□□□□□ -1.93
CD46-204ENST00000357714 MT1HP80294 61 aa3.02□□□□□ -1.93
CD46-204ENST00000357714 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
CD46-204ENST00000357714 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
CD46-204ENST00000357714 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
CD46-204ENST00000357714 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
CD46-204ENST00000357714 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
CD46-204ENST00000357714 MT1XP80297 61 aa2.97□□□□□ -1.93
CD46-204ENST00000357714 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
CD46-204ENST00000357714 KRTAP9-8Q9BYQ0 159 aa2.96□□□□□ -1.94
CD46-204ENST00000357714 MT1BP07438 61 aa2.95□□□□□ -1.94
CD46-204ENST00000357714 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
CD46-204ENST00000357714 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
CD46-204ENST00000357714 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
CD46-204ENST00000357714 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
CD46-204ENST00000357714 KMT2DO14686 5537 aa2.76□□□□□ -1.97
CD46-204ENST00000357714 KRTAP4-8Q9BYQ9 185 aa2.75□□□□□ -1.97
CD46-204ENST00000357714 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
CD46-204ENST00000357714 KRTAP4-8A0A0G2JLE6 195 aa2.73□□□□□ -1.97
CD46-204ENST00000357714 USH2AO75445 5202 aa2.73□□□□□ -1.97
CD46-204ENST00000357714 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.7□□□□□ -1.98
CD46-204ENST00000357714 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
CD46-204ENST00000357714 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
CD46-204ENST00000357714 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
CD46-204ENST00000357714 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
CD46-204ENST00000357714 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
CD46-204ENST00000357714 KRTAP9-6A0A140TA67 174 aa2.67□□□□□ -1.98
CD46-204ENST00000357714 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms