RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 COX6B2Q6YFQ2 88 aa6.62□□□□□ -1.35
SFPQ-201ENST00000357214 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
SFPQ-201ENST00000357214 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.35
SFPQ-201ENST00000357214 A0A1B0GVY2 172 aa6.58□□□□□ -1.36
SFPQ-201ENST00000357214 RYR2Q92736 4967 aa6.55□□□□□ -1.36
SFPQ-201ENST00000357214 FAT2Q9NYQ8 4349 aa6.55□□□□□ -1.36
SFPQ-201ENST00000357214 KIAA1109Q2LD37 5005 aa6.54□□□□□ -1.36
SFPQ-201ENST00000357214 RYR3Q15413 4870 aa6.54□□□□□ -1.36
SFPQ-201ENST00000357214 VPS13BQ7Z7G8 4022 aa6.52□□□□□ -1.37
SFPQ-201ENST00000357214 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
SFPQ-201ENST00000357214 PKD1P98161 4303 aa6.48□□□□□ -1.37
SFPQ-201ENST00000357214 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
SFPQ-201ENST00000357214 S4R3F8 94 aa6.47□□□□□ -1.37
SFPQ-201ENST00000357214 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
SFPQ-201ENST00000357214 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SFPQ-201ENST00000357214 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
SFPQ-201ENST00000357214 RYR1P21817 5038 aa6.41□□□□□ -1.38
SFPQ-201ENST00000357214 LRP1Q07954 4544 aaKnown RBP6.39□□□□□ -1.39
SFPQ-201ENST00000357214 XP32Q5T750 250 aa6.39□□□□□ -1.39
SFPQ-201ENST00000357214 KRTAP4-5Q9BYR2 181 aa6.39□□□□□ -1.39
SFPQ-201ENST00000357214 EPPK1P58107 5090 aaKnown RBP6.39□□□□□ -1.39
SFPQ-201ENST00000357214 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
SFPQ-201ENST00000357214 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
SFPQ-201ENST00000357214 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
SFPQ-201ENST00000357214 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
SFPQ-201ENST00000357214 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
SFPQ-201ENST00000357214 HSPG2P98160 4391 aa6.24□□□□□ -1.41
SFPQ-201ENST00000357214 PLAC4Q8WY50 150 aa6.24□□□□□ -1.41
SFPQ-201ENST00000357214 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
SFPQ-201ENST00000357214 M0R2T5 61 aa6.19□□□□□ -1.42
SFPQ-201ENST00000357214 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
SFPQ-201ENST00000357214 MT1HL1P0DM35 61 aa6.15□□□□□ -1.42
SFPQ-201ENST00000357214 R4GN34 69 aa6.15□□□□□ -1.43
SFPQ-201ENST00000357214 M0QZ58 72 aa6.14□□□□□ -1.43
SFPQ-201ENST00000357214 HERC2O95714 4834 aa6.1□□□□□ -1.43
SFPQ-201ENST00000357214 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
SFPQ-201ENST00000357214 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.44
SFPQ-201ENST00000357214 LRP2P98164 4655 aa6.06□□□□□ -1.44
SFPQ-201ENST00000357214 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
SFPQ-201ENST00000357214 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
SFPQ-201ENST00000357214 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
SFPQ-201ENST00000357214 BIRC6Q9NR09 4857 aa5.96□□□□□ -1.46
SFPQ-201ENST00000357214 LPAP08519 4548 aa5.93□□□□□ -1.46
SFPQ-201ENST00000357214 TNXBP22105 4242 aa5.91□□□□□ -1.46
SFPQ-201ENST00000357214 HERC1Q15751 4861 aa5.9□□□□□ -1.47
SFPQ-201ENST00000357214 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
SFPQ-201ENST00000357214 MUC2Q02817 5179 aa5.81□□□□□ -1.48
SFPQ-201ENST00000357214 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
SFPQ-201ENST00000357214 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
SFPQ-201ENST00000357214 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.49
SFPQ-201ENST00000357214 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
SFPQ-201ENST00000357214 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
SFPQ-201ENST00000357214 KRTAP10-10P60014 251 aa5.63□□□□□ -1.51
SFPQ-201ENST00000357214 UBR4Q5T4S7 5183 aa5.62□□□□□ -1.51
SFPQ-201ENST00000357214 FAT4Q6V0I7 4981 aa5.58□□□□□ -1.52
SFPQ-201ENST00000357214 TNP1P09430 55 aa5.57□□□□□ -1.52
SFPQ-201ENST00000357214 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
SFPQ-201ENST00000357214 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.53
SFPQ-201ENST00000357214 INE1O15225 51 aa5.43□□□□□ -1.54
SFPQ-201ENST00000357214 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.56
SFPQ-201ENST00000357214 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
SFPQ-201ENST00000357214 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
SFPQ-201ENST00000357214 MT1HP80294 61 aa5.22□□□□□ -1.57
SFPQ-201ENST00000357214 LCE2CQ5TA81 110 aa5.15□□□□□ -1.58
SFPQ-201ENST00000357214 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
SFPQ-201ENST00000357214 MT1FP04733 61 aa5.13□□□□□ -1.59
SFPQ-201ENST00000357214 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
SFPQ-201ENST00000357214 MT2AP02795 61 aa5.11□□□□□ -1.59
SFPQ-201ENST00000357214 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
SFPQ-201ENST00000357214 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SFPQ-201ENST00000357214 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
SFPQ-201ENST00000357214 USH2AO75445 5202 aa5.04□□□□□ -1.6
SFPQ-201ENST00000357214 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
SFPQ-201ENST00000357214 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
SFPQ-201ENST00000357214 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
SFPQ-201ENST00000357214 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
SFPQ-201ENST00000357214 MT1BP07438 61 aa4.85□□□□□ -1.63
SFPQ-201ENST00000357214 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
SFPQ-201ENST00000357214 MT1XP80297 61 aa4.82□□□□□ -1.64
SFPQ-201ENST00000357214 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
SFPQ-201ENST00000357214 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
SFPQ-201ENST00000357214 KMT2DO14686 5537 aa4.76□□□□□ -1.65
SFPQ-201ENST00000357214 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
SFPQ-201ENST00000357214 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
SFPQ-201ENST00000357214 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
SFPQ-201ENST00000357214 LCE2BO14633 110 aa4.7□□□□□ -1.66
SFPQ-201ENST00000357214 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
SFPQ-201ENST00000357214 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
SFPQ-201ENST00000357214 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
SFPQ-201ENST00000357214 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
SFPQ-201ENST00000357214 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
SFPQ-201ENST00000357214 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
SFPQ-201ENST00000357214 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
SFPQ-201ENST00000357214 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
SFPQ-201ENST00000357214 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
SFPQ-201ENST00000357214 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
SFPQ-201ENST00000357214 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
SFPQ-201ENST00000357214 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
SFPQ-201ENST00000357214 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
SFPQ-201ENST00000357214 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms