RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
LSS-201ENST00000356396 LCA10Q71F78 164 aa7.23□□□□□ -1.25
LSS-201ENST00000356396 ACYP2P14621 99 aa7.21□□□□□ -1.25
LSS-201ENST00000356396 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
LSS-201ENST00000356396 A6NED7 52 aa7.2□□□□□ -1.26
LSS-201ENST00000356396 RPL37P61927 97 aaKnown RBP7.2□□□□□ -1.26
LSS-201ENST00000356396 Q75L30 129 aa7.2□□□□□ -1.26
LSS-201ENST00000356396 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.27
LSS-201ENST00000356396 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
LSS-201ENST00000356396 HMCN2Q8NDA2 5059 aa7.13□□□□□ -1.27
LSS-201ENST00000356396 A6NN06 94 aa7.11□□□□□ -1.27
LSS-201ENST00000356396 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
LSS-201ENST00000356396 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
LSS-201ENST00000356396 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
LSS-201ENST00000356396 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
LSS-201ENST00000356396 MUC17Q685J3 4493 aa7.07□□□□□ -1.28
LSS-201ENST00000356396 COX6B2Q6YFQ2 88 aa7.03□□□□□ -1.28
LSS-201ENST00000356396 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
LSS-201ENST00000356396 A0A1B0GU69 56 aa7.02□□□□□ -1.29
LSS-201ENST00000356396 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
LSS-201ENST00000356396 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
LSS-201ENST00000356396 S4R3F8 94 aa6.89□□□□□ -1.31
LSS-201ENST00000356396 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
LSS-201ENST00000356396 P0C880 135 aa6.87□□□□□ -1.31
LSS-201ENST00000356396 A0A0D9SG42 100 aa6.87□□□□□ -1.31
LSS-201ENST00000356396 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
LSS-201ENST00000356396 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
LSS-201ENST00000356396 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
LSS-201ENST00000356396 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
LSS-201ENST00000356396 H0YAA0 97 aa6.78□□□□□ -1.32
LSS-201ENST00000356396 MIR22HGQ0VDD5 57 aa6.76□□□□□ -1.33
LSS-201ENST00000356396 LINC01554Q52M75 96 aa6.75□□□□□ -1.33
LSS-201ENST00000356396 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
LSS-201ENST00000356396 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
LSS-201ENST00000356396 A0A1B0GU33 70 aa6.74□□□□□ -1.33
LSS-201ENST00000356396 UQCR11O14957 56 aa6.72□□□□□ -1.33
LSS-201ENST00000356396 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
LSS-201ENST00000356396 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
LSS-201ENST00000356396 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
LSS-201ENST00000356396 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
LSS-201ENST00000356396 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
LSS-201ENST00000356396 M0R2T5 61 aa6.58□□□□□ -1.36
LSS-201ENST00000356396 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
LSS-201ENST00000356396 USH2AO75445 5202 aa6.55□□□□□ -1.36
LSS-201ENST00000356396 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
LSS-201ENST00000356396 M0QZ58 72 aa6.52□□□□□ -1.37
LSS-201ENST00000356396 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
LSS-201ENST00000356396 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
LSS-201ENST00000356396 R4GN34 69 aa6.46□□□□□ -1.37
LSS-201ENST00000356396 MT1HP80294 61 aa6.39□□□□□ -1.39
LSS-201ENST00000356396 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
LSS-201ENST00000356396 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
LSS-201ENST00000356396 C10orf95Q9H7T3 257 aa6.34□□□□□ -1.39
LSS-201ENST00000356396 ROMO1P60602 79 aa6.27□□□□□ -1.41
LSS-201ENST00000356396 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
LSS-201ENST00000356396 MT1FP04733 61 aa6.24□□□□□ -1.41
LSS-201ENST00000356396 K7ERS5 55 aa6.23□□□□□ -1.41
LSS-201ENST00000356396 MT2AP02795 61 aa6.18□□□□□ -1.42
LSS-201ENST00000356396 KMT2DO14686 5537 aa6.17□□□□□ -1.42
LSS-201ENST00000356396 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
LSS-201ENST00000356396 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
LSS-201ENST00000356396 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
LSS-201ENST00000356396 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
LSS-201ENST00000356396 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
LSS-201ENST00000356396 LCE2BO14633 110 aa5.88□□□□□ -1.47
LSS-201ENST00000356396 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
LSS-201ENST00000356396 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
LSS-201ENST00000356396 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
LSS-201ENST00000356396 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
LSS-201ENST00000356396 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
LSS-201ENST00000356396 MT1BP07438 61 aa5.85□□□□□ -1.47
LSS-201ENST00000356396 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
LSS-201ENST00000356396 MT1XP80297 61 aa5.7□□□□□ -1.5
LSS-201ENST00000356396 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
LSS-201ENST00000356396 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
LSS-201ENST00000356396 TNP1P09430 55 aa5.65□□□□□ -1.51
LSS-201ENST00000356396 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.51
LSS-201ENST00000356396 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
LSS-201ENST00000356396 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
LSS-201ENST00000356396 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
LSS-201ENST00000356396 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
LSS-201ENST00000356396 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
LSS-201ENST00000356396 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
LSS-201ENST00000356396 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
LSS-201ENST00000356396 MACF1Q9UPN3 7388 aaKnown RBP5.43□□□□□ -1.54
LSS-201ENST00000356396 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
LSS-201ENST00000356396 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.56
LSS-201ENST00000356396 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
LSS-201ENST00000356396 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
LSS-201ENST00000356396 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
LSS-201ENST00000356396 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
LSS-201ENST00000356396 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
LSS-201ENST00000356396 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
LSS-201ENST00000356396 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
LSS-201ENST00000356396 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
LSS-201ENST00000356396 KRTAP19-6Q3LI70 58 aa5.1□□□□□ -1.59
LSS-201ENST00000356396 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
LSS-201ENST00000356396 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
LSS-201ENST00000356396 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
LSS-201ENST00000356396 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms