RNA–Protein interactions for RNA: ENST00000355666.5

TTC3-202, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TTC3, Length 7,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-202ENST00000355666 H0YAA0 97 aa5□□□□□ -1.61
TTC3-202ENST00000355666 HYDINQ4G0P3 5121 aa4.97□□□□□ -1.61
TTC3-202ENST00000355666 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
TTC3-202ENST00000355666 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.61
TTC3-202ENST00000355666 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.61
TTC3-202ENST00000355666 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
TTC3-202ENST00000355666 RYR2Q92736 4967 aa4.94□□□□□ -1.62
TTC3-202ENST00000355666 PKD1P98161 4303 aa4.92□□□□□ -1.62
TTC3-202ENST00000355666 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.62
TTC3-202ENST00000355666 P0C880 135 aa4.89□□□□□ -1.63
TTC3-202ENST00000355666 FAT1Q14517 4588 aa4.88□□□□□ -1.63
TTC3-202ENST00000355666 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
TTC3-202ENST00000355666 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
TTC3-202ENST00000355666 KRTAP3-3Q9BYR6 98 aa4.82□□□□□ -1.64
TTC3-202ENST00000355666 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
TTC3-202ENST00000355666 RYR1P21817 5038 aa4.8□□□□□ -1.64
TTC3-202ENST00000355666 PLAC4Q8WY50 150 aa4.79□□□□□ -1.64
TTC3-202ENST00000355666 PKHD1P08F94 4074 aa4.78□□□□□ -1.64
TTC3-202ENST00000355666 KRTAP3-2Q9BYR7 98 aa4.74□□□□□ -1.65
TTC3-202ENST00000355666 KRTAP17-1Q9BYP8 105 aa4.73□□□□□ -1.65
TTC3-202ENST00000355666 KRTAP13-4Q3LI77 160 aa4.72□□□□□ -1.65
TTC3-202ENST00000355666 RYR3Q15413 4870 aa4.7□□□□□ -1.66
TTC3-202ENST00000355666 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
TTC3-202ENST00000355666 KIAA1109Q2LD37 5005 aa4.7□□□□□ -1.66
TTC3-202ENST00000355666 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
TTC3-202ENST00000355666 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
TTC3-202ENST00000355666 HSPG2P98160 4391 aa4.68□□□□□ -1.66
TTC3-202ENST00000355666 FAT3Q8TDW7 4589 aa4.66□□□□□ -1.66
TTC3-202ENST00000355666 KMT2CQ8NEZ4 4911 aaKnown RBP4.65□□□□□ -1.66
TTC3-202ENST00000355666 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
TTC3-202ENST00000355666 TNP1P09430 55 aa4.62□□□□□ -1.67
TTC3-202ENST00000355666 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
TTC3-202ENST00000355666 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
TTC3-202ENST00000355666 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
TTC3-202ENST00000355666 TNXBP22105 4242 aa4.58□□□□□ -1.68
TTC3-202ENST00000355666 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
TTC3-202ENST00000355666 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
TTC3-202ENST00000355666 H3BS24 57 aa4.49□□□□□ -1.69
TTC3-202ENST00000355666 BIRC6Q9NR09 4857 aa4.49□□□□□ -1.69
TTC3-202ENST00000355666 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
TTC3-202ENST00000355666 EPPK1P58107 5090 aaKnown RBP4.45□□□□□ -1.7
TTC3-202ENST00000355666 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
TTC3-202ENST00000355666 HERC2O95714 4834 aa4.42□□□□□ -1.7
TTC3-202ENST00000355666 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
TTC3-202ENST00000355666 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
TTC3-202ENST00000355666 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
TTC3-202ENST00000355666 LRP2P98164 4655 aa4.33□□□□□ -1.72
TTC3-202ENST00000355666 MT1HP80294 61 aa4.32□□□□□ -1.72
TTC3-202ENST00000355666 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
TTC3-202ENST00000355666 LPAP08519 4548 aa4.28□□□□□ -1.72
TTC3-202ENST00000355666 HERC1Q15751 4861 aa4.25□□□□□ -1.73
TTC3-202ENST00000355666 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
TTC3-202ENST00000355666 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
TTC3-202ENST00000355666 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
TTC3-202ENST00000355666 MT2AP02795 61 aa4.22□□□□□ -1.73
TTC3-202ENST00000355666 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
TTC3-202ENST00000355666 LCE2CQ5TA81 110 aa4.17□□□□□ -1.74
TTC3-202ENST00000355666 MT1FP04733 61 aa4.17□□□□□ -1.74
TTC3-202ENST00000355666 PCLOQ9Y6V0 5065 aa4.16□□□□□ -1.74
TTC3-202ENST00000355666 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
TTC3-202ENST00000355666 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
TTC3-202ENST00000355666 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
TTC3-202ENST00000355666 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
TTC3-202ENST00000355666 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
TTC3-202ENST00000355666 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
TTC3-202ENST00000355666 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
TTC3-202ENST00000355666 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
TTC3-202ENST00000355666 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
TTC3-202ENST00000355666 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
TTC3-202ENST00000355666 MT1BP07438 61 aa3.92□□□□□ -1.78
TTC3-202ENST00000355666 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
TTC3-202ENST00000355666 MT1XP80297 61 aa3.89□□□□□ -1.79
TTC3-202ENST00000355666 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
TTC3-202ENST00000355666 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
TTC3-202ENST00000355666 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
TTC3-202ENST00000355666 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.79
TTC3-202ENST00000355666 MUC2Q02817 5179 aa3.82□□□□□ -1.8
TTC3-202ENST00000355666 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
TTC3-202ENST00000355666 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
TTC3-202ENST00000355666 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
TTC3-202ENST00000355666 LCE2BO14633 110 aa3.74□□□□□ -1.81
TTC3-202ENST00000355666 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
TTC3-202ENST00000355666 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
TTC3-202ENST00000355666 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.82
TTC3-202ENST00000355666 INE1O15225 51 aa3.6□□□□□ -1.83
TTC3-202ENST00000355666 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
TTC3-202ENST00000355666 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
TTC3-202ENST00000355666 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
TTC3-202ENST00000355666 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
TTC3-202ENST00000355666 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
TTC3-202ENST00000355666 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
TTC3-202ENST00000355666 MT1EP04732 61 aa3.44□□□□□ -1.86
TTC3-202ENST00000355666 MT1LQ93083 61 aa3.42□□□□□ -1.86
TTC3-202ENST00000355666 MT1GP13640 62 aa3.4□□□□□ -1.87
TTC3-202ENST00000355666 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
TTC3-202ENST00000355666 USH2AO75445 5202 aa3.38□□□□□ -1.87
TTC3-202ENST00000355666 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
TTC3-202ENST00000355666 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
TTC3-202ENST00000355666 KRTAP9-2Q9BYQ4 174 aa3.29□□□□□ -1.88
TTC3-202ENST00000355666 SPRR2EP22531 72 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms