RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
COMMD9-202ENST00000355500 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
COMMD9-202ENST00000355500 ANAPC11Q9NYG5 84 aa4.65□□□□□ -1.66
COMMD9-202ENST00000355500 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
COMMD9-202ENST00000355500 SPINK6Q6UWN8 80 aa4.63□□□□□ -1.67
COMMD9-202ENST00000355500 KRTAP1-4P0C5Y4 121 aa4.62□□□□□ -1.67
COMMD9-202ENST00000355500 Q5VSD8 79 aa4.61□□□□□ -1.67
COMMD9-202ENST00000355500 KRTAP13-2Q52LG2 175 aa4.61□□□□□ -1.67
COMMD9-202ENST00000355500 A0A1B0GU69 56 aa4.59□□□□□ -1.67
COMMD9-202ENST00000355500 A0A1B0GU33 70 aa4.59□□□□□ -1.68
COMMD9-202ENST00000355500 SPINK1P00995 79 aa4.59□□□□□ -1.68
COMMD9-202ENST00000355500 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
COMMD9-202ENST00000355500 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
COMMD9-202ENST00000355500 KRTAP10-4P60372 401 aaPredicted RBP4.56□□□□□ -1.68
COMMD9-202ENST00000355500 PCOTHQ58A44 107 aa4.54□□□□□ -1.68
COMMD9-202ENST00000355500 MYCBP2O75592 4640 aa4.53□□□□□ -1.68
COMMD9-202ENST00000355500 FAT1Q14517 4588 aa4.53□□□□□ -1.68
COMMD9-202ENST00000355500 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
COMMD9-202ENST00000355500 HRES1P13985 223 aa4.51□□□□□ -1.69
COMMD9-202ENST00000355500 KRTAP3-1Q9BYR8 98 aa4.51□□□□□ -1.69
COMMD9-202ENST00000355500 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
COMMD9-202ENST00000355500 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
COMMD9-202ENST00000355500 IGKV2-30P06310 120 aa4.46□□□□□ -1.69
COMMD9-202ENST00000355500 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
COMMD9-202ENST00000355500 ACYP2P14621 99 aa4.42□□□□□ -1.7
COMMD9-202ENST00000355500 R4GN34 69 aa4.42□□□□□ -1.7
COMMD9-202ENST00000355500 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
COMMD9-202ENST00000355500 MT1HL1P0DM35 61 aa4.41□□□□□ -1.7
COMMD9-202ENST00000355500 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
COMMD9-202ENST00000355500 HERC1Q15751 4861 aa4.4□□□□□ -1.7
COMMD9-202ENST00000355500 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.71
COMMD9-202ENST00000355500 TNXBP22105 4242 aa4.4□□□□□ -1.71
COMMD9-202ENST00000355500 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
COMMD9-202ENST00000355500 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
COMMD9-202ENST00000355500 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
COMMD9-202ENST00000355500 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
COMMD9-202ENST00000355500 FLG2Q5D862 2391 aaPredicted RBP4.3□□□□□ -1.72
COMMD9-202ENST00000355500 C9orf92A6NGG3 77 aa4.23□□□□□ -1.73
COMMD9-202ENST00000355500 RPL37P61927 97 aaKnown RBP4.23□□□□□ -1.73
COMMD9-202ENST00000355500 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
COMMD9-202ENST00000355500 MUC17Q685J3 4493 aa4.18□□□□□ -1.74
COMMD9-202ENST00000355500 H0YAA0 97 aa4.17□□□□□ -1.74
COMMD9-202ENST00000355500 XP32Q5T750 250 aa4.17□□□□□ -1.74
COMMD9-202ENST00000355500 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
COMMD9-202ENST00000355500 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
COMMD9-202ENST00000355500 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
COMMD9-202ENST00000355500 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
COMMD9-202ENST00000355500 LPAP08519 4548 aa4.07□□□□□ -1.76
COMMD9-202ENST00000355500 LRP2P98164 4655 aa4.05□□□□□ -1.76
COMMD9-202ENST00000355500 H1FX-AS1Q4G0G2 97 aa4.03□□□□□ -1.76
COMMD9-202ENST00000355500 S4R3F8 94 aa4.03□□□□□ -1.76
COMMD9-202ENST00000355500 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
COMMD9-202ENST00000355500 INE1O15225 51 aa4.01□□□□□ -1.77
COMMD9-202ENST00000355500 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
COMMD9-202ENST00000355500 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
COMMD9-202ENST00000355500 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
COMMD9-202ENST00000355500 M0QZ58 72 aa3.87□□□□□ -1.79
COMMD9-202ENST00000355500 MUC2Q02817 5179 aa3.87□□□□□ -1.79
COMMD9-202ENST00000355500 A0A0D9SG42 100 aa3.83□□□□□ -1.8
COMMD9-202ENST00000355500 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
COMMD9-202ENST00000355500 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
COMMD9-202ENST00000355500 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
COMMD9-202ENST00000355500 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
COMMD9-202ENST00000355500 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
COMMD9-202ENST00000355500 MT1HP80294 61 aa3.74□□□□□ -1.81
COMMD9-202ENST00000355500 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
COMMD9-202ENST00000355500 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
COMMD9-202ENST00000355500 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
COMMD9-202ENST00000355500 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
COMMD9-202ENST00000355500 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
COMMD9-202ENST00000355500 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
COMMD9-202ENST00000355500 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
COMMD9-202ENST00000355500 KRTAP9-8Q9BYQ0 159 aa3.55□□□□□ -1.84
COMMD9-202ENST00000355500 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
COMMD9-202ENST00000355500 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
COMMD9-202ENST00000355500 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
COMMD9-202ENST00000355500 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
COMMD9-202ENST00000355500 M0R2T5 61 aa3.51□□□□□ -1.85
COMMD9-202ENST00000355500 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
COMMD9-202ENST00000355500 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
COMMD9-202ENST00000355500 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
COMMD9-202ENST00000355500 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
COMMD9-202ENST00000355500 MT2AP02795 61 aa3.45□□□□□ -1.86
COMMD9-202ENST00000355500 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
COMMD9-202ENST00000355500 KRTAP19-1Q8IUB9 90 aa3.43□□□□□ -1.86
COMMD9-202ENST00000355500 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
COMMD9-202ENST00000355500 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
COMMD9-202ENST00000355500 TNP1P09430 55 aa3.39□□□□□ -1.87
COMMD9-202ENST00000355500 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
COMMD9-202ENST00000355500 MT1FP04733 61 aa3.38□□□□□ -1.87
COMMD9-202ENST00000355500 USH2AO75445 5202 aa3.35□□□□□ -1.87
COMMD9-202ENST00000355500 KRTAP10-10P60014 251 aa3.35□□□□□ -1.87
COMMD9-202ENST00000355500 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.88
COMMD9-202ENST00000355500 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
COMMD9-202ENST00000355500 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
COMMD9-202ENST00000355500 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
COMMD9-202ENST00000355500 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
COMMD9-202ENST00000355500 MT1BP07438 61 aa3.28□□□□□ -1.88
COMMD9-202ENST00000355500 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
COMMD9-202ENST00000355500 MT1XP80297 61 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms