RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 H3BS24 57 aa5.1□□□□□ -1.59
RPE-201ENST00000354506 FAT3Q8TDW7 4589 aa5.09□□□□□ -1.59
RPE-201ENST00000354506 J3QL48 77 aa5.09□□□□□ -1.59
RPE-201ENST00000354506 KRTAP21-3Q3LHN1 58 aa5.09□□□□□ -1.59
RPE-201ENST00000354506 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
RPE-201ENST00000354506 RYR2Q92736 4967 aa5.07□□□□□ -1.6
RPE-201ENST00000354506 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
RPE-201ENST00000354506 HSPG2P98160 4391 aa5.04□□□□□ -1.6
RPE-201ENST00000354506 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
RPE-201ENST00000354506 LCE2CQ5TA81 110 aa5□□□□□ -1.61
RPE-201ENST00000354506 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
RPE-201ENST00000354506 KMT2CQ8NEZ4 4911 aaKnown RBP4.99□□□□□ -1.61
RPE-201ENST00000354506 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
RPE-201ENST00000354506 KRTAP13-4Q3LI77 160 aa4.98□□□□□ -1.61
RPE-201ENST00000354506 KRTAP10-8P60410 259 aa4.97□□□□□ -1.61
RPE-201ENST00000354506 K7ERS5 55 aa4.94□□□□□ -1.62
RPE-201ENST00000354506 LPAP08519 4548 aa4.94□□□□□ -1.62
RPE-201ENST00000354506 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
RPE-201ENST00000354506 P0C880 135 aa4.92□□□□□ -1.62
RPE-201ENST00000354506 ROMO1P60602 79 aa4.92□□□□□ -1.62
RPE-201ENST00000354506 RPL37P61927 97 aaKnown RBP4.91□□□□□ -1.62
RPE-201ENST00000354506 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
RPE-201ENST00000354506 XP32Q5T750 250 aa4.88□□□□□ -1.63
RPE-201ENST00000354506 RYR1P21817 5038 aa4.86□□□□□ -1.63
RPE-201ENST00000354506 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
RPE-201ENST00000354506 LRP2P98164 4655 aa4.86□□□□□ -1.63
RPE-201ENST00000354506 TPRXLQ17RH7 258 aa4.86□□□□□ -1.63
RPE-201ENST00000354506 RYR3Q15413 4870 aa4.84□□□□□ -1.64
RPE-201ENST00000354506 S4R3F8 94 aa4.83□□□□□ -1.64
RPE-201ENST00000354506 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
RPE-201ENST00000354506 Q5VSD8 79 aa4.82□□□□□ -1.64
RPE-201ENST00000354506 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
RPE-201ENST00000354506 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
RPE-201ENST00000354506 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
RPE-201ENST00000354506 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
RPE-201ENST00000354506 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
RPE-201ENST00000354506 ABCA13Q86UQ4 5058 aa4.68□□□□□ -1.66
RPE-201ENST00000354506 KRTAP12-1P59990 96 aa4.68□□□□□ -1.66
RPE-201ENST00000354506 M0QZ58 72 aa4.64□□□□□ -1.67
RPE-201ENST00000354506 MUC2Q02817 5179 aa4.64□□□□□ -1.67
RPE-201ENST00000354506 EPPK1P58107 5090 aaKnown RBP4.63□□□□□ -1.67
RPE-201ENST00000354506 MUC17Q685J3 4493 aa4.62□□□□□ -1.67
RPE-201ENST00000354506 R4GN34 69 aa4.58□□□□□ -1.68
RPE-201ENST00000354506 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
RPE-201ENST00000354506 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
RPE-201ENST00000354506 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
RPE-201ENST00000354506 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
RPE-201ENST00000354506 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
RPE-201ENST00000354506 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
RPE-201ENST00000354506 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
RPE-201ENST00000354506 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
RPE-201ENST00000354506 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
RPE-201ENST00000354506 HERC2O95714 4834 aa4.34□□□□□ -1.71
RPE-201ENST00000354506 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
RPE-201ENST00000354506 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
RPE-201ENST00000354506 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
RPE-201ENST00000354506 HERC1Q15751 4861 aa4.28□□□□□ -1.72
RPE-201ENST00000354506 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
RPE-201ENST00000354506 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
RPE-201ENST00000354506 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
RPE-201ENST00000354506 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
RPE-201ENST00000354506 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
RPE-201ENST00000354506 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
RPE-201ENST00000354506 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.74
RPE-201ENST00000354506 M0R2T5 61 aa4.13□□□□□ -1.75
RPE-201ENST00000354506 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
RPE-201ENST00000354506 TNP1P09430 55 aa4.12□□□□□ -1.75
RPE-201ENST00000354506 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
RPE-201ENST00000354506 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
RPE-201ENST00000354506 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
RPE-201ENST00000354506 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
RPE-201ENST00000354506 KRTAP9-6A0A140TA67 174 aa4.06□□□□□ -1.76
RPE-201ENST00000354506 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
RPE-201ENST00000354506 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
RPE-201ENST00000354506 MT1HP80294 61 aa4□□□□□ -1.77
RPE-201ENST00000354506 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
RPE-201ENST00000354506 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
RPE-201ENST00000354506 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
RPE-201ENST00000354506 MT1FP04733 61 aa3.94□□□□□ -1.78
RPE-201ENST00000354506 MT2AP02795 61 aa3.94□□□□□ -1.78
RPE-201ENST00000354506 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
RPE-201ENST00000354506 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
RPE-201ENST00000354506 LCE3BQ5TA77 95 aa3.93□□□□□ -1.78
RPE-201ENST00000354506 KRTAP4-8A0A0G2JLE6 195 aa3.92□□□□□ -1.78
RPE-201ENST00000354506 USH2AO75445 5202 aa3.91□□□□□ -1.78
RPE-201ENST00000354506 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
RPE-201ENST00000354506 KMT2DO14686 5537 aa3.88□□□□□ -1.79
RPE-201ENST00000354506 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
RPE-201ENST00000354506 MT1BP07438 61 aa3.85□□□□□ -1.79
RPE-201ENST00000354506 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
RPE-201ENST00000354506 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
RPE-201ENST00000354506 MT1XP80297 61 aa3.83□□□□□ -1.8
RPE-201ENST00000354506 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
RPE-201ENST00000354506 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
RPE-201ENST00000354506 KRTAP9-3Q9BYQ3 159 aa3.78□□□□□ -1.8
RPE-201ENST00000354506 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
RPE-201ENST00000354506 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
RPE-201ENST00000354506 KRTAP10-12P60413 245 aa3.71□□□□□ -1.81
RPE-201ENST00000354506 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
RPE-201ENST00000354506 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms