RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 A0A1B0GU33 70 aa11.56□□□□□ -0.56
NKX2-4-201ENST00000351817 H1FX-AS1Q4G0G2 97 aa11.52□□□□□ -0.56
NKX2-4-201ENST00000351817 FAT3Q8TDW7 4589 aa11.51□□□□□ -0.57
NKX2-4-201ENST00000351817 KIAA1109Q2LD37 5005 aa11.5□□□□□ -0.57
NKX2-4-201ENST00000351817 RPL37P61927 97 aaKnown RBP11.43□□□□□ -0.58
NKX2-4-201ENST00000351817 EPPK1P58107 5090 aaKnown RBP11.41□□□□□ -0.58
NKX2-4-201ENST00000351817 XP32Q5T750 250 aa11.35□□□□□ -0.59
NKX2-4-201ENST00000351817 MT1HL1P0DM35 61 aa11.33□□□□□ -0.59
NKX2-4-201ENST00000351817 CSAG1Q6PB30 78 aa11.33□□□□□ -0.59
NKX2-4-201ENST00000351817 MYCBP2O75592 4640 aa11.32□□□□□ -0.6
NKX2-4-201ENST00000351817 DMBT1Q9UGM3 2413 aaPredicted RBP11.31□□□□□ -0.6
NKX2-4-201ENST00000351817 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
NKX2-4-201ENST00000351817 K7ERS5 55 aa11.22□□□□□ -0.61
NKX2-4-201ENST00000351817 S4R3F8 94 aa11.21□□□□□ -0.62
NKX2-4-201ENST00000351817 KRTAP10-6P60371 365 aaPredicted RBP11.2□□□□□ -0.62
NKX2-4-201ENST00000351817 KRTAP4-5Q9BYR2 181 aa11.12□□□□□ -0.63
NKX2-4-201ENST00000351817 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
NKX2-4-201ENST00000351817 KRTAP25-1Q3LHN0 102 aa11.07□□□□□ -0.64
NKX2-4-201ENST00000351817 KRTAP13-4Q3LI77 160 aa11.05□□□□□ -0.64
NKX2-4-201ENST00000351817 ROMO1P60602 79 aa11.01□□□□□ -0.65
NKX2-4-201ENST00000351817 A0A0D9SG42 100 aa10.96□□□□□ -0.65
NKX2-4-201ENST00000351817 P0C880 135 aa10.96□□□□□ -0.65
NKX2-4-201ENST00000351817 TPRXLQ17RH7 258 aa10.96□□□□□ -0.65
NKX2-4-201ENST00000351817 ABCA13Q86UQ4 5058 aa10.92□□□□□ -0.66
NKX2-4-201ENST00000351817 LRP2P98164 4655 aa10.86□□□□□ -0.67
NKX2-4-201ENST00000351817 LPAP08519 4548 aa10.84□□□□□ -0.67
NKX2-4-201ENST00000351817 CRIPTQ9P021 101 aa10.83□□□□□ -0.68
NKX2-4-201ENST00000351817 HERC2O95714 4834 aa10.73□□□□□ -0.69
NKX2-4-201ENST00000351817 KRTAP12-2P59991 146 aa10.7□□□□□ -0.7
NKX2-4-201ENST00000351817 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
NKX2-4-201ENST00000351817 M0QZ58 72 aa10.68□□□□□ -0.7
NKX2-4-201ENST00000351817 J3QL48 77 aa10.67□□□□□ -0.7
NKX2-4-201ENST00000351817 KRTAP12-1P59990 96 aa10.65□□□□□ -0.7
NKX2-4-201ENST00000351817 SPINT4Q6UDR6 99 aa10.61□□□□□ -0.71
NKX2-4-201ENST00000351817 SEC61BP60468 96 aaKnown RBP10.56□□□□□ -0.72
NKX2-4-201ENST00000351817 C10orf95Q9H7T3 257 aa10.48□□□□□ -0.73
NKX2-4-201ENST00000351817 MUC17Q685J3 4493 aa10.44□□□□□ -0.74
NKX2-4-201ENST00000351817 KRTAP4-1Q9BYQ7 146 aa10.42□□□□□ -0.74
NKX2-4-201ENST00000351817 R4GN34 69 aa10.39□□□□□ -0.75
NKX2-4-201ENST00000351817 PCLOQ9Y6V0 5065 aa10.3□□□□□ -0.76
NKX2-4-201ENST00000351817 LORP23490 312 aaPredicted RBP10.22□□□□□ -0.77
NKX2-4-201ENST00000351817 KRTAP15-1Q3LI76 137 aa10.22□□□□□ -0.77
NKX2-4-201ENST00000351817 KRTAP19-2Q3LHN2 52 aa10.21□□□□□ -0.78
NKX2-4-201ENST00000351817 HERC1Q15751 4861 aa10.2□□□□□ -0.78
NKX2-4-201ENST00000351817 HMCN2Q8NDA2 5059 aa10.13□□□□□ -0.79
NKX2-4-201ENST00000351817 NDUFAF8A1L188 74 aa10.13□□□□□ -0.79
NKX2-4-201ENST00000351817 MUC2Q02817 5179 aa10.09□□□□□ -0.79
NKX2-4-201ENST00000351817 A0A0A0MQY5 61 aa9.95□□□□□ -0.82
NKX2-4-201ENST00000351817 FLGP20930 4061 aaPredicted RBP9.89□□□□□ -0.83
NKX2-4-201ENST00000351817 CAMK2N1Q7Z7J9 78 aa9.86□□□□□ -0.83
NKX2-4-201ENST00000351817 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
NKX2-4-201ENST00000351817 PP632Q6XCG6 107 aa9.73□□□□□ -0.85
NKX2-4-201ENST00000351817 PLAC4Q8WY50 150 aa9.68□□□□□ -0.86
NKX2-4-201ENST00000351817 UBR4Q5T4S7 5183 aa9.66□□□□□ -0.86
NKX2-4-201ENST00000351817 FAT4Q6V0I7 4981 aa9.65□□□□□ -0.87
NKX2-4-201ENST00000351817 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
NKX2-4-201ENST00000351817 LUZP6Q538Z0 58 aa9.63□□□□□ -0.87
NKX2-4-201ENST00000351817 TNP1P09430 55 aa9.52□□□□□ -0.89
NKX2-4-201ENST00000351817 MT1HP80294 61 aa9.5□□□□□ -0.89
NKX2-4-201ENST00000351817 KRTAP23-1A1A580 65 aa9.44□□□□□ -0.9
NKX2-4-201ENST00000351817 SPRR2GQ9BYE4 73 aa9.44□□□□□ -0.9
NKX2-4-201ENST00000351817 M0R2T5 61 aa9.41□□□□□ -0.9
NKX2-4-201ENST00000351817 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
NKX2-4-201ENST00000351817 MT2AP02795 61 aa9.24□□□□□ -0.93
NKX2-4-201ENST00000351817 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
NKX2-4-201ENST00000351817 MT1FP04733 61 aa9.23□□□□□ -0.93
NKX2-4-201ENST00000351817 KRTAP10-10P60014 251 aa9.17□□□□□ -0.94
NKX2-4-201ENST00000351817 SPRR5A0A1B0GTR4 108 aa9.04□□□□□ -0.96
NKX2-4-201ENST00000351817 KRTAP19-8Q3LI54 63 aa9.03□□□□□ -0.96
NKX2-4-201ENST00000351817 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
NKX2-4-201ENST00000351817 MT1BP07438 61 aa8.88□□□□□ -0.99
NKX2-4-201ENST00000351817 KRTAP9-3Q9BYQ3 159 aa8.87□□□□□ -0.99
NKX2-4-201ENST00000351817 KRTAP10-5P60370 271 aa8.82□□□□□ -1
NKX2-4-201ENST00000351817 MT1XP80297 61 aa8.81□□□□□ -1
NKX2-4-201ENST00000351817 KRTAP8-1Q8IUC2 63 aa8.8□□□□□ -1
NKX2-4-201ENST00000351817 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
NKX2-4-201ENST00000351817 KRTAP10-12P60413 245 aa8.65□□□□□ -1.02
NKX2-4-201ENST00000351817 PRO2289Q9P1D8 64 aa8.62□□□□□ -1.03
NKX2-4-201ENST00000351817 LCE2BO14633 110 aa8.58□□□□□ -1.04
NKX2-4-201ENST00000351817 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
NKX2-4-201ENST00000351817 KRTAP12-3P60328 96 aa8.57□□□□□ -1.04
NKX2-4-201ENST00000351817 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
NKX2-4-201ENST00000351817 INE1O15225 51 aa8.45□□□□□ -1.06
NKX2-4-201ENST00000351817 USH2AO75445 5202 aa8.35□□□□□ -1.07
NKX2-4-201ENST00000351817 KRTAP19-5Q3LI72 72 aa8.2□□□□□ -1.1
NKX2-4-201ENST00000351817 LCE3CQ5T5A8 94 aa8.07□□□□□ -1.12
NKX2-4-201ENST00000351817 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
NKX2-4-201ENST00000351817 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
NKX2-4-201ENST00000351817 KMT2DO14686 5537 aa7.98□□□□□ -1.13
NKX2-4-201ENST00000351817 SSPOA2VEC9 5147 aa7.97□□□□□ -1.13
NKX2-4-201ENST00000351817 KRTAP19-6Q3LI70 58 aa7.85□□□□□ -1.15
NKX2-4-201ENST00000351817 KRTAP19-7Q3SYF9 63 aa7.85□□□□□ -1.15
NKX2-4-201ENST00000351817 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
NKX2-4-201ENST00000351817 FSIP2Q5CZC0 6907 aa7.74□□□□□ -1.17
NKX2-4-201ENST00000351817 KRTAP9-6A8MVA2 160 aa7.73□□□□□ -1.17
NKX2-4-201ENST00000351817 MT1EP04732 61 aa7.64□□□□□ -1.19
NKX2-4-201ENST00000351817 MT1LQ93083 61 aa7.64□□□□□ -1.19
NKX2-4-201ENST00000351817 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
NKX2-4-201ENST00000351817 KRTAP2-3P0C7H8 128 aa7.51□□□□□ -1.21
NKX2-4-201ENST00000351817 KRTAP2-4Q9BYR9 128 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms