RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
CNTFR-201ENST00000351266 MIR22HGQ0VDD5 57 aa11.72□□□□□ -0.53
CNTFR-201ENST00000351266 BIRC6Q9NR09 4857 aa11.69□□□□□ -0.54
CNTFR-201ENST00000351266 J3QL48 77 aa11.64□□□□□ -0.55
CNTFR-201ENST00000351266 S4R3F8 94 aa11.61□□□□□ -0.55
CNTFR-201ENST00000351266 A6NN06 94 aa11.58□□□□□ -0.55
CNTFR-201ENST00000351266 H1FX-AS1Q4G0G2 97 aa11.57□□□□□ -0.56
CNTFR-201ENST00000351266 RBM12B-AS1Q9P1G2 102 aa11.56□□□□□ -0.56
CNTFR-201ENST00000351266 A0A1B0GU33 70 aa11.55□□□□□ -0.56
CNTFR-201ENST00000351266 KRTAP3-3Q9BYR6 98 aa11.55□□□□□ -0.56
CNTFR-201ENST00000351266 SEC61BP60468 96 aaKnown RBP11.51□□□□□ -0.57
CNTFR-201ENST00000351266 HERC2O95714 4834 aa11.45□□□□□ -0.58
CNTFR-201ENST00000351266 KTN1-AS1Q86SY8 53 aa11.44□□□□□ -0.58
CNTFR-201ENST00000351266 H0YAA0 97 aa11.42□□□□□ -0.58
CNTFR-201ENST00000351266 LRP2P98164 4655 aa11.42□□□□□ -0.58
CNTFR-201ENST00000351266 ABCA13Q86UQ4 5058 aa11.41□□□□□ -0.58
CNTFR-201ENST00000351266 LPAP08519 4548 aa11.35□□□□□ -0.59
CNTFR-201ENST00000351266 KRTAP10-6P60371 365 aaPredicted RBP11.32□□□□□ -0.6
CNTFR-201ENST00000351266 CSAG1Q6PB30 78 aa11.31□□□□□ -0.6
CNTFR-201ENST00000351266 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.6
CNTFR-201ENST00000351266 K7ERS5 55 aa11.16□□□□□ -0.62
CNTFR-201ENST00000351266 ADM2Q7Z4H4 148 aa11.15□□□□□ -0.62
CNTFR-201ENST00000351266 P0C880 135 aa11.13□□□□□ -0.63
CNTFR-201ENST00000351266 PCLOQ9Y6V0 5065 aa11.11□□□□□ -0.63
CNTFR-201ENST00000351266 KRTAP4-1Q9BYQ7 146 aa11.11□□□□□ -0.63
CNTFR-201ENST00000351266 KRTAP13-4Q3LI77 160 aa11.06□□□□□ -0.64
CNTFR-201ENST00000351266 MUC17Q685J3 4493 aa11.05□□□□□ -0.64
CNTFR-201ENST00000351266 M0QZ58 72 aa10.97□□□□□ -0.65
CNTFR-201ENST00000351266 A0A0D9SG42 100 aa10.94□□□□□ -0.66
CNTFR-201ENST00000351266 KRTAP19-2Q3LHN2 52 aa10.92□□□□□ -0.66
CNTFR-201ENST00000351266 PRAC1Q96KF2 57 aa10.9□□□□□ -0.67
CNTFR-201ENST00000351266 R4GN34 69 aa10.74□□□□□ -0.69
CNTFR-201ENST00000351266 ROMO1P60602 79 aa10.74□□□□□ -0.69
CNTFR-201ENST00000351266 HERC1Q15751 4861 aa10.72□□□□□ -0.69
CNTFR-201ENST00000351266 HMCN2Q8NDA2 5059 aa10.71□□□□□ -0.69
CNTFR-201ENST00000351266 KRTAP12-1P59990 96 aa10.7□□□□□ -0.7
CNTFR-201ENST00000351266 KRTAP12-2P59991 146 aa10.7□□□□□ -0.7
CNTFR-201ENST00000351266 SPINT4Q6UDR6 99 aa10.68□□□□□ -0.7
CNTFR-201ENST00000351266 KRTAP25-1Q3LHN0 102 aa10.57□□□□□ -0.72
CNTFR-201ENST00000351266 LINC01554Q52M75 96 aa10.54□□□□□ -0.72
CNTFR-201ENST00000351266 FLGP20930 4061 aaPredicted RBP10.54□□□□□ -0.72
CNTFR-201ENST00000351266 LORP23490 312 aaPredicted RBP10.53□□□□□ -0.72
CNTFR-201ENST00000351266 MUC2Q02817 5179 aa10.48□□□□□ -0.73
CNTFR-201ENST00000351266 CRIPTQ9P021 101 aa10.46□□□□□ -0.73
CNTFR-201ENST00000351266 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
CNTFR-201ENST00000351266 M0R2T5 61 aa10.24□□□□□ -0.77
CNTFR-201ENST00000351266 MT1HP80294 61 aa10.23□□□□□ -0.77
CNTFR-201ENST00000351266 RNF213Q63HN8 5207 aa10.16□□□□□ -0.78
CNTFR-201ENST00000351266 CAMK2N1Q7Z7J9 78 aa10.14□□□□□ -0.79
CNTFR-201ENST00000351266 C10orf95Q9H7T3 257 aa10.13□□□□□ -0.79
CNTFR-201ENST00000351266 UBR4Q5T4S7 5183 aa10.11□□□□□ -0.79
CNTFR-201ENST00000351266 SPRR2GQ9BYE4 73 aa10.05□□□□□ -0.8
CNTFR-201ENST00000351266 FAT4Q6V0I7 4981 aa10.02□□□□□ -0.8
CNTFR-201ENST00000351266 MT2AP02795 61 aa9.95□□□□□ -0.82
CNTFR-201ENST00000351266 KRTAP10-10P60014 251 aa9.93□□□□□ -0.82
CNTFR-201ENST00000351266 KRTAP19-1Q8IUB9 90 aa9.93□□□□□ -0.82
CNTFR-201ENST00000351266 KRTAP9-8Q9BYQ0 159 aa9.92□□□□□ -0.82
CNTFR-201ENST00000351266 MT1FP04733 61 aa9.9□□□□□ -0.83
CNTFR-201ENST00000351266 PLAC4Q8WY50 150 aa9.9□□□□□ -0.83
CNTFR-201ENST00000351266 PP632Q6XCG6 107 aa9.79□□□□□ -0.84
CNTFR-201ENST00000351266 TNP1P09430 55 aa9.74□□□□□ -0.85
CNTFR-201ENST00000351266 KRTAP19-8Q3LI54 63 aa9.7□□□□□ -0.86
CNTFR-201ENST00000351266 KRTAP23-1A1A580 65 aa9.63□□□□□ -0.87
CNTFR-201ENST00000351266 KRTAP9-3Q9BYQ3 159 aa9.54□□□□□ -0.88
CNTFR-201ENST00000351266 MT1BP07438 61 aa9.49□□□□□ -0.89
CNTFR-201ENST00000351266 KRTAP15-1Q3LI76 137 aa9.47□□□□□ -0.89
CNTFR-201ENST00000351266 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
CNTFR-201ENST00000351266 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
CNTFR-201ENST00000351266 MT1XP80297 61 aa9.31□□□□□ -0.92
CNTFR-201ENST00000351266 PRO2289Q9P1D8 64 aa9.24□□□□□ -0.93
CNTFR-201ENST00000351266 LCE2BO14633 110 aa9.17□□□□□ -0.94
CNTFR-201ENST00000351266 LCE3AQ5TA76 89 aa9.17□□□□□ -0.94
CNTFR-201ENST00000351266 KRTAP10-12P60413 245 aa9.05□□□□□ -0.96
CNTFR-201ENST00000351266 KRTAP8-1Q8IUC2 63 aa9.04□□□□□ -0.96
CNTFR-201ENST00000351266 NDUFAF8A1L188 74 aa8.99□□□□□ -0.97
CNTFR-201ENST00000351266 KRTAP10-7P60409 375 aaPredicted RBP8.96□□□□□ -0.97
CNTFR-201ENST00000351266 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
CNTFR-201ENST00000351266 SPRR5A0A1B0GTR4 108 aa8.84□□□□□ -1
CNTFR-201ENST00000351266 KRTAP12-3P60328 96 aa8.82□□□□□ -1
CNTFR-201ENST00000351266 H3BS24 57 aa8.78□□□□□ -1
CNTFR-201ENST00000351266 USH2AO75445 5202 aa8.7□□□□□ -1.02
CNTFR-201ENST00000351266 KRTAP19-5Q3LI72 72 aa8.54□□□□□ -1.04
CNTFR-201ENST00000351266 KRTAP19-6Q3LI70 58 aa8.52□□□□□ -1.05
CNTFR-201ENST00000351266 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
CNTFR-201ENST00000351266 KRTAP4-8A0A0G2JLE6 195 aa8.46□□□□□ -1.06
CNTFR-201ENST00000351266 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
CNTFR-201ENST00000351266 SSPOA2VEC9 5147 aa8.41□□□□□ -1.06
CNTFR-201ENST00000351266 KRTAP9-2Q9BYQ4 174 aa8.37□□□□□ -1.07
CNTFR-201ENST00000351266 KRTAP19-7Q3SYF9 63 aa8.3□□□□□ -1.08
CNTFR-201ENST00000351266 FSIP2Q5CZC0 6907 aa8.29□□□□□ -1.08
CNTFR-201ENST00000351266 LCE3CQ5T5A8 94 aa8.27□□□□□ -1.09
CNTFR-201ENST00000351266 KRTAP19-4Q3LI73 84 aa8.27□□□□□ -1.09
CNTFR-201ENST00000351266 KMT2DO14686 5537 aa8.24□□□□□ -1.09
CNTFR-201ENST00000351266 MT1EP04732 61 aa8.13□□□□□ -1.11
CNTFR-201ENST00000351266 A0A0A0MQY5 61 aa8.09□□□□□ -1.11
CNTFR-201ENST00000351266 MT1LQ93083 61 aa8.05□□□□□ -1.12
CNTFR-201ENST00000351266 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
CNTFR-201ENST00000351266 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
CNTFR-201ENST00000351266 KRTAP9-6A0A140TA67 174 aa7.84□□□□□ -1.15
CNTFR-201ENST00000351266 KRTAP4-7Q9BYR0 210 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms