RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 KRTAP19-1Q8IUB9 90 aa10.15□□□□□ -0.78
SNX3-202ENST00000349379 H3BPC8 53 aa10.14□□□□□ -0.79
SNX3-202ENST00000349379 MT-ATP8P03928 68 aa10.13□□□□□ -0.79
SNX3-202ENST00000349379 A8MUN3 132 aa10.12□□□□□ -0.79
SNX3-202ENST00000349379 SCGB1A1P11684 91 aa10.11□□□□□ -0.79
SNX3-202ENST00000349379 FAM236AA0A1B0GUQ0 79 aa10.09□□□□□ -0.79
SNX3-202ENST00000349379 FAM236BA0A1B0GV22 79 aa10.09□□□□□ -0.79
SNX3-202ENST00000349379 SYNE2Q8WXH0 6885 aaKnown RBP10.06□□□□□ -0.8
SNX3-202ENST00000349379 KRTAP19-6Q3LI70 58 aa10.05□□□□□ -0.8
SNX3-202ENST00000349379 FCGBPQ9Y6R7 5405 aaPredicted RBP10.05□□□□□ -0.8
SNX3-202ENST00000349379 NDUFC1O43677 76 aa10.01□□□□□ -0.81
SNX3-202ENST00000349379 SPRR2GQ9BYE4 73 aa9.99□□□□□ -0.81
SNX3-202ENST00000349379 MACF1Q9UPN3 7388 aaKnown RBP9.95□□□□□ -0.82
SNX3-202ENST00000349379 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
SNX3-202ENST00000349379 TRAV7A0A075B6U4 112 aa9.94□□□□□ -0.82
SNX3-202ENST00000349379 H0YAA0 97 aa9.94□□□□□ -0.82
SNX3-202ENST00000349379 DMAC1Q96GE9 116 aa9.93□□□□□ -0.82
SNX3-202ENST00000349379 KRTAP19-8Q3LI54 63 aa9.9□□□□□ -0.82
SNX3-202ENST00000349379 MT1BP07438 61 aa9.87□□□□□ -0.83
SNX3-202ENST00000349379 CRIPTQ9P021 101 aa9.87□□□□□ -0.83
SNX3-202ENST00000349379 Q5VV11 94 aa9.82□□□□□ -0.84
SNX3-202ENST00000349379 ADM2Q7Z4H4 148 aa9.77□□□□□ -0.85
SNX3-202ENST00000349379 SNURFQ9Y675 71 aa9.69□□□□□ -0.86
SNX3-202ENST00000349379 ACYP2P14621 99 aa9.68□□□□□ -0.86
SNX3-202ENST00000349379 SERP2Q8N6R1 65 aa9.68□□□□□ -0.86
SNX3-202ENST00000349379 P0C880 135 aa9.61□□□□□ -0.87
SNX3-202ENST00000349379 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
SNX3-202ENST00000349379 A6NN06 94 aa9.6□□□□□ -0.87
SNX3-202ENST00000349379 KRTAP10-5P60370 271 aa9.59□□□□□ -0.87
SNX3-202ENST00000349379 SPANXA2-OT1Q8N9U9 137 aa9.59□□□□□ -0.87
SNX3-202ENST00000349379 NEBP20929 6669 aa9.57□□□□□ -0.88
SNX3-202ENST00000349379 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
SNX3-202ENST00000349379 R4GN34 69 aa9.49□□□□□ -0.89
SNX3-202ENST00000349379 CHKB-CPT1BH3BT56 60 aa9.46□□□□□ -0.9
SNX3-202ENST00000349379 COX7CP15954 63 aa9.44□□□□□ -0.9
SNX3-202ENST00000349379 KRTAP6-3Q3LI67 103 aa9.44□□□□□ -0.9
SNX3-202ENST00000349379 M0QZ58 72 aa9.43□□□□□ -0.9
SNX3-202ENST00000349379 PLAC4Q8WY50 150 aa9.33□□□□□ -0.92
SNX3-202ENST00000349379 MT1XP80297 61 aa9.3□□□□□ -0.92
SNX3-202ENST00000349379 CYSTM1Q9H1C7 97 aa9.29□□□□□ -0.92
SNX3-202ENST00000349379 MUC12Q9UKN1 5478 aa9.28□□□□□ -0.92
SNX3-202ENST00000349379 H7BZZ5 65 aa9.28□□□□□ -0.92
SNX3-202ENST00000349379 COA5Q86WW8 74 aa9.27□□□□□ -0.93
SNX3-202ENST00000349379 PRO2289Q9P1D8 64 aa9.25□□□□□ -0.93
SNX3-202ENST00000349379 KRTAP20-1Q3LI63 56 aa9.24□□□□□ -0.93
SNX3-202ENST00000349379 LINC01554Q52M75 96 aa9.24□□□□□ -0.93
SNX3-202ENST00000349379 ANAPC13Q9BS18 74 aa9.17□□□□□ -0.94
SNX3-202ENST00000349379 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
SNX3-202ENST00000349379 KRTAP5-9P26371 169 aa9.08□□□□□ -0.96
SNX3-202ENST00000349379 KRTAP12-2P59991 146 aa9.05□□□□□ -0.96
SNX3-202ENST00000349379 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
SNX3-202ENST00000349379 SEC61GP60059 68 aa8.97□□□□□ -0.97
SNX3-202ENST00000349379 SERP1Q9Y6X1 66 aa8.96□□□□□ -0.98
SNX3-202ENST00000349379 KMT2DO14686 5537 aa8.94□□□□□ -0.98
SNX3-202ENST00000349379 ATP5EP56381 51 aaPredicted RBP8.86□□□□□ -0.99
SNX3-202ENST00000349379 KRTAP10-7P60409 375 aaPredicted RBP8.86□□□□□ -0.99
SNX3-202ENST00000349379 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
SNX3-202ENST00000349379 A0A1B0GU33 70 aa8.84□□□□□ -0.99
SNX3-202ENST00000349379 MDN1Q9NU22 5596 aa8.84□□□□□ -0.99
SNX3-202ENST00000349379 KRTAP8-1Q8IUC2 63 aa8.83□□□□□ -1
SNX3-202ENST00000349379 KRTAP4-8A0A0G2JLE6 195 aa8.81□□□□□ -1
SNX3-202ENST00000349379 KRTAP4-8Q9BYQ9 185 aa8.81□□□□□ -1
SNX3-202ENST00000349379 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
SNX3-202ENST00000349379 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
SNX3-202ENST00000349379 A0A1B0GU69 56 aa8.77□□□□□ -1.01
SNX3-202ENST00000349379 LOC100996750A0A140TA64 210 aa8.76□□□□□ -1.01
SNX3-202ENST00000349379 KRTAP4-6Q9BYQ5 205 aa8.76□□□□□ -1.01
SNX3-202ENST00000349379 A0A0D9SG42 100 aa8.75□□□□□ -1.01
SNX3-202ENST00000349379 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
SNX3-202ENST00000349379 TMEM258P61165 79 aa8.7□□□□□ -1.02
SNX3-202ENST00000349379 KRTAP2-3P0C7H8 128 aa8.69□□□□□ -1.02
SNX3-202ENST00000349379 KRTAP2-4Q9BYR9 128 aa8.69□□□□□ -1.02
SNX3-202ENST00000349379 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
SNX3-202ENST00000349379 SPRR2EP22531 72 aa8.61□□□□□ -1.03
SNX3-202ENST00000349379 SPRR2BP35325 72 aa8.61□□□□□ -1.03
SNX3-202ENST00000349379 SPRR2AP35326 72 aa8.61□□□□□ -1.03
SNX3-202ENST00000349379 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
SNX3-202ENST00000349379 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
SNX3-202ENST00000349379 LCE1AQ5T7P2 110 aa8.58□□□□□ -1.04
SNX3-202ENST00000349379 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
SNX3-202ENST00000349379 GPR98Q8WXG9 6306 aa8.57□□□□□ -1.04
SNX3-202ENST00000349379 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
SNX3-202ENST00000349379 A8MU10 97 aa8.53□□□□□ -1.04
SNX3-202ENST00000349379 KRTAP2-2Q9BYT5 123 aa8.35□□□□□ -1.07
SNX3-202ENST00000349379 KRTAP2-1Q9BYU5 128 aa8.35□□□□□ -1.07
SNX3-202ENST00000349379 KRTAP19-7Q3SYF9 63 aa8.33□□□□□ -1.08
SNX3-202ENST00000349379 SPRR2DP22532 72 aa8.31□□□□□ -1.08
SNX3-202ENST00000349379 UQCR11O14957 56 aa8.3□□□□□ -1.08
SNX3-202ENST00000349379 PCP4P48539 62 aa8.26□□□□□ -1.09
SNX3-202ENST00000349379 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
SNX3-202ENST00000349379 MT1EP04732 61 aa8.23□□□□□ -1.09
SNX3-202ENST00000349379 V9GYY9 64 aa8.17□□□□□ -1.1
SNX3-202ENST00000349379 TNP1P09430 55 aa8.15□□□□□ -1.1
SNX3-202ENST00000349379 Q1T7F1 81 aa8.15□□□□□ -1.1
SNX3-202ENST00000349379 KRTAP19-5Q3LI72 72 aa8.13□□□□□ -1.11
SNX3-202ENST00000349379 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
SNX3-202ENST00000349379 LCE5AQ5TCM9 118 aa8.12□□□□□ -1.11
SNX3-202ENST00000349379 KRTAP19-3Q7Z4W3 81 aa8.1□□□□□ -1.11
SNX3-202ENST00000349379 LCE3BQ5TA77 95 aa8.09□□□□□ -1.11
SNX3-202ENST00000349379 PSPHP1O15172 72 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms