RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 DMBT1Q9UGM3 2413 aaPredicted RBP11.48□□□□□ -0.57
PTPN18-202ENST00000347849 C20orf166-AS1Q96NR2 134 aa11.43□□□□□ -0.58
PTPN18-202ENST00000347849 A8MUU9 505 aa11.42□□□□□ -0.58
PTPN18-202ENST00000347849 H0YAA0 97 aa11.37□□□□□ -0.59
PTPN18-202ENST00000347849 MT1HL1P0DM35 61 aa11.37□□□□□ -0.59
PTPN18-202ENST00000347849 KRTAP3-1Q9BYR8 98 aa11.32□□□□□ -0.6
PTPN18-202ENST00000347849 KRTAP4-5Q9BYR2 181 aa11.31□□□□□ -0.6
PTPN18-202ENST00000347849 A0A1B0GU33 70 aa11.29□□□□□ -0.6
PTPN18-202ENST00000347849 H1FX-AS1Q4G0G2 97 aa11.21□□□□□ -0.61
PTPN18-202ENST00000347849 ABCA13Q86UQ4 5058 aa11.18□□□□□ -0.62
PTPN18-202ENST00000347849 XP32Q5T750 250 aa11.14□□□□□ -0.63
PTPN18-202ENST00000347849 KRTAP25-1Q3LHN0 102 aa11.1□□□□□ -0.63
PTPN18-202ENST00000347849 RPL37P61927 97 aaKnown RBP11.08□□□□□ -0.64
PTPN18-202ENST00000347849 COX6B2Q6YFQ2 88 aa11.04□□□□□ -0.64
PTPN18-202ENST00000347849 LPAP08519 4548 aa11.04□□□□□ -0.64
PTPN18-202ENST00000347849 LRP2P98164 4655 aa11.03□□□□□ -0.64
PTPN18-202ENST00000347849 CRIPTQ9P021 101 aa11□□□□□ -0.65
PTPN18-202ENST00000347849 K7ERS5 55 aa10.98□□□□□ -0.65
PTPN18-202ENST00000347849 HERC2O95714 4834 aa10.98□□□□□ -0.65
PTPN18-202ENST00000347849 BIRC6Q9NR09 4857 aa10.91□□□□□ -0.66
PTPN18-202ENST00000347849 TPRXLQ17RH7 258 aa10.87□□□□□ -0.67
PTPN18-202ENST00000347849 ROMO1P60602 79 aa10.85□□□□□ -0.67
PTPN18-202ENST00000347849 KRTAP10-6P60371 365 aaPredicted RBP10.82□□□□□ -0.68
PTPN18-202ENST00000347849 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
PTPN18-202ENST00000347849 A0A0D9SG42 100 aa10.78□□□□□ -0.68
PTPN18-202ENST00000347849 KRTAP13-4Q3LI77 160 aa10.77□□□□□ -0.69
PTPN18-202ENST00000347849 J3QL48 77 aa10.75□□□□□ -0.69
PTPN18-202ENST00000347849 KRTAP3-2Q9BYR7 98 aa10.71□□□□□ -0.69
PTPN18-202ENST00000347849 S4R3F8 94 aa10.65□□□□□ -0.7
PTPN18-202ENST00000347849 PCLOQ9Y6V0 5065 aa10.62□□□□□ -0.71
PTPN18-202ENST00000347849 P0C880 135 aa10.6□□□□□ -0.71
PTPN18-202ENST00000347849 HERC1Q15751 4861 aa10.54□□□□□ -0.72
PTPN18-202ENST00000347849 MUC17Q685J3 4493 aa10.51□□□□□ -0.73
PTPN18-202ENST00000347849 C10orf95Q9H7T3 257 aa10.51□□□□□ -0.73
PTPN18-202ENST00000347849 KRTAP4-1Q9BYQ7 146 aa10.5□□□□□ -0.73
PTPN18-202ENST00000347849 KRTAP12-2P59991 146 aa10.46□□□□□ -0.74
PTPN18-202ENST00000347849 SPINT4Q6UDR6 99 aa10.46□□□□□ -0.74
PTPN18-202ENST00000347849 SEC61BP60468 96 aaKnown RBP10.44□□□□□ -0.74
PTPN18-202ENST00000347849 MUC2Q02817 5179 aa10.42□□□□□ -0.74
PTPN18-202ENST00000347849 HMCN2Q8NDA2 5059 aa10.34□□□□□ -0.75
PTPN18-202ENST00000347849 KRTAP12-1P59990 96 aa10.33□□□□□ -0.76
PTPN18-202ENST00000347849 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
PTPN18-202ENST00000347849 KRTAP15-1Q3LI76 137 aa10.18□□□□□ -0.78
PTPN18-202ENST00000347849 M0QZ58 72 aa10.18□□□□□ -0.78
PTPN18-202ENST00000347849 NDUFAF8A1L188 74 aa10.13□□□□□ -0.79
PTPN18-202ENST00000347849 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
PTPN18-202ENST00000347849 FLGP20930 4061 aaPredicted RBP9.95□□□□□ -0.82
PTPN18-202ENST00000347849 R4GN34 69 aa9.94□□□□□ -0.82
PTPN18-202ENST00000347849 FAT4Q6V0I7 4981 aa9.93□□□□□ -0.82
PTPN18-202ENST00000347849 RNF213Q63HN8 5207 aa9.93□□□□□ -0.82
PTPN18-202ENST00000347849 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
PTPN18-202ENST00000347849 A0A0A0MQY5 61 aa9.87□□□□□ -0.83
PTPN18-202ENST00000347849 LCE2CQ5TA81 110 aa9.81□□□□□ -0.84
PTPN18-202ENST00000347849 PLAC4Q8WY50 150 aa9.64□□□□□ -0.87
PTPN18-202ENST00000347849 MT1HP80294 61 aa9.55□□□□□ -0.88
PTPN18-202ENST00000347849 CAMK2N1Q7Z7J9 78 aa9.48□□□□□ -0.89
PTPN18-202ENST00000347849 M0R2T5 61 aa9.47□□□□□ -0.89
PTPN18-202ENST00000347849 LUZP6Q538Z0 58 aa9.46□□□□□ -0.89
PTPN18-202ENST00000347849 PP632Q6XCG6 107 aa9.39□□□□□ -0.91
PTPN18-202ENST00000347849 MT2AP02795 61 aa9.27□□□□□ -0.93
PTPN18-202ENST00000347849 MT1FP04733 61 aa9.27□□□□□ -0.93
PTPN18-202ENST00000347849 KRTAP9-8Q9BYQ0 159 aa9.27□□□□□ -0.93
PTPN18-202ENST00000347849 KRTAP19-1Q8IUB9 90 aa9.25□□□□□ -0.93
PTPN18-202ENST00000347849 SPRR2GQ9BYE4 73 aa9.2□□□□□ -0.94
PTPN18-202ENST00000347849 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
PTPN18-202ENST00000347849 TNP1P09430 55 aa9.13□□□□□ -0.95
PTPN18-202ENST00000347849 KRTAP23-1A1A580 65 aa8.96□□□□□ -0.97
PTPN18-202ENST00000347849 KRTAP9-3Q9BYQ3 159 aa8.9□□□□□ -0.99
PTPN18-202ENST00000347849 KRTAP19-8Q3LI54 63 aa8.88□□□□□ -0.99
PTPN18-202ENST00000347849 SPRR5A0A1B0GTR4 108 aa8.85□□□□□ -0.99
PTPN18-202ENST00000347849 MT1BP07438 61 aa8.85□□□□□ -0.99
PTPN18-202ENST00000347849 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
PTPN18-202ENST00000347849 LCE2BO14633 110 aa8.65□□□□□ -1.02
PTPN18-202ENST00000347849 KRTAP10-5P60370 271 aa8.65□□□□□ -1.02
PTPN18-202ENST00000347849 MT1XP80297 61 aa8.65□□□□□ -1.02
PTPN18-202ENST00000347849 USH2AO75445 5202 aa8.65□□□□□ -1.02
PTPN18-202ENST00000347849 LCE3AQ5TA76 89 aa8.63□□□□□ -1.03
PTPN18-202ENST00000347849 KRTAP10-7P60409 375 aaPredicted RBP8.4□□□□□ -1.07
PTPN18-202ENST00000347849 KRTAP8-1Q8IUC2 63 aa8.36□□□□□ -1.07
PTPN18-202ENST00000347849 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
PTPN18-202ENST00000347849 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
PTPN18-202ENST00000347849 KMT2DO14686 5537 aa8.22□□□□□ -1.09
PTPN18-202ENST00000347849 KRTAP12-3P60328 96 aa8.2□□□□□ -1.1
PTPN18-202ENST00000347849 FSIP2Q5CZC0 6907 aa8.19□□□□□ -1.1
PTPN18-202ENST00000347849 SSPOA2VEC9 5147 aa8.14□□□□□ -1.11
PTPN18-202ENST00000347849 KRTAP4-8A0A0G2JLE6 195 aa8.04□□□□□ -1.12
PTPN18-202ENST00000347849 INE1O15225 51 aa8.04□□□□□ -1.12
PTPN18-202ENST00000347849 KRTAP4-8Q9BYQ9 185 aa8.04□□□□□ -1.12
PTPN18-202ENST00000347849 KRTAP19-5Q3LI72 72 aa7.93□□□□□ -1.14
PTPN18-202ENST00000347849 KRTAP19-6Q3LI70 58 aa7.87□□□□□ -1.15
PTPN18-202ENST00000347849 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
PTPN18-202ENST00000347849 KRTAP19-7Q3SYF9 63 aa7.73□□□□□ -1.17
PTPN18-202ENST00000347849 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
PTPN18-202ENST00000347849 FCGBPQ9Y6R7 5405 aaPredicted RBP7.7□□□□□ -1.18
PTPN18-202ENST00000347849 MT1EP04732 61 aa7.52□□□□□ -1.21
PTPN18-202ENST00000347849 KRTAP9-6A8MVA2 160 aa7.51□□□□□ -1.21
PTPN18-202ENST00000347849 KRTAP4-7Q9BYR0 210 aa7.48□□□□□ -1.21
PTPN18-202ENST00000347849 MT1LQ93083 61 aa7.43□□□□□ -1.22
PTPN18-202ENST00000347849 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
PTPN18-202ENST00000347849 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms